RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 IGF2BP3O00425 579 aaKnown RBP eCLIP20.64■□□□□ 0.89
PFDN6-201ENST00000374606 PRDM1O75626 825 aa20.64■□□□□ 0.89
PFDN6-201ENST00000374606 MCM5P33992 734 aa20.64■□□□□ 0.89
PFDN6-201ENST00000374606 NT5C2P49902 561 aa20.64■□□□□ 0.89
PFDN6-201ENST00000374606 DHX32Q7L7V1 743 aaKnown RBP20.64■□□□□ 0.89
PFDN6-201ENST00000374606 SLC44A5Q8NCS7 719 aa20.64■□□□□ 0.89
PFDN6-201ENST00000374606 MKNK2Q9HBH9 465 aa20.64■□□□□ 0.89
PFDN6-201ENST00000374606 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.64■□□□□ 0.89
PFDN6-201ENST00000374606 PPP2R3BQ9Y5P8 575 aa20.64■□□□□ 0.89
PFDN6-201ENST00000374606 SSC5DA1L4H1 1573 aa20.63■□□□□ 0.89
PFDN6-201ENST00000374606 KDM4AO75164 1064 aa20.63■□□□□ 0.89
PFDN6-201ENST00000374606 CDK8P49336 464 aa20.63■□□□□ 0.89
PFDN6-201ENST00000374606 GABPAQ06546 454 aa20.63■□□□□ 0.89
PFDN6-201ENST00000374606 CLMNQ96JQ2 1002 aa20.63■□□□□ 0.89
PFDN6-201ENST00000374606 PDRG1Q9NUG6 133 aa20.63■□□□□ 0.89
PFDN6-201ENST00000374606 PTPN22Q9Y2R2 807 aa20.63■□□□□ 0.89
PFDN6-201ENST00000374606 WDR19Q8NEZ3 1342 aa20.62■□□□□ 0.89
PFDN6-201ENST00000374606 UNCXA6NJT0 531 aa20.62■□□□□ 0.89
PFDN6-201ENST00000374606 PRC1O43663 620 aa20.62■□□□□ 0.89
PFDN6-201ENST00000374606 RANBP6O60518 1105 aaKnown RBP20.62■□□□□ 0.89
PFDN6-201ENST00000374606 COL9A3Q14050 684 aaPredicted RBP20.62■□□□□ 0.89
PFDN6-201ENST00000374606 OTUD7BQ6GQQ9 843 aa20.62■□□□□ 0.89
PFDN6-201ENST00000374606 FOXP4Q8IVH2 680 aaPredicted RBP20.62■□□□□ 0.89
PFDN6-201ENST00000374606 TCEANC2Q96MN5 208 aa20.62■□□□□ 0.89
PFDN6-201ENST00000374606 MKI67P46013 3256 aaKnown RBP20.61■□□□□ 0.89
PFDN6-201ENST00000374606 FGD1P98174 961 aa20.61■□□□□ 0.89
PFDN6-201ENST00000374606 CD99L2Q8TCZ2 262 aa20.61■□□□□ 0.89
PFDN6-201ENST00000374606 TTC14Q96N46 770 aa20.61■□□□□ 0.89
PFDN6-201ENST00000374606 HERC5Q9UII4 1024 aaKnown RBP20.61■□□□□ 0.89
PFDN6-201ENST00000374606 TSPY2A6NKD2 308 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 FAM196BA6NMK8 535 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 RASA1P20936 1047 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 SHMT1P34896 483 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 ANTXR2P58335 489 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 EXOSC10Q01780 885 aaKnown RBP20.6■□□□□ 0.89
PFDN6-201ENST00000374606 CRHR2Q13324 411 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 SUPT20HL1Q3ZLR7 823 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 CYB5R4Q7L1T6 521 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 CHST3Q7LGC8 479 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 METTL16Q86W50 562 aaKnown RBP20.6■□□□□ 0.89
PFDN6-201ENST00000374606 CDAN1Q8IWY9 1227 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 ZNF444Q8N0Y2 327 aaPredicted RBP20.6■□□□□ 0.89
PFDN6-201ENST00000374606 ARMC5Q96C12 935 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 TEPSINQ96N21 525 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 UBAC1Q9BSL1 405 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 DNAJC18Q9H819 358 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 EFCC1Q9HA90 598 aa20.6■□□□□ 0.89
PFDN6-201ENST00000374606 IREB2P48200 963 aaKnown RBP20.59■□□□□ 0.89
PFDN6-201ENST00000374606 SART3Q15020 963 aaKnown RBP20.59■□□□□ 0.89
PFDN6-201ENST00000374606 IQCA1Q86XH1 822 aa20.59■□□□□ 0.89
PFDN6-201ENST00000374606 HSCBQ8IWL3 235 aa20.59■□□□□ 0.89
PFDN6-201ENST00000374606 NKX2-3Q8TAU0 364 aa20.59■□□□□ 0.89
PFDN6-201ENST00000374606 HOOK2Q96ED9 719 aa20.59■□□□□ 0.89
PFDN6-201ENST00000374606 TMEM87BQ96K49 555 aa20.59■□□□□ 0.89
PFDN6-201ENST00000374606 LRRC2Q9BYS8 371 aa20.59■□□□□ 0.89
PFDN6-201ENST00000374606 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.59■□□□□ 0.89
PFDN6-201ENST00000374606 ZSWIM5Q9P217 1185 aa20.59■□□□□ 0.89
PFDN6-201ENST00000374606 TSPY3P0CV98 308 aa20.58■□□□□ 0.89
PFDN6-201ENST00000374606 TSPY8P0CW00 308 aa20.58■□□□□ 0.89
PFDN6-201ENST00000374606 MCM2P49736 904 aa20.58■□□□□ 0.89
PFDN6-201ENST00000374606 AK2P54819 239 aa20.58■□□□□ 0.89
PFDN6-201ENST00000374606 ANKRD1Q15327 319 aa20.58■□□□□ 0.89
PFDN6-201ENST00000374606 FAM47AQ5JRC9 791 aa20.58■□□□□ 0.89
PFDN6-201ENST00000374606 Q6ZUG5 572 aa20.58■□□□□ 0.89
PFDN6-201ENST00000374606 SNX21Q969T3 373 aa20.58■□□□□ 0.89
PFDN6-201ENST00000374606 MTA3Q9BTC8 594 aa20.58■□□□□ 0.89
PFDN6-201ENST00000374606 PLIN4Q96Q06 1357 aa20.58■□□□□ 0.88
PFDN6-201ENST00000374606 ERICH2A1L162 156 aa20.57■□□□□ 0.88
PFDN6-201ENST00000374606 TBC1D12O60347 775 aa20.57■□□□□ 0.88
PFDN6-201ENST00000374606 CD2BP2O95400 341 aaKnown RBP20.57■□□□□ 0.88
PFDN6-201ENST00000374606 SLURP2P0DP57 97 aa20.57■□□□□ 0.88
PFDN6-201ENST00000374606 TFAP4Q01664 338 aa20.57■□□□□ 0.88
PFDN6-201ENST00000374606 SP3Q02447 781 aa20.57■□□□□ 0.88
PFDN6-201ENST00000374606 BECN1Q14457 450 aa20.57■□□□□ 0.88
PFDN6-201ENST00000374606 NOL8Q76FK4 1167 aaKnown RBP20.57■□□□□ 0.88
PFDN6-201ENST00000374606 ALDH8A1Q9H2A2 487 aaPredicted RBP20.57■□□□□ 0.88
PFDN6-201ENST00000374606 GREB1LQ9C091 1923 aaPredicted RBP20.57■□□□□ 0.88
PFDN6-201ENST00000374606 TNKSO95271 1327 aa20.56■□□□□ 0.88
PFDN6-201ENST00000374606 SH2B2O14492 632 aaPredicted RBP20.56■□□□□ 0.88
PFDN6-201ENST00000374606 IFIT3O14879 490 aaKnown RBP20.56■□□□□ 0.88
PFDN6-201ENST00000374606 EN2P19622 333 aaPredicted RBP20.56■□□□□ 0.88
PFDN6-201ENST00000374606 GJA5P36382 358 aa20.56■□□□□ 0.88
PFDN6-201ENST00000374606 TOB2Q14106 344 aaPredicted RBP20.56■□□□□ 0.88
PFDN6-201ENST00000374606 TMEM67Q5HYA8 995 aa20.56■□□□□ 0.88
PFDN6-201ENST00000374606 NBPF12Q5TAG4 269 aaPredicted RBP20.56■□□□□ 0.88
PFDN6-201ENST00000374606 DCAF15Q66K64 600 aa20.56■□□□□ 0.88
PFDN6-201ENST00000374606 TATDN1Q6P1N9 297 aa20.56■□□□□ 0.88
PFDN6-201ENST00000374606 ANKRD13AQ8IZ07 590 aa20.56■□□□□ 0.88
PFDN6-201ENST00000374606 BRF1Q92994 677 aa20.56■□□□□ 0.88
PFDN6-201ENST00000374606 CCDC17Q96LX7 622 aa20.56■□□□□ 0.88
PFDN6-201ENST00000374606 ZSCAN10Q96SZ4 725 aaPredicted RBP20.56■□□□□ 0.88
PFDN6-201ENST00000374606 ZKSCAN3Q9BRR0 538 aa20.56■□□□□ 0.88
PFDN6-201ENST00000374606 TMEM106CQ9BVX2 250 aa20.56■□□□□ 0.88
PFDN6-201ENST00000374606 CENPFP49454 3210 aa20.55■□□□□ 0.88
PFDN6-201ENST00000374606 TESPA1A2RU30 521 aaPredicted RBP20.55■□□□□ 0.88
PFDN6-201ENST00000374606 AKR1B1P15121 316 aa20.55■□□□□ 0.88
PFDN6-201ENST00000374606 CERKLQ49MI3 558 aaPredicted RBP20.55■□□□□ 0.88
PFDN6-201ENST00000374606 MIGA2Q7L4E1 593 aa20.55■□□□□ 0.88
PFDN6-201ENST00000374606 FBXL16Q8N461 479 aa20.55■□□□□ 0.88
PFDN6-201ENST00000374606 NEDD1Q8NHV4 660 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms