RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 MAP3K14Q99558 947 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 FAM198AQ9UFP1 575 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 GREB1LQ9C091 1923 aaPredicted RBP20.34■□□□□ 0.85
SSBP3-203ENST00000371319 NPM3O75607 178 aaKnown RBP20.34■□□□□ 0.85
SSBP3-203ENST00000371319 NOVP48745 357 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 CACNB3P54284 484 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 CFAP100Q494V2 611 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 PNMA1Q8ND90 353 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 CTCFLQ8NI51 663 aaPredicted RBP20.34■□□□□ 0.85
SSBP3-203ENST00000371319 USP28Q96RU2 1077 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 TMEM47Q9BQJ4 181 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.34■□□□□ 0.85
SSBP3-203ENST00000371319 FTOQ9C0B1 505 aaKnown RBP eCLIP20.34■□□□□ 0.85
SSBP3-203ENST00000371319 RCOR1Q9UKL0 485 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 CNTNAP5Q8WYK1 1306 aa20.33■□□□□ 0.85
SSBP3-203ENST00000371319 PSDA5PKW4 1024 aaPredicted RBP20.33■□□□□ 0.84
SSBP3-203ENST00000371319 TRIM29Q14134 588 aa20.33■□□□□ 0.84
SSBP3-203ENST00000371319 GRM4Q14833 912 aa20.33■□□□□ 0.84
SSBP3-203ENST00000371319 PKN1Q16512 942 aa20.33■□□□□ 0.84
SSBP3-203ENST00000371319 GAS2L3Q86XJ1 694 aa20.33■□□□□ 0.84
SSBP3-203ENST00000371319 NIM1KQ8IY84 436 aa20.33■□□□□ 0.84
SSBP3-203ENST00000371319 SRBD1Q8N5C6 995 aaKnown RBP20.33■□□□□ 0.84
SSBP3-203ENST00000371319 SWAP70Q9UH65 585 aa20.33■□□□□ 0.84
SSBP3-203ENST00000371319 ZNRF3Q9ULT6 936 aa20.33■□□□□ 0.84
SSBP3-203ENST00000371319 HLA-DOAP06340 250 aa20.32■□□□□ 0.84
SSBP3-203ENST00000371319 MYSM1Q5VVJ2 828 aa20.32■□□□□ 0.84
SSBP3-203ENST00000371319 PGBD1Q96JS3 809 aa20.32■□□□□ 0.84
SSBP3-203ENST00000371319 EHD4Q9H223 541 aa20.32■□□□□ 0.84
SSBP3-203ENST00000371319 PPP1R1BQ9UD71 204 aaPredicted RBP20.32■□□□□ 0.84
SSBP3-203ENST00000371319 SERPINB13Q9UIV8 391 aa20.32■□□□□ 0.84
SSBP3-203ENST00000371319 IGKV6D-41A0A0C4DH26 115 aa20.31■□□□□ 0.84
SSBP3-203ENST00000371319 GOLGA6L3A6NEY3 463 aa20.31■□□□□ 0.84
SSBP3-203ENST00000371319 SHMT1P34896 483 aa20.31■□□□□ 0.84
SSBP3-203ENST00000371319 TPRNQ4KMQ1 711 aa20.31■□□□□ 0.84
SSBP3-203ENST00000371319 SH3BP5LQ7L8J4 393 aa20.31■□□□□ 0.84
SSBP3-203ENST00000371319 SHISA4Q96DD7 197 aa20.31■□□□□ 0.84
SSBP3-203ENST00000371319 RTEL1Q9NZ71 1219 aa20.31■□□□□ 0.84
SSBP3-203ENST00000371319 NFKBIEO00221 500 aa20.3■□□□□ 0.84
SSBP3-203ENST00000371319 MMP1P03956 469 aa20.3■□□□□ 0.84
SSBP3-203ENST00000371319 AKR1B1P15121 316 aa20.3■□□□□ 0.84
SSBP3-203ENST00000371319 U2AF2P26368 475 aaKnown RBP eCLIP20.3■□□□□ 0.84
SSBP3-203ENST00000371319 CEBPZQ03701 1054 aaKnown RBP20.3■□□□□ 0.84
SSBP3-203ENST00000371319 SYAP1Q96A49 352 aaPredicted RBP20.3■□□□□ 0.84
SSBP3-203ENST00000371319 CEP95Q96GE4 821 aa20.3■□□□□ 0.84
SSBP3-203ENST00000371319 PRMT6Q96LA8 375 aaPredicted RBP20.3■□□□□ 0.84
SSBP3-203ENST00000371319 TAOK3Q9H2K8 898 aa20.3■□□□□ 0.84
SSBP3-203ENST00000371319 TDRD3Q9H7E2 651 aaKnown RBP20.3■□□□□ 0.84
SSBP3-203ENST00000371319 V9GY48 417 aaPredicted RBP20.3■□□□□ 0.84
SSBP3-203ENST00000371319 DDTLA6NHG4 134 aaPredicted RBP20.29■□□□□ 0.84
SSBP3-203ENST00000371319 KIF5BP33176 963 aa20.29■□□□□ 0.84
SSBP3-203ENST00000371319 AKAP17AQ02040 695 aaKnown RBP20.29■□□□□ 0.84
SSBP3-203ENST00000371319 TCP10Q12799 353 aa20.29■□□□□ 0.84
SSBP3-203ENST00000371319 DHX36Q9H2U1 1008 aaKnown RBP20.29■□□□□ 0.84
SSBP3-203ENST00000371319 MAD2L2Q9UI95 211 aa20.29■□□□□ 0.84
SSBP3-203ENST00000371319 TAOK2Q9UL54 1235 aa20.29■□□□□ 0.84
SSBP3-203ENST00000371319 ISY1Q9ULR0 285 aaKnown RBP20.29■□□□□ 0.84
SSBP3-203ENST00000371319 STX8Q9UNK0 236 aa20.29■□□□□ 0.84
SSBP3-203ENST00000371319 KCNJ14Q9UNX9 436 aa20.29■□□□□ 0.84
SSBP3-203ENST00000371319 COL2A1P02458 1487 aaPredicted RBP20.29■□□□□ 0.84
SSBP3-203ENST00000371319 KLHL34Q8N239 644 aa20.29■□□□□ 0.84
SSBP3-203ENST00000371319 DNAJC18Q9H819 358 aa20.29■□□□□ 0.84
SSBP3-203ENST00000371319 ZBTB12Q9Y330 459 aaPredicted RBP20.29■□□□□ 0.84
SSBP3-203ENST00000371319 CLIC4Q9Y696 253 aa20.29■□□□□ 0.84
SSBP3-203ENST00000371319 ARFGEF1Q9Y6D6 1849 aa20.29■□□□□ 0.84
SSBP3-203ENST00000371319 hCG_1642624A0A1W2PR95 340 aa20.28■□□□□ 0.84
SSBP3-203ENST00000371319 ENTPD3O75355 529 aa20.28■□□□□ 0.84
SSBP3-203ENST00000371319 SLURP2P0DP57 97 aa20.28■□□□□ 0.84
SSBP3-203ENST00000371319 TOP1P11387 765 aaKnown RBP20.28■□□□□ 0.84
SSBP3-203ENST00000371319 CXCL9Q07325 125 aa20.28■□□□□ 0.84
SSBP3-203ENST00000371319 CCDC183Q5T5S1 534 aa20.28■□□□□ 0.84
SSBP3-203ENST00000371319 STAG2Q8N3U4 1231 aa20.28■□□□□ 0.84
SSBP3-203ENST00000371319 PALM3A6NDB9 673 aaPredicted RBP20.27■□□□□ 0.84
SSBP3-203ENST00000371319 SPDYE2BA6NHP3 402 aa20.27■□□□□ 0.84
SSBP3-203ENST00000371319 SPDYE6P0CI01 402 aa20.27■□□□□ 0.84
SSBP3-203ENST00000371319 LIG1P18858 919 aa20.27■□□□□ 0.84
SSBP3-203ENST00000371319 NASPP49321 788 aaPredicted RBP20.27■□□□□ 0.84
SSBP3-203ENST00000371319 AGBL3Q8NEM8 1001 aa20.27■□□□□ 0.84
SSBP3-203ENST00000371319 POLR3EQ9NVU0 708 aa20.27■□□□□ 0.84
SSBP3-203ENST00000371319 MTMR4Q9NYA4 1195 aa20.27■□□□□ 0.84
SSBP3-203ENST00000371319 HDAC9Q9UKV0 1011 aa20.27■□□□□ 0.84
SSBP3-203ENST00000371319 ATRNL1Q5VV63 1379 aa20.27■□□□□ 0.84
SSBP3-203ENST00000371319 SYCE3A1L190 88 aa20.26■□□□□ 0.83
SSBP3-203ENST00000371319 BTBD18B2RXH4 712 aa20.26■□□□□ 0.83
SSBP3-203ENST00000371319 GNAQP50148 359 aa20.26■□□□□ 0.83
SSBP3-203ENST00000371319 SLC35G1Q2M3R5 365 aa20.26■□□□□ 0.83
SSBP3-203ENST00000371319 L1TD1Q5T7N2 865 aaKnown RBP20.26■□□□□ 0.83
SSBP3-203ENST00000371319 DIS3L2Q8IYB7 885 aaKnown RBP20.26■□□□□ 0.83
SSBP3-203ENST00000371319 LINC00301Q8NCQ3 95 aa20.26■□□□□ 0.83
SSBP3-203ENST00000371319 PHF20Q9BVI0 1012 aa20.26■□□□□ 0.83
SSBP3-203ENST00000371319 FOXP1Q9H334 677 aaPredicted RBP20.26■□□□□ 0.83
SSBP3-203ENST00000371319 VPS54Q9P1Q0 977 aa20.26■□□□□ 0.83
SSBP3-203ENST00000371319 PI4KBQ9UBF8 816 aa20.26■□□□□ 0.83
SSBP3-203ENST00000371319 BCS1LQ9Y276 419 aa20.26■□□□□ 0.83
SSBP3-203ENST00000371319 YEATS4O95619 227 aa20.25■□□□□ 0.83
SSBP3-203ENST00000371319 GNL2Q13823 731 aaKnown RBP20.25■□□□□ 0.83
SSBP3-203ENST00000371319 SAFBQ15424 915 aaKnown RBP eCLIP20.25■□□□□ 0.83
SSBP3-203ENST00000371319 LTBP3Q9NS15 1303 aa20.25■□□□□ 0.83
SSBP3-203ENST00000371319 GOLGA6L4A6NEF3 574 aa20.25■□□□□ 0.83
SSBP3-203ENST00000371319 DLGAP5Q15398 846 aa20.25■□□□□ 0.83
SSBP3-203ENST00000371319 PFKFB3Q16875 520 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms