RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
LCN1-202ENST00000371781 POTEJP0CG39 1038 aa12.75□□□□□ -0.37
LCN1-202ENST00000371781 FDPSP14324 419 aaKnown RBP12.75□□□□□ -0.37
LCN1-202ENST00000371781 TROAPQ12815 778 aa12.75□□□□□ -0.37
LCN1-202ENST00000371781 ANGEL2Q5VTE6 544 aaKnown RBP12.75□□□□□ -0.37
LCN1-202ENST00000371781 DLK2Q6UY11 383 aa12.75□□□□□ -0.37
LCN1-202ENST00000371781 CCDC144CPQ8IYA2 1237 aa12.75□□□□□ -0.37
LCN1-202ENST00000371781 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.75□□□□□ -0.37
LCN1-202ENST00000371781 PI4KBQ9UBF8 816 aa12.75□□□□□ -0.37
LCN1-202ENST00000371781 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
LCN1-202ENST00000371781 DOCK1Q14185 1865 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 GOLGA8AA7E2F4 631 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 H7C1D1 291 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 ZBTB43O43298 467 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 GDF11O95390 407 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 TSPY3P0CV98 308 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 TSPY8P0CW00 308 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 GJB2P29033 226 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 ADD1P35611 737 aaKnown RBP12.74□□□□□ -0.37
LCN1-202ENST00000371781 NT5C2P49902 561 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 MAP3K10Q02779 954 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 FUT2Q10981 343 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 DPY19L2Q6NUT2 758 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 SIAH1Q8IUQ4 282 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
LCN1-202ENST00000371781 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
LCN1-202ENST00000371781 NAP1L2Q9ULW6 460 aaPredicted RBP12.74□□□□□ -0.37
LCN1-202ENST00000371781 CCDC69A6NI79 296 aa12.73□□□□□ -0.37
LCN1-202ENST00000371781 PLEKHA8P1O95397 391 aa12.73□□□□□ -0.37
LCN1-202ENST00000371781 METAP2P50579 478 aaKnown RBP eCLIP12.73□□□□□ -0.37
LCN1-202ENST00000371781 RAB3GAP1Q15042 981 aa12.73□□□□□ -0.37
LCN1-202ENST00000371781 IFIT1BQ5T764 474 aaKnown RBP12.73□□□□□ -0.37
LCN1-202ENST00000371781 NFXL1Q6ZNB6 911 aa12.73□□□□□ -0.37
LCN1-202ENST00000371781 IQCA1Q86XH1 822 aa12.73□□□□□ -0.37
LCN1-202ENST00000371781 DGKHQ86XP1 1220 aa12.73□□□□□ -0.37
LCN1-202ENST00000371781 FOXP4Q8IVH2 680 aaPredicted RBP12.73□□□□□ -0.37
LCN1-202ENST00000371781 ZNF444Q8N0Y2 327 aaPredicted RBP12.73□□□□□ -0.37
LCN1-202ENST00000371781 SHISA4Q96DD7 197 aa12.73□□□□□ -0.37
LCN1-202ENST00000371781 CHAMP1Q96JM3 812 aa12.73□□□□□ -0.37
LCN1-202ENST00000371781 ADARB2Q9NS39 739 aaKnown RBP12.73□□□□□ -0.37
LCN1-202ENST00000371781 CHMP5Q9NZZ3 219 aa12.73□□□□□ -0.37
LCN1-202ENST00000371781 CIZ1Q9ULV3 898 aaPredicted RBP12.73□□□□□ -0.37
LCN1-202ENST00000371781 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 CNTNAP5Q8WYK1 1306 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 PHF20L1A8MW92 1017 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 MYO1BO43795 1136 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 DDAH1O94760 285 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 BRD1O95696 1058 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 HSP90AA1P07900 732 aaKnown RBP12.72□□□□□ -0.37
LCN1-202ENST00000371781 RCAN1P53805 252 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 SART3Q15020 963 aaKnown RBP12.72□□□□□ -0.37
LCN1-202ENST00000371781 NBPF12Q5TAG4 269 aaPredicted RBP12.72□□□□□ -0.37
LCN1-202ENST00000371781 PRAMEF18Q5VWM3 479 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 NBPF11Q86T75 865 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 LRRC47Q8N1G4 583 aaKnown RBP12.72□□□□□ -0.37
LCN1-202ENST00000371781 CRACR2BQ8N4Y2 399 aaPredicted RBP12.72□□□□□ -0.37
LCN1-202ENST00000371781 DDX11Q96FC9 970 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 AIFM3Q96NN9 605 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 LLPHQ9BRT6 129 aaKnown RBP12.72□□□□□ -0.37
LCN1-202ENST00000371781 DEFB129Q9H1M3 183 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 MTMR4Q9NYA4 1195 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
LCN1-202ENST00000371781 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 SLC12A7Q9Y666 1083 aa12.72□□□□□ -0.37
LCN1-202ENST00000371781 MYH6P13533 1939 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 ERICH2A1L162 156 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 ADM5C9JUS6 153 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 TBC1D12O60347 775 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 GRM4Q14833 912 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 SEPT2Q15019 361 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 RTN1Q16799 776 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 TMTC3Q6ZXV5 915 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 MIGA2Q7L4E1 593 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 CCDC84Q86UT8 332 aaPredicted RBP12.71□□□□□ -0.37
LCN1-202ENST00000371781 APOBEC3FQ8IUX4 373 aaKnown RBP12.71□□□□□ -0.37
LCN1-202ENST00000371781 CMTR1Q8N1G2 835 aaKnown RBP12.71□□□□□ -0.37
LCN1-202ENST00000371781 PNMA1Q8ND90 353 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 PHKBQ93100 1093 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 ZNF287Q9HBT7 754 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 CWC22Q9HCG8 908 aaKnown RBP12.71□□□□□ -0.37
LCN1-202ENST00000371781 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 TAOK2Q9UL54 1235 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 FZD1Q9UP38 647 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 MTMR6Q9Y217 621 aa12.71□□□□□ -0.37
LCN1-202ENST00000371781 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.71□□□□□ -0.37
LCN1-202ENST00000371781 MYH15Q9Y2K3 1946 aa12.7□□□□□ -0.38
LCN1-202ENST00000371781 PITPNM2Q9BZ72 1349 aa12.7□□□□□ -0.38
LCN1-202ENST00000371781 GH2P01242 217 aa12.7□□□□□ -0.38
LCN1-202ENST00000371781 SYT1P21579 422 aa12.7□□□□□ -0.38
LCN1-202ENST00000371781 CERKLQ49MI3 558 aaPredicted RBP12.7□□□□□ -0.38
LCN1-202ENST00000371781 STAG2Q8N3U4 1231 aa12.7□□□□□ -0.38
LCN1-202ENST00000371781 CHMP4CQ96CF2 233 aa12.7□□□□□ -0.38
LCN1-202ENST00000371781 CCDC17Q96LX7 622 aa12.7□□□□□ -0.38
LCN1-202ENST00000371781 TAF1DQ9H5J8 278 aaPredicted RBP12.7□□□□□ -0.38
LCN1-202ENST00000371781 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.7□□□□□ -0.38
LCN1-202ENST00000371781 GJB4Q9NTQ9 266 aa12.7□□□□□ -0.38
LCN1-202ENST00000371781 ZBTB21Q9ULJ3 1066 aa12.7□□□□□ -0.38
LCN1-202ENST00000371781 STX8Q9UNK0 236 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms