RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 AP4S1Q9Y587 144 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 DNA2P51530 1060 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 TUBA1BP68363 451 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 AP1B1Q10567 949 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 KARSQ15046 597 aaKnown RBP7.29□□□□□ -1.24
UBR4-204ENST00000375254 SEL1L2Q5TEA6 688 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 TUBA1AQ71U36 451 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 HELLSQ9NRZ9 838 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 RNF123Q5XPI4 1314 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 SERPINB4P48594 390 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 SNX16P57768 344 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 MBD2Q9UBB5 411 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 SEC63Q9UGP8 760 aaKnown RBP7.29□□□□□ -1.24
UBR4-204ENST00000375254 H7C1D1 291 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 VIL1P09327 827 aaKnown RBP7.29□□□□□ -1.24
UBR4-204ENST00000375254 ERMNQ8TAM6 284 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 ABCF3Q9NUQ8 709 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 UBAP1Q9NZ09 502 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 DEAF1O75398 565 aaPredicted RBP7.29□□□□□ -1.24
UBR4-204ENST00000375254 KBTBD12Q3ZCT8 623 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 TMEM259Q4ZIN3 620 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 PRDM4Q9UKN5 801 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 TRIM75PA6NK02 468 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 KRT13P13646 458 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 TUBA3EQ6PEY2 450 aa7.29□□□□□ -1.24
UBR4-204ENST00000375254 SPAG7O75391 227 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 CWF19L2Q2TBE0 894 aaKnown RBP7.28□□□□□ -1.24
UBR4-204ENST00000375254 BAG5Q9UL15 447 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 SYCE1LA8MT33 242 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 SASH1O94885 1247 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 ENOX1Q8TC92 643 aaKnown RBP7.28□□□□□ -1.24
UBR4-204ENST00000375254 HSPA6P17066 643 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 LRRC37BQ96QE4 947 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 ATP6V0A4Q9HBG4 840 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 SLFN14P0C7P3 912 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 KCNJ6P48051 423 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 DAB2IPQ5VWQ8 1189 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 CEP70Q8NHQ1 597 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 ARHGAP26Q9UNA1 814 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 SMIM23A6NLE4 172 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 NUP107P57740 925 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 ESCO1Q5FWF5 840 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 THAP11Q96EK4 314 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 SDSP20132 328 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 TTC5Q8N0Z6 440 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 ESYT1Q9BSJ8 1104 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 KRT9P35527 623 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 CEP19Q96LK0 163 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 MRPS15P82914 257 aaKnown RBP7.28□□□□□ -1.24
UBR4-204ENST00000375254 E2F5Q15329 346 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 GPRASP1Q5JY77 1395 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 NDE1Q9NXR1 346 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 POLR2EP19388 210 aaKnown RBP7.28□□□□□ -1.24
UBR4-204ENST00000375254 RAB15P59190 212 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 CCDC153Q494R4 210 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 DCTPP1Q9H773 170 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 R3HDM2Q9Y2K5 976 aaKnown RBP7.28□□□□□ -1.24
UBR4-204ENST00000375254 SGSM2O43147 1006 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 ZNF202O95125 648 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 DEFA1P59665 94 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 DEFA3P59666 94 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 MAGEA13PA6NCF6 341 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 ANGPT1Q15389 498 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 HORMAD1Q86X24 394 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 SH3GL1Q99961 368 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 KLC3Q6P597 504 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 KIAA2013Q8IYS2 634 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 ZRANB1Q9UGI0 708 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 HYOU1Q9Y4L1 999 aa7.28□□□□□ -1.24
UBR4-204ENST00000375254 RRBP1Q9P2E9 1410 aaKnown RBP7.28□□□□□ -1.24
UBR4-204ENST00000375254 NLRP9Q7RTR0 991 aa7.27□□□□□ -1.24
UBR4-204ENST00000375254 SRRM1Q8IYB3 904 aaKnown RBP7.27□□□□□ -1.24
UBR4-204ENST00000375254 HNRNPLLQ8WVV9 542 aaKnown RBP7.27□□□□□ -1.24
UBR4-204ENST00000375254 CTNND1O60716 968 aaKnown RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 ERCC5P28715 1186 aaPredicted RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 COPB1P53618 953 aaKnown RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 CDR2Q01850 454 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 TUBGCP3Q96CW5 907 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 TMEM191CA6NGB0 347 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 GYG2O15488 501 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 TMEM191BP0C7N4 346 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 HMGB2P26583 209 aaKnown RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 KIF23Q02241 960 aaPredicted RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 KRT72Q14CN4 511 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 ICA1LQ8NDH6 482 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 PPP1R13BQ96KQ4 1090 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 BHMT2Q9H2M3 363 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 DIS3Q9Y2L1 958 aaKnown RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 ADALQ6DHV7 355 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 GRK7Q8WTQ7 553 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 MIEF2Q96C03 454 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 CNNM2Q9H8M5 875 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 EPN1Q9Y6I3 576 aaPredicted RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 POLR3DP05423 398 aaPredicted RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 KRT15P19012 456 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 UACAQ9BZF9 1416 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 TRIM27P14373 513 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 RPS6KA2Q15349 733 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 STRN3Q13033 797 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 ATP2B3Q16720 1220 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms