RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ST7Q9NRC1 585 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 NEDD4P46934 1319 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 GOLGA6L10A0A0M3HER8 536 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 CLCN6P51797 869 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 TBC1D8BQ0IIM8 1120 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 CCDC121Q6ZUS5 278 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 EEF2KMTQ96G04 330 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 WWC3Q9ULE0 1092 aa7.34□□□□□ -1.23
SMC1A-202ENST00000375340 CASP14P31944 242 aa7.34□□□□□ -1.24
SMC1A-202ENST00000375340 PHKA1P46020 1223 aa7.34□□□□□ -1.24
SMC1A-202ENST00000375340 TRIM14Q14142 442 aa7.34□□□□□ -1.24
SMC1A-202ENST00000375340 ADGRB1O14514 1584 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 CHMP2AO43633 222 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 LDHBP07195 334 aaKnown RBP7.33□□□□□ -1.24
SMC1A-202ENST00000375340 GUCY2FP51841 1108 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 KLHL7Q8IXQ5 586 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 SELENOOQ9BVL4 669 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 PRKAB2O43741 272 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 TNIP1Q15025 636 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 SLF2Q8IX21 1173 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 OSBP2Q969R2 916 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 ZBTB21Q9ULJ3 1066 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 MROH5Q6ZUA9 1318 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 BUB1O43683 1085 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 CLEC17AQ6ZS10 378 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 FAM207AQ9NSI2 230 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-202ENST00000375340 FRMPD2Q68DX3 1309 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-202ENST00000375340 GOLGA6BA6NDN3 693 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 EFCAB8A8MWE9 144 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 LPIN2Q92539 896 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 KIF23Q02241 960 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-202ENST00000375340 C8orf74Q6P047 294 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 CCDC25Q86WR0 208 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 PDLIM2Q96JY6 352 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 CEP170BQ9Y4F5 1589 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-202ENST00000375340 KRT9P35527 623 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 C2orf54Q08AI8 447 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 FMNL1O95466 1100 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-202ENST00000375340 PRR29P0C7W0 189 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 GYG1P46976 350 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 CADPS2Q86UW7 1296 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 LRRC27Q9C0I9 530 aa7.33□□□□□ -1.24
SMC1A-202ENST00000375340 TRAF5O00463 557 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 ST5P78524 1137 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 IFI16Q16666 785 aaKnown RBP7.32□□□□□ -1.24
SMC1A-202ENST00000375340 CEP57Q86XR8 500 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 TRIM31Q9BZY9 425 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 ASIC2Q16515 512 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 ZSCAN26Q16670 478 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 NELFCDQ8IXH7 590 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 EPC1Q9H2F5 836 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 SAMSN1Q9NSI8 373 aaKnown RBP7.32□□□□□ -1.24
SMC1A-202ENST00000375340 KIF28PB7ZC32 967 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 TGFBRAP1Q8WUH2 860 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 RASAL2Q9UJF2 1139 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 DENND2AQ9ULE3 1009 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 PHLPP2Q6ZVD8 1323 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 EBAG9O00559 213 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 RPN1P04843 607 aaKnown RBP7.32□□□□□ -1.24
SMC1A-202ENST00000375340 PTPN12Q05209 780 aaKnown RBP7.32□□□□□ -1.24
SMC1A-202ENST00000375340 LINC00301Q8NCQ3 95 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 BICD1Q96G01 975 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 LSM14BQ9BX40 385 aaKnown RBP7.32□□□□□ -1.24
SMC1A-202ENST00000375340 C19orf44Q9H6X5 657 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 SH2B2O14492 632 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-202ENST00000375340 KRT79Q5XKE5 535 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 CNNM4Q6P4Q7 775 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 CABP7Q86V35 215 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 ERMNQ8TAM6 284 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 POLR3EQ9NVU0 708 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 HLA-DOAP06340 250 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 GOLGA8HP0CJ92 632 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 KIAA0753Q2KHM9 967 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 TMTC1Q8IUR5 882 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 SPTLC3Q9NUV7 552 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 B4DLN1 442 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 FAM13AO94988 1023 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 RBM6P78332 1123 aaKnown RBP7.32□□□□□ -1.24
SMC1A-202ENST00000375340 NBPF14Q5TI25 921 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 SND1Q7KZF4 910 aaKnown RBP eCLIP7.32□□□□□ -1.24
SMC1A-202ENST00000375340 OTUD6BQ8N6M0 293 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.32□□□□□ -1.24
SMC1A-202ENST00000375340 A0A1W2PQ27 194 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 A0A1W2PQ64 194 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 A0A1W2PQD8 194 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 CASP1P29466 404 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 HSPA2P54652 639 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 NR5A1Q13285 461 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 C2CD5Q86YS7 1000 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 CCDC50Q8IVM0 306 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 SLC35F6Q8N357 371 aa7.32□□□□□ -1.24
SMC1A-202ENST00000375340 A0A0G2JLW4 131 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 NF2P35240 595 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 ZRSR2Q15696 482 aaKnown RBP7.31□□□□□ -1.24
SMC1A-202ENST00000375340 RRAGAQ7L523 313 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 COPRSQ9NQ92 184 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 INF2Q27J81 1249 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 CYB5R4Q7L1T6 521 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 MAPKAPK5Q8IW41 473 aa7.31□□□□□ -1.24
SMC1A-202ENST00000375340 IFIH1Q9BYX4 1025 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms