RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 CCDC152Q4G0S7 254 aa12.63□□□□□ -0.39
CCDC40-203ENST00000374877 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
CCDC40-203ENST00000374877 GREM2Q9H772 168 aa12.63□□□□□ -0.39
CCDC40-203ENST00000374877 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
CCDC40-203ENST00000374877 FEZ2Q9UHY8 353 aaPredicted RBP12.63□□□□□ -0.39
CCDC40-203ENST00000374877 DACH1Q9UI36 760 aa12.63□□□□□ -0.39
CCDC40-203ENST00000374877 ADAM21Q9UKJ8 722 aa12.63□□□□□ -0.39
CCDC40-203ENST00000374877 H3BQF6 201 aa12.63□□□□□ -0.39
CCDC40-203ENST00000374877 ITGA6P23229 1130 aa12.63□□□□□ -0.39
CCDC40-203ENST00000374877 TSPYL1Q9H0U9 437 aa12.63□□□□□ -0.39
CCDC40-203ENST00000374877 CCDC151A5D8V7 595 aa12.63□□□□□ -0.39
CCDC40-203ENST00000374877 RANBP6O60518 1105 aaKnown RBP12.63□□□□□ -0.39
CCDC40-203ENST00000374877 SF3B3Q15393 1217 aaKnown RBP12.63□□□□□ -0.39
CCDC40-203ENST00000374877 SMIM5Q71RC9 77 aa12.63□□□□□ -0.39
CCDC40-203ENST00000374877 ZFP91Q96JP5 570 aaPredicted RBP12.63□□□□□ -0.39
CCDC40-203ENST00000374877 BTBD18B2RXH4 712 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 ZNF18P17022 549 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 MUM1L1Q5H9M0 696 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 SLC9C2Q5TAH2 1124 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 JAKMIP3Q5VZ66 844 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 KLHL10Q6JEL2 608 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 TPTE2Q6XPS3 522 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 CCDC82Q8N4S0 544 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 MLKLQ8NB16 471 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC40-203ENST00000374877 WDR19Q8NEZ3 1342 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 AKR1B15C9JRZ8 316 aaPredicted RBP12.62□□□□□ -0.39
CCDC40-203ENST00000374877 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
CCDC40-203ENST00000374877 TMEM67Q5HYA8 995 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 ENOX1Q8TC92 643 aaKnown RBP12.62□□□□□ -0.39
CCDC40-203ENST00000374877 INCENPQ9NQS7 918 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 VPS18Q9P253 973 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 A0A0U1RQJ8 604 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 KIF5CO60282 957 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
CCDC40-203ENST00000374877 SAFBQ15424 915 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC40-203ENST00000374877 ERFEQ4G0M1 354 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 SRGAP1Q7Z6B7 1085 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 PPFIBP1Q86W92 1011 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 NOSTRINQ8IVI9 506 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 ATRIPQ8WXE1 791 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 PDE11AQ9HCR9 933 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 KCNJ14Q9UNX9 436 aa12.62□□□□□ -0.39
CCDC40-203ENST00000374877 GYS1P13807 737 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 SSRP1Q08945 709 aaKnown RBP12.61□□□□□ -0.39
CCDC40-203ENST00000374877 BRD3Q15059 726 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
CCDC40-203ENST00000374877 CWC15Q9P013 229 aaKnown RBP12.61□□□□□ -0.39
CCDC40-203ENST00000374877 TEX33O43247 280 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 STX17P56962 302 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 KIF4BQ2VIQ3 1234 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 ZNF569Q5MCW4 686 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 DIS3L2Q8IYB7 885 aaKnown RBP12.61□□□□□ -0.39
CCDC40-203ENST00000374877 SLC20A2Q08357 652 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 NFIXQ14938 502 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 NTRK3Q16288 839 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 BICDL1Q6ZP65 573 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 C10orf67Q8IYJ2 551 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 EXOC4Q96A65 974 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 CAMKK2Q96RR4 588 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 RIPOR2Q9Y4F9 1068 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 SLC12A7Q9Y666 1083 aa12.61□□□□□ -0.39
CCDC40-203ENST00000374877 TNNT3P45378 269 aaPredicted RBP12.6□□□□□ -0.39
CCDC40-203ENST00000374877 RAD9BQ6WBX8 426 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 IGSF22Q8N9C0 903 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 ABCC12Q96J65 1359 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 IFIT3O14879 490 aaKnown RBP12.6□□□□□ -0.39
CCDC40-203ENST00000374877 RHOXF2BP0C7M4 288 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 GUCY1A2P33402 732 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 MCAMP43121 646 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 RBL2Q08999 1139 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 MORC3Q14149 939 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 NR1I3Q14994 352 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 MED15Q96RN5 788 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 RHOXF2Q9BQY4 288 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 ADGRG1Q9Y653 693 aa12.6□□□□□ -0.39
CCDC40-203ENST00000374877 TFRCP02786 760 aaKnown RBP12.59□□□□□ -0.39
CCDC40-203ENST00000374877 TM4SF1P30408 202 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 TOB1P50616 345 aaPredicted RBP12.59□□□□□ -0.39
CCDC40-203ENST00000374877 METTL24Q5JXM2 366 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 WWC2Q6AWC2 1192 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 TMEM87BQ96K49 555 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 SUGCTQ9HAC7 445 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 TOMM22Q9NS69 142 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 TFCP2L1Q9NZI6 479 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 LCMT1Q9UIC8 334 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 CDC23Q9UJX2 597 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 FBXO2Q9UK22 296 aaPredicted RBP12.59□□□□□ -0.39
CCDC40-203ENST00000374877 TRIM66O15016 1216 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 ADD2P35612 726 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 LDHAL6AQ6ZMR3 332 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 LEKR1Q6ZMV7 388 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 USP49Q70CQ1 688 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 CEP112Q8N8E3 955 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 GOLGA5Q8TBA6 731 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 IGDCC4Q8TDY8 1250 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 PNKPQ96T60 521 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 ANKZF1Q9H8Y5 726 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 LY9Q9HBG7 655 aa12.59□□□□□ -0.39
CCDC40-203ENST00000374877 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms