RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 KRT71Q3SY84 523 aa9.78□□□□□ -0.84
SHROOM4-202ENST00000376020 CAPN7Q9Y6W3 813 aa9.78□□□□□ -0.84
SHROOM4-202ENST00000376020 TARBP1Q13395 1621 aaKnown RBP9.78□□□□□ -0.84
SHROOM4-202ENST00000376020 TSPY2A6NKD2 308 aa9.78□□□□□ -0.84
SHROOM4-202ENST00000376020 PPP1R21Q6ZMI0 780 aa9.78□□□□□ -0.84
SHROOM4-202ENST00000376020 VSIG1Q86XK7 387 aa9.78□□□□□ -0.84
SHROOM4-202ENST00000376020 NOC4LQ9BVI4 516 aaKnown RBP9.78□□□□□ -0.84
SHROOM4-202ENST00000376020 CCDC8Q9H0W5 538 aaPredicted RBP9.78□□□□□ -0.84
SHROOM4-202ENST00000376020 PNMA2Q9UL42 364 aa9.78□□□□□ -0.84
SHROOM4-202ENST00000376020 N4BP1O75113 896 aaKnown RBP9.78□□□□□ -0.84
SHROOM4-202ENST00000376020 TMOD3Q9NYL9 352 aa9.78□□□□□ -0.84
SHROOM4-202ENST00000376020 MINDY4BA8MYZ0 360 aa9.77□□□□□ -0.84
SHROOM4-202ENST00000376020 SPATA1Q5VX52 437 aa9.77□□□□□ -0.84
SHROOM4-202ENST00000376020 APBB1IPQ7Z5R6 666 aaPredicted RBP9.77□□□□□ -0.84
SHROOM4-202ENST00000376020 FBXO18Q8NFZ0 1043 aa9.77□□□□□ -0.84
SHROOM4-202ENST00000376020 IFT81Q8WYA0 676 aa9.77□□□□□ -0.84
SHROOM4-202ENST00000376020 PPP1R13BQ96KQ4 1090 aa9.77□□□□□ -0.84
SHROOM4-202ENST00000376020 ABCF2Q9UG63 623 aa9.77□□□□□ -0.84
SHROOM4-202ENST00000376020 MTMR6Q9Y217 621 aa9.77□□□□□ -0.84
SHROOM4-202ENST00000376020 USP19O94966 1318 aa9.77□□□□□ -0.84
SHROOM4-202ENST00000376020 B4DLN1 442 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 TROVE2P10155 538 aaKnown RBP eCLIP9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 MRPL12P52815 198 aaKnown RBP9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 GMNNO75496 209 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 LDHAL6AQ6ZMR3 332 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 SIRT1Q96EB6 747 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 NCAPGQ9BPX3 1015 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 CTTNBP2NLQ9P2B4 639 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 PUF60Q9UHX1 559 aaKnown RBP9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 MACROD2A1Z1Q3 448 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 CTNNA1P35221 906 aaKnown RBP9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 ANKRD20A3Q5VUR7 823 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 CSGALNACT2Q8N6G5 542 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 NECAB1Q8N987 351 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 PRDM11Q9NQV5 511 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 DDX21Q9NR30 783 aaKnown RBP eCLIP9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 IGSF3O75054 1194 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 ALDH8A1Q9H2A2 487 aaPredicted RBP9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 NCOA3Q9Y6Q9 1424 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 NEO1Q92859 1461 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 ATP10DQ9P241 1426 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 A0A1B0GVL5 298 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 CALUO43852 315 aaPredicted RBP9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 LMNB1P20700 586 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 MARCKSP29966 332 aaPredicted RBP9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 CCDC197Q8NCU1 140 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 MICAL1Q8TDZ2 1067 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 TRIM6Q9C030 488 aaPredicted RBP9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 FGFR1OP2Q9NVK5 253 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 STMN1P16949 149 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 ARHGAP18Q8N392 663 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 HAUS2Q9NVX0 235 aa9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 RPAP1Q9BWH6 1393 aaPredicted RBP9.77□□□□□ -0.85
SHROOM4-202ENST00000376020 PLCB4Q15147 1175 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 RBM42Q9BTD8 480 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 CETN3O15182 167 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 NEBLO76041 1014 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 ORC2Q13416 577 aaPredicted RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 C8orf58Q8NAV2 365 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 MIS12Q9H081 205 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 NCAPD2Q15021 1401 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 CFAP73A6NFT4 308 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 MYO1CO00159 1063 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 VIMP08670 466 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 NOSTRINQ8IVI9 506 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 DRC1Q96MC2 740 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 CRACR2BQ8N4Y2 399 aaPredicted RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 METTL14Q9HCE5 456 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 NOC2LQ9Y3T9 749 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 EFCAB6Q5THR3 1501 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 IRX1P78414 480 aaPredicted RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 TTLL7Q6ZT98 887 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 NME9Q86XW9 330 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 MMRN2Q9H8L6 949 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 E7EVH7 732 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 IDI1Q13907 227 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 ARHGEF25Q86VW2 580 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 KDRP35968 1356 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 ABCC12Q96J65 1359 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 hCG_1984214I3L0E3 225 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 AFMP43652 599 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 DYNC1I2Q13409 638 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 PDCD2Q16342 344 aaPredicted RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 ZNF713Q8N859 430 aaPredicted RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 SYTL4Q96C24 671 aaPredicted RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 SELENOSQ9BQE4 189 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 TRIM4Q9C037 500 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 FAM204AQ9H8W3 233 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 MYH9P35579 1960 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 CTIFO43310 598 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 MUM1Q2TAK8 710 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 NBPF20Q3BBV1 942 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 LIN9Q5TKA1 542 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 KRT25Q7Z3Z0 450 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 MYD88Q99836 296 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 FOXP1Q9H334 677 aaPredicted RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 GEMIN8Q9NWZ8 242 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 RCOR1Q9UKL0 485 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 PXDNLA1KZ92 1463 aa9.76□□□□□ -0.85
SHROOM4-202ENST00000376020 HECW2Q9P2P5 1572 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms