RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 CYP2E1P05181 493 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 CAP2P40123 477 aa13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 GCLCP48506 637 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 RBM25P49756 843 aaKnown RBP13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 GSTO1P78417 241 aa13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 ZSCAN25Q6NSZ9 544 aa13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 KIAA1211Q6ZU35 1233 aa13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 TEX11Q8IYF3 940 aa13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 TRIB2Q92519 343 aa13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 ANTXR1Q9H6X2 564 aa13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 RAI14Q9P0K7 980 aa13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 MYO5AQ9Y4I1 1855 aaKnown RBP13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 FRMPD3Q5JV73 1810 aa13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 USP17L5A8MUK1 530 aa13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 ZFYP08048 801 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 PABPC4Q13310 644 aaKnown RBP eCLIP13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 MTMR2Q13614 643 aa13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 SHROOM1Q2M3G4 852 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 SLC17A8Q8NDX2 589 aa13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 SH3RF3Q8TEJ3 882 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 FAM227BQ96M60 508 aa13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 ANO2Q9NQ90 1003 aa13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 HELLSQ9NRZ9 838 aa13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 RAD50Q92878 1312 aa13.05□□□□□ -0.32
HLA-DQA1-202ENST00000374949 LDHCP07864 332 aa13.04□□□□□ -0.32
HLA-DQA1-202ENST00000374949 SYN1P17600 705 aa13.04□□□□□ -0.32
HLA-DQA1-202ENST00000374949 CAPN2P17655 700 aa13.04□□□□□ -0.32
HLA-DQA1-202ENST00000374949 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQA1-202ENST00000374949 IRX3P78415 501 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQA1-202ENST00000374949 MCMDC2Q4G0Z9 681 aa13.04□□□□□ -0.32
HLA-DQA1-202ENST00000374949 ANKLE1Q8NAG6 615 aa13.04□□□□□ -0.32
HLA-DQA1-202ENST00000374949 GDF15Q99988 308 aa13.04□□□□□ -0.32
HLA-DQA1-202ENST00000374949 AS3MTQ9HBK9 375 aa13.04□□□□□ -0.32
HLA-DQA1-202ENST00000374949 MORF4L1Q9UBU8 362 aa13.04□□□□□ -0.32
HLA-DQA1-202ENST00000374949 GJD2Q9UKL4 321 aa13.04□□□□□ -0.32
HLA-DQA1-202ENST00000374949 DLL1O00548 723 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 CYP2B6P20813 491 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 MCCP23508 829 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 JAG1P78504 1218 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 SH3D19Q5HYK7 790 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 ZMYM1Q5SVZ6 1142 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 MAPKAPK5Q8IW41 473 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 TBC1D2Q9BYX2 928 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 IL25Q9H293 177 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 C11orf49Q9H6J7 331 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 DNAJC18Q9H819 358 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 TXNRD2Q9NNW7 524 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 HMX1Q9NP08 348 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 PIH1D3Q9NQM4 214 aaKnown RBP13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 AATFQ9NY61 560 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 LRP2BPQ9P2M1 347 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 HERC5Q9UII4 1024 aaKnown RBP13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 RPTORQ8N122 1335 aa13.03□□□□□ -0.32
HLA-DQA1-202ENST00000374949 COL6A3P12111 3177 aa13.02□□□□□ -0.32
HLA-DQA1-202ENST00000374949 A0A0D9SFI3 127 aa13.02□□□□□ -0.33
HLA-DQA1-202ENST00000374949 GDF11O95390 407 aa13.02□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PRKAR2AP13861 404 aaKnown RBP13.02□□□□□ -0.33
HLA-DQA1-202ENST00000374949 MAP3K12Q12852 859 aa13.02□□□□□ -0.33
HLA-DQA1-202ENST00000374949 ADGRA1Q86SQ6 560 aa13.02□□□□□ -0.33
HLA-DQA1-202ENST00000374949 DDRGK1Q96HY6 314 aa13.02□□□□□ -0.33
HLA-DQA1-202ENST00000374949 LSG1Q9H089 658 aaKnown RBP13.02□□□□□ -0.33
HLA-DQA1-202ENST00000374949 TMOD4Q9NZQ9 345 aa13.02□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PFASO15067 1338 aa13.02□□□□□ -0.33
HLA-DQA1-202ENST00000374949 FLT1P17948 1338 aa13.02□□□□□ -0.33
HLA-DQA1-202ENST00000374949 IDH1O75874 414 aaKnown RBP13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 MAGEA10P43363 369 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 BACE1P56817 501 aa13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 HERVK_113P62684 666 aa13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 UBE3CQ15386 1083 aa13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 SLC9C2Q5TAH2 1124 aa13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 MAP3K21Q5TCX8 1036 aa13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 Q7L0L9 218 aa13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 P2RX7Q99572 595 aaKnown RBP13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 NOL10Q9BSC4 688 aaKnown RBP13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 WDR18Q9BV38 432 aa13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PI4KBQ9UBF8 816 aa13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 OGDHLQ9ULD0 1010 aa13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 MYH1P12882 1939 aa13.01□□□□□ -0.33
HLA-DQA1-202ENST00000374949 ASNSP08243 561 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 ZKSCAN1P17029 563 aaPredicted RBP13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 BMP8BP34820 402 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 ADD2P35612 726 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PTH1RQ03431 593 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 NAA16Q6N069 864 aaPredicted RBP13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 GPRC5AQ8NFJ5 357 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 TGFBRAP1Q8WUH2 860 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 SOCS4Q8WXH5 440 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 APPBP2Q92624 585 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 MAP4K1Q92918 833 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 SEC62Q99442 399 aaKnown RBP13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 NUDT12Q9BQG2 462 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PAGR1Q9BTK6 254 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 TRIM34Q9BYJ4 488 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 SAP30BPQ9UHR5 308 aaKnown RBP13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
HLA-DQA1-202ENST00000374949 CCDC171Q6TFL3 1326 aa12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 IGSF3O75054 1194 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms