RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LPIN2Q92539 896 aa12.77□□□□□ -0.36
VCL-202ENST00000372755 CCNL1Q9UK58 526 aaPredicted RBP12.77□□□□□ -0.36
VCL-202ENST00000372755 TTC36A6NLP5 189 aa12.77□□□□□ -0.36
VCL-202ENST00000372755 ZNF202O95125 648 aa12.77□□□□□ -0.36
VCL-202ENST00000372755 CPA1P15085 419 aa12.77□□□□□ -0.36
VCL-202ENST00000372755 TIMM10P62072 90 aa12.77□□□□□ -0.36
VCL-202ENST00000372755 ZBTB9Q96C00 473 aa12.77□□□□□ -0.36
VCL-202ENST00000372755 IWS1Q96ST2 819 aa12.77□□□□□ -0.36
VCL-202ENST00000372755 CARD6Q9BX69 1037 aa12.77□□□□□ -0.36
VCL-202ENST00000372755 GINS2Q9Y248 185 aa12.77□□□□□ -0.36
VCL-202ENST00000372755 MAEAQ7L5Y9 396 aa12.77□□□□□ -0.37
VCL-202ENST00000372755 FAM114A2Q9NRY5 505 aa12.77□□□□□ -0.37
VCL-202ENST00000372755 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.37
VCL-202ENST00000372755 TEX14Q8IWB6 1497 aa12.77□□□□□ -0.37
VCL-202ENST00000372755 DYMQ7RTS9 669 aa12.77□□□□□ -0.37
VCL-202ENST00000372755 TEKT1Q969V4 418 aa12.77□□□□□ -0.37
VCL-202ENST00000372755 KDM3AQ9Y4C1 1321 aa12.77□□□□□ -0.37
VCL-202ENST00000372755 PPFIA4O75335 1185 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 DPP8Q6V1X1 898 aaPredicted RBP12.76□□□□□ -0.37
VCL-202ENST00000372755 OTUD6AQ7L8S5 288 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 CABS1Q96KC9 395 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 DBNDD2Q9BQY9 259 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 CPSF2Q9P2I0 782 aaKnown RBP12.76□□□□□ -0.37
VCL-202ENST00000372755 MROH5Q6ZUA9 1318 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 VPS37BQ9H9H4 285 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 AATFQ9NY61 560 aaKnown RBP eCLIP12.76□□□□□ -0.37
VCL-202ENST00000372755 PIK3C2GO75747 1445 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 ZYXQ15942 572 aaKnown RBP12.76□□□□□ -0.37
VCL-202ENST00000372755 DENND2CQ68D51 928 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 NLRX1Q86UT6 975 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 RPGRIP1Q96KN7 1286 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 CBX8Q9HC52 389 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 WWC3Q9ULE0 1092 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 ANKRD20A3Q5VUR7 823 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 CCDC51Q96ER9 411 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 PPP1R12CQ9BZL4 782 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 RLBP1P12271 317 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 KRT40Q6A162 431 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 TRPC6Q9Y210 931 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 NFE2L3Q9Y4A8 694 aa12.76□□□□□ -0.37
VCL-202ENST00000372755 KRT24Q2M2I5 525 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 MCTP2Q6DN12 878 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 ZNF790Q6PG37 636 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 NCOA5Q9HCD5 579 aaKnown RBP12.75□□□□□ -0.37
VCL-202ENST00000372755 ZBTB24O43167 697 aaPredicted RBP12.75□□□□□ -0.37
VCL-202ENST00000372755 RASSF2P50749 326 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 MAP3K21Q5TCX8 1036 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 KBTBD3Q8NAB2 608 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
VCL-202ENST00000372755 ZBTB7BO15156 539 aaPredicted RBP12.75□□□□□ -0.37
VCL-202ENST00000372755 PRDM1O75626 825 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 TBC1D8O95759 1140 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 PPP2R5CQ13362 524 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 NELFCDQ8IXH7 590 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 TBC1D7Q9P0N9 293 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 AMFRQ9UKV5 643 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 TNNQ9UQP3 1299 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 RNF40O75150 1001 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 NSMFQ6X4W1 530 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 GBP7Q8N8V2 638 aaPredicted RBP12.75□□□□□ -0.37
VCL-202ENST00000372755 SPATA5Q8NB90 893 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 NCAPGQ9BPX3 1015 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 MYO1AQ9UBC5 1043 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 CD2APQ9Y5K6 639 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 KDM2BQ8NHM5 1336 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 CLGNO14967 610 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 RFX1P22670 979 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 GRK7Q8WTQ7 553 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 TBC1D22AQ8WUA7 517 aa12.75□□□□□ -0.37
VCL-202ENST00000372755 H0YIN7 160 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 TROVE2P10155 538 aaKnown RBP eCLIP12.74□□□□□ -0.37
VCL-202ENST00000372755 CTDSPL2Q05D32 466 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 LONRF2Q1L5Z9 754 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 USH1GQ495M9 461 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 MAN1A1P33908 653 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 LARGE2Q8N3Y3 721 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 TNNI1P19237 187 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 PHBP35232 272 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 CCDC38Q502W7 563 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 RSAD2Q8WXG1 361 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 A2MP01023 1474 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 CFBP00751 764 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 ZNF853P0CG23 659 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 CLNS1AP54105 237 aaKnown RBP12.74□□□□□ -0.37
VCL-202ENST00000372755 IRX4P78413 519 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 REXO1Q8N1G1 1221 aaKnown RBP12.74□□□□□ -0.37
VCL-202ENST00000372755 IFIH1Q9BYX4 1025 aaKnown RBP12.74□□□□□ -0.37
VCL-202ENST00000372755 VCX3AQ9NNX9 186 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 PRAG1Q86YV5 1406 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 WDR46O15213 610 aaKnown RBP12.74□□□□□ -0.37
VCL-202ENST00000372755 DEPTORQ8TB45 409 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 RAB20Q9NX57 234 aa12.74□□□□□ -0.37
VCL-202ENST00000372755 SGSM2O43147 1006 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 RFC1P35251 1148 aaPredicted RBP12.73□□□□□ -0.37
VCL-202ENST00000372755 PPP2R5EQ16537 467 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 CPXCR1Q8N123 301 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 PPP4R1Q8TF05 950 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 SND1Q7KZF4 910 aaKnown RBP eCLIP12.73□□□□□ -0.373e-6■■□□□ 14.2
VCL-202ENST00000372755 RNF10Q8N5U6 811 aaKnown RBP12.73□□□□□ -0.37
VCL-202ENST00000372755 PHACTR3Q96KR7 559 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms