RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 PNMA3Q9UL41 463 aa13.27□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L12C9JPN9 530 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L21D6R901 530 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 ADCY3O60266 1144 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 CCL5P13501 91 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 AKR1B1P15121 316 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 GCLCP48506 637 aaPredicted RBP13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 TRIM32Q13049 653 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 RLFQ13129 1914 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 IRF5Q13568 498 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 C12orf60Q5U649 245 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L2Q6R6M4 530 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 STRBPQ96SI9 672 aaKnown RBP13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 SALL3Q9BXA9 1300 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 UNC93B1Q9H1C4 597 aa13.26□□□□□ -0.29
EXOSC1-202ENST00000370885 VCAM1P19320 739 aa13.25□□□□□ -0.29
EXOSC1-202ENST00000370885 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
EXOSC1-202ENST00000370885 IRX3P78415 501 aaPredicted RBP13.25□□□□□ -0.29
EXOSC1-202ENST00000370885 PABPC4Q13310 644 aaKnown RBP eCLIP13.25□□□□□ -0.299e-7■■□□□ 13.7
EXOSC1-202ENST00000370885 CTR9Q6PD62 1173 aa13.25□□□□□ -0.29
EXOSC1-202ENST00000370885 KBTBD3Q8NAB2 608 aa13.25□□□□□ -0.29
EXOSC1-202ENST00000370885 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.25□□□□□ -0.29
EXOSC1-202ENST00000370885 KIAA1683Q9H0B3 1180 aa13.25□□□□□ -0.29
EXOSC1-202ENST00000370885 PORCNQ9H237 461 aa13.25□□□□□ -0.29
EXOSC1-202ENST00000370885 ATP8A2Q9NTI2 1148 aa13.25□□□□□ -0.29
EXOSC1-202ENST00000370885 SLC4A4Q9Y6R1 1079 aa13.25□□□□□ -0.29
EXOSC1-202ENST00000370885 MYH8P13535 1937 aa13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 GSG1L2A8MUP6 293 aa13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 M0R2C6 588 aa13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 INHAP05111 366 aa13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 CDK8P49336 464 aa13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 PRPF38BQ5VTL8 546 aaKnown RBP13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 CATSPERGQ6ZRH7 1159 aa13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 UBE2Q1Q7Z7E8 422 aa13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 SLAIN1Q8ND83 568 aa13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 SEC62Q99442 399 aaKnown RBP13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 EPB41L4AQ9HCS5 686 aaPredicted RBP13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 PPP4R2Q9NY27 417 aa13.24□□□□□ -0.29
EXOSC1-202ENST00000370885 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 RNF113AO15541 343 aaKnown RBP13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 GJB1P08034 283 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 GJA8P48165 433 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 ERVK-9P63128 1117 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 ERVK-24P63145 666 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 C16orf86Q6ZW13 317 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 GPRC5AQ8NFJ5 357 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 PXYLP1Q8TE99 480 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 COA7Q96BR5 231 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 FEZ1Q99689 392 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 RNF208Q9H0X6 261 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 CABP5Q9NP86 173 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 BTBD7Q9P203 1132 aa13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 BIN2Q9UBW5 565 aaPredicted RBP13.23□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L15C9J2P7 530 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L13C9JLJ4 530 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L11C9JVI0 530 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L18D6R9N7 530 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L22D6RA61 530 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L17D6RBQ6 530 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L19D6RCP7 530 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L20D6RJB6 530 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 USP17L24Q0WX57 530 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 STK11IPQ8N1F8 1099 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 USP6NLQ92738 828 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 PAGR1Q9BTK6 254 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 RPAP3Q9H6T3 665 aaPredicted RBP13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 TAOK2Q9UL54 1235 aa13.22□□□□□ -0.29
EXOSC1-202ENST00000370885 CEP290O15078 2479 aa13.21□□□□□ -0.29
EXOSC1-202ENST00000370885 GREB1LQ9C091 1923 aaPredicted RBP13.21□□□□□ -0.29
EXOSC1-202ENST00000370885 TTC41PQ6P2S7 1318 aa13.21□□□□□ -0.29
EXOSC1-202ENST00000370885 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
EXOSC1-202ENST00000370885 FOXP2O15409 715 aa13.21□□□□□ -0.29
EXOSC1-202ENST00000370885 ZSCAN25Q6NSZ9 544 aa13.21□□□□□ -0.29
EXOSC1-202ENST00000370885 TMEM179Q6ZVK1 233 aa13.21□□□□□ -0.29
EXOSC1-202ENST00000370885 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.29
EXOSC1-202ENST00000370885 TRIB2Q92519 343 aa13.21□□□□□ -0.29
EXOSC1-202ENST00000370885 APPBP2Q92624 585 aa13.21□□□□□ -0.29
EXOSC1-202ENST00000370885 SWAP70Q9UH65 585 aa13.21□□□□□ -0.29
EXOSC1-202ENST00000370885 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 PARP14Q460N5 1801 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 GPAA1O43292 621 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 MX1P20591 662 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 CYP2B6P20813 491 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 USP14P54578 494 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 UBXN2AP68543 259 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 HDAC1Q13547 482 aaPredicted RBP13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 CCL14Q16627 93 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 SBK1Q52WX2 424 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 MORN1Q5T089 497 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 ANKRD45Q5TZF3 282 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 GPR142Q7Z601 462 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 PAK6Q9NQU5 681 aaPredicted RBP13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 RABGAP1Q9Y3P9 1069 aa13.2□□□□□ -0.3
EXOSC1-202ENST00000370885 A0A0G2JMZ2 1700 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 SGPL1O95470 568 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 IGHDP01880 384 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 RASA1P20936 1047 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 MNX1P50219 401 aaPredicted RBP13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 LBX2Q6XYB7 198 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms