RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 TYRO3Q06418 890 aa14.54□□□□□ -0.08
PRPF4-202ENST00000374199 STK11IPQ8N1F8 1099 aa14.54□□□□□ -0.08
PRPF4-202ENST00000374199 DAGLBQ8NCG7 672 aa14.54□□□□□ -0.08
PRPF4-202ENST00000374199 SNHG28P0DPA3 235 aa14.54□□□□□ -0.08
PRPF4-202ENST00000374199 ATRNL1Q5VV63 1379 aa14.54□□□□□ -0.08
PRPF4-202ENST00000374199 USP5P45974 858 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 CDK8P49336 464 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 RILPL1Q5EBL4 403 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 C2CD5Q86YS7 1000 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 DYNLL2Q96FJ2 89 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 FAM47AQ5JRC9 791 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 VPS33BQ9H267 617 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 TNMDQ9H2S6 317 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 ZNF287Q9HBT7 754 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 POLR3DP05423 398 aaPredicted RBP14.53□□□□□ -0.08
PRPF4-202ENST00000374199 KCNA3P22001 575 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 GTF2IP78347 998 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 TFAP4Q01664 338 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 SF3A1Q15459 793 aaKnown RBP14.53□□□□□ -0.08
PRPF4-202ENST00000374199 SHC4Q6S5L8 630 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 DIS3L2Q8IYB7 885 aaKnown RBP14.53□□□□□ -0.08
PRPF4-202ENST00000374199 TEX11Q8IYF3 940 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 FAM200AQ8TCP9 573 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 CNKSR1Q969H4 720 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 BPIFA3Q9BQP9 254 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 IDI2Q9BXS1 227 aa14.53□□□□□ -0.08
PRPF4-202ENST00000374199 FBXO2Q9UK22 296 aaPredicted RBP14.53□□□□□ -0.08
PRPF4-202ENST00000374199 C6orf229H3BNL8 230 aa14.52□□□□□ -0.08
PRPF4-202ENST00000374199 KIAA2012Q0VF49 1180 aa14.52□□□□□ -0.08
PRPF4-202ENST00000374199 DDX4Q9NQI0 724 aaKnown RBP14.52□□□□□ -0.08
PRPF4-202ENST00000374199 BTBD18B2RXH4 712 aa14.52□□□□□ -0.09
PRPF4-202ENST00000374199 H0YIN7 160 aa14.52□□□□□ -0.09
PRPF4-202ENST00000374199 CUTAO60888 179 aa14.52□□□□□ -0.09
PRPF4-202ENST00000374199 NDUFA8P51970 172 aa14.52□□□□□ -0.09
PRPF4-202ENST00000374199 LZTS2Q9BRK4 669 aa14.52□□□□□ -0.09
PRPF4-202ENST00000374199 NOL10Q9BSC4 688 aaKnown RBP14.52□□□□□ -0.09
PRPF4-202ENST00000374199 SPZ1Q9BXG8 430 aa14.52□□□□□ -0.09
PRPF4-202ENST00000374199 ZC3H12CQ9C0D7 883 aaKnown RBP14.52□□□□□ -0.09
PRPF4-202ENST00000374199 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.52□□□□□ -0.09
PRPF4-202ENST00000374199 PTPREP23469 700 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 AP5Z1O43299 807 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 PRKCSHP14314 528 aaPredicted RBP14.51□□□□□ -0.09
PRPF4-202ENST00000374199 TRIM29Q14134 588 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 IQCB1Q15051 598 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 MAPKAPK5Q8IW41 473 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 OXER1Q8TDS5 423 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 PSMD1Q99460 953 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 STK32BQ9NY57 414 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 TSPY2A6NKD2 308 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 FOSBP53539 338 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 SLC16A10Q8TF71 515 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 TMEM47Q9BQJ4 181 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 SWAP70Q9UH65 585 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 TUBE1Q9UJT0 475 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 SERPINA10Q9UK55 444 aa14.51□□□□□ -0.09
PRPF4-202ENST00000374199 KIF5BP33176 963 aa14.5□□□□□ -0.09
PRPF4-202ENST00000374199 MDM2Q00987 491 aaPredicted RBP14.5□□□□□ -0.09
PRPF4-202ENST00000374199 EN1Q05925 392 aaPredicted RBP14.5□□□□□ -0.09
PRPF4-202ENST00000374199 CDC42EP5Q6NZY7 148 aa14.5□□□□□ -0.09
PRPF4-202ENST00000374199 FSIP1Q8NA03 581 aa14.5□□□□□ -0.09
PRPF4-202ENST00000374199 PNMA1Q8ND90 353 aa14.5□□□□□ -0.09
PRPF4-202ENST00000374199 BICD2Q8TD16 824 aa14.5□□□□□ -0.09
PRPF4-202ENST00000374199 OSBPL5Q9H0X9 879 aaPredicted RBP14.5□□□□□ -0.09
PRPF4-202ENST00000374199 TOMM22Q9NS69 142 aa14.5□□□□□ -0.09
PRPF4-202ENST00000374199 CYTH3O43739 400 aa14.5□□□□□ -0.09
PRPF4-202ENST00000374199 SCG2P13521 617 aa14.5□□□□□ -0.09
PRPF4-202ENST00000374199 TRAPPC10P48553 1259 aa14.5□□□□□ -0.09
PRPF4-202ENST00000374199 AMOTL1Q8IY63 956 aa14.5□□□□□ -0.09
PRPF4-202ENST00000374199 FBXO41Q8TF61 875 aa14.5□□□□□ -0.09
PRPF4-202ENST00000374199 GOLGA6L4A6NEF3 574 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 PFKFB1P16118 471 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 ME1P48163 572 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 STK38Q15208 465 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 NT5DC1Q5TFE4 455 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 CMTR1Q8N1G2 835 aaKnown RBP14.49□□□□□ -0.09
PRPF4-202ENST00000374199 SLC44A5Q8NCS7 719 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 KCNJ14Q9UNX9 436 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 SRPRBQ9Y5M8 271 aaKnown RBP14.49□□□□□ -0.09
PRPF4-202ENST00000374199 GNAQP50148 359 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 EARS2Q5JPH6 523 aaKnown RBP14.49□□□□□ -0.09
PRPF4-202ENST00000374199 JMYQ8N9B5 988 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 CTCFLQ8NI51 663 aaPredicted RBP14.49□□□□□ -0.09
PRPF4-202ENST00000374199 USP17L3A6NCW0 530 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 USP17L4A6NCW7 530 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 MSL1Q68DK7 614 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 GALNT17Q6IS24 598 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 SARM1Q6SZW1 724 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 USP17L1Q7RTZ2 530 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 NUP133Q8WUM0 1156 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 USP25Q9UHP3 1055 aa14.49□□□□□ -0.09
PRPF4-202ENST00000374199 NOL7Q9UMY1 257 aaKnown RBP14.49□□□□□ -0.09
PRPF4-202ENST00000374199 SHMT1P34896 483 aa14.48□□□□□ -0.09
PRPF4-202ENST00000374199 KRT2P35908 639 aa14.48□□□□□ -0.09
PRPF4-202ENST00000374199 NR5A1Q13285 461 aa14.48□□□□□ -0.09
PRPF4-202ENST00000374199 CCDC73Q6ZRK6 1079 aa14.48□□□□□ -0.09
PRPF4-202ENST00000374199 SPATA20Q8TB22 786 aa14.48□□□□□ -0.09
PRPF4-202ENST00000374199 KAT14Q9H8E8 782 aa14.48□□□□□ -0.09
PRPF4-202ENST00000374199 RRAGDQ9NQL2 400 aaPredicted RBP14.48□□□□□ -0.09
PRPF4-202ENST00000374199 V9GY48 417 aaPredicted RBP14.48□□□□□ -0.09
PRPF4-202ENST00000374199 ECE2O60344 883 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms