RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 SLC44A5Q8NCS7 719 aa15.99■□□□□ 0.15
RPF1-201ENST00000370654 USP6NLQ92738 828 aa15.99■□□□□ 0.15
RPF1-201ENST00000370654 PAWRQ96IZ0 340 aaKnown RBP15.99■□□□□ 0.15
RPF1-201ENST00000370654 NAV1Q8NEY1 1877 aa15.98■□□□□ 0.15
RPF1-201ENST00000370654 SEPT2Q15019 361 aa15.98■□□□□ 0.15
RPF1-201ENST00000370654 ABCB5Q2M3G0 1257 aa15.98■□□□□ 0.15
RPF1-201ENST00000370654 TTC6Q86TZ1 520 aa15.98■□□□□ 0.15
RPF1-201ENST00000370654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.98■□□□□ 0.15
RPF1-201ENST00000370654 C12orf42Q96LP6 360 aa15.98■□□□□ 0.15
RPF1-201ENST00000370654 PRO3102Q9H379 93 aa15.98■□□□□ 0.15
RPF1-201ENST00000370654 BOLA2Q9H3K6 86 aa15.98■□□□□ 0.15
RPF1-201ENST00000370654 ARMT1Q9H993 441 aa15.98■□□□□ 0.15
RPF1-201ENST00000370654 DDX19BQ9UMR2 479 aa15.98■□□□□ 0.15
RPF1-201ENST00000370654 TRIOBPQ9H2D6 2365 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 A0A1W2PRG0 241 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 SMARCA5O60264 1052 aaPredicted RBP15.97■□□□□ 0.15
RPF1-201ENST00000370654 POLR3DP05423 398 aaPredicted RBP15.97■□□□□ 0.15
RPF1-201ENST00000370654 IFIT2P09913 472 aaKnown RBP15.97■□□□□ 0.15
RPF1-201ENST00000370654 VCAM1P19320 739 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 KIAA1755Q5JYT7 1200 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 MORN1Q5T089 497 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 MAP3K21Q5TCX8 1036 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 GPR142Q7Z601 462 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 DYNLL2Q96FJ2 89 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 FEZ1Q99689 392 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 HTATIP2Q9BUP3 242 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 DCP1AQ9NPI6 582 aaPredicted RBP15.97■□□□□ 0.15
RPF1-201ENST00000370654 MCM9Q9NXL9 1143 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 BTBD7Q9P203 1132 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 RCAN3Q9UKA8 241 aa15.97■□□□□ 0.15
RPF1-201ENST00000370654 TTF1Q15361 905 aaPredicted RBP15.96■□□□□ 0.15
RPF1-201ENST00000370654 CATSPERGQ6ZRH7 1159 aa15.96■□□□□ 0.15
RPF1-201ENST00000370654 CERS3Q8IU89 383 aa15.96■□□□□ 0.15
RPF1-201ENST00000370654 CLEC10AQ8IUN9 316 aa15.96■□□□□ 0.15
RPF1-201ENST00000370654 NUDT12Q9BQG2 462 aa15.96■□□□□ 0.15
RPF1-201ENST00000370654 KIAA1683Q9H0B3 1180 aa15.96■□□□□ 0.15
RPF1-201ENST00000370654 RPTORQ8N122 1335 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 CYP2D7A0A087X1C5 515 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 USP17L15C9J2P7 530 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 USP17L13C9JLJ4 530 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 USP17L11C9JVI0 530 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 USP17L18D6R9N7 530 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 USP17L22D6RA61 530 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 USP17L17D6RBQ6 530 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 USP17L19D6RCP7 530 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 USP17L20D6RJB6 530 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 MS4A1P11836 297 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 PRKAR2AP13861 404 aaKnown RBP15.95■□□□□ 0.14
RPF1-201ENST00000370654 USP17L24Q0WX57 530 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 SIAH1Q8IUQ4 282 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 CRNKL1Q9BZJ0 848 aaKnown RBP15.95■□□□□ 0.14
RPF1-201ENST00000370654 HMX1Q9NP08 348 aaPredicted RBP15.95■□□□□ 0.14
RPF1-201ENST00000370654 PAG1Q9NWQ8 432 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 FLRT1Q9NZU1 646 aa15.95■□□□□ 0.14
RPF1-201ENST00000370654 RANBP2P49792 3224 aaKnown RBP15.94■□□□□ 0.14
RPF1-201ENST00000370654 RAB11FIP3O75154 756 aa15.94■□□□□ 0.14
RPF1-201ENST00000370654 HMMRO75330 724 aa15.94■□□□□ 0.14
RPF1-201ENST00000370654 MBD4O95243 580 aa15.94■□□□□ 0.14
RPF1-201ENST00000370654 ATP5JP18859 108 aa15.94■□□□□ 0.14
RPF1-201ENST00000370654 CCND3P30281 292 aaPredicted RBP15.94■□□□□ 0.14
RPF1-201ENST00000370654 MAPK4P31152 587 aa15.94■□□□□ 0.14
RPF1-201ENST00000370654 ADD2P35612 726 aa15.94■□□□□ 0.14
RPF1-201ENST00000370654 CACNB2Q08289 660 aaPredicted RBP15.94■□□□□ 0.14
RPF1-201ENST00000370654 PLEKHH3Q7Z736 793 aa15.94■□□□□ 0.14
RPF1-201ENST00000370654 RPAP3Q9H6T3 665 aaPredicted RBP15.94■□□□□ 0.14
RPF1-201ENST00000370654 SZT2Q5T011 3432 aa15.93■□□□□ 0.14
RPF1-201ENST00000370654 SPDYE16A6NNV3 312 aaPredicted RBP15.93■□□□□ 0.14
RPF1-201ENST00000370654 EVI5O60447 810 aa15.93■□□□□ 0.14
RPF1-201ENST00000370654 XRCC5P13010 732 aaKnown RBP15.93■□□□□ 0.14
RPF1-201ENST00000370654 TMED8Q6PL24 325 aaPredicted RBP15.93■□□□□ 0.14
RPF1-201ENST00000370654 HAUS7Q99871 368 aa15.93■□□□□ 0.14
RPF1-201ENST00000370654 CABP5Q9NP86 173 aa15.93■□□□□ 0.14
RPF1-201ENST00000370654 OGDHLQ9ULD0 1010 aa15.93■□□□□ 0.14
RPF1-201ENST00000370654 RABGAP1Q9Y3P9 1069 aa15.93■□□□□ 0.14
RPF1-201ENST00000370654 BAZ2AQ9UIF9 1905 aaKnown RBP15.93■□□□□ 0.14
RPF1-201ENST00000370654 MPHOSPH10O00566 681 aaKnown RBP15.92■□□□□ 0.14
RPF1-201ENST00000370654 AKR1B1P15121 316 aa15.92■□□□□ 0.14
RPF1-201ENST00000370654 SOCS4Q8WXH5 440 aa15.92■□□□□ 0.14
RPF1-201ENST00000370654 STAP2Q9UGK3 403 aa15.92■□□□□ 0.14
RPF1-201ENST00000370654 RLFQ13129 1914 aa15.91■□□□□ 0.14
RPF1-201ENST00000370654 ZKSCAN1P17029 563 aaPredicted RBP15.91■□□□□ 0.14
RPF1-201ENST00000370654 RGS2P41220 211 aa15.91■□□□□ 0.14
RPF1-201ENST00000370654 USP14P54578 494 aa15.91■□□□□ 0.14
RPF1-201ENST00000370654 PDE3AQ14432 1141 aa15.91■□□□□ 0.14
RPF1-201ENST00000370654 LHX8Q68G74 356 aa15.91■□□□□ 0.14
RPF1-201ENST00000370654 NECAB2Q7Z6G3 386 aa15.91■□□□□ 0.14
RPF1-201ENST00000370654 NPLOC4Q8TAT6 608 aa15.91■□□□□ 0.14
RPF1-201ENST00000370654 NR2E3Q9Y5X4 410 aa15.91■□□□□ 0.14
RPF1-201ENST00000370654 PFASO15067 1338 aa15.91■□□□□ 0.14
RPF1-201ENST00000370654 MAP2K5Q13163 448 aa15.9■□□□□ 0.14
RPF1-201ENST00000370654 WDR78Q5VTH9 848 aa15.9■□□□□ 0.14
RPF1-201ENST00000370654 TSHZ3Q63HK5 1081 aa15.9■□□□□ 0.14
RPF1-201ENST00000370654 LBX2Q6XYB7 198 aa15.9■□□□□ 0.14
RPF1-201ENST00000370654 C7orf61Q8IZ16 206 aa15.9■□□□□ 0.14
RPF1-201ENST00000370654 GTF3C2Q8WUA4 911 aaPredicted RBP15.9■□□□□ 0.14
RPF1-201ENST00000370654 APBA2Q99767 749 aa15.9■□□□□ 0.14
RPF1-201ENST00000370654 PUS7LQ9H0K6 701 aaKnown RBP15.9■□□□□ 0.14
RPF1-201ENST00000370654 ZMYND8Q9ULU4 1186 aaPredicted RBP15.9■□□□□ 0.14
RPF1-201ENST00000370654 USP17L12C9JPN9 530 aa15.89■□□□□ 0.13
RPF1-201ENST00000370654 USP17L21D6R901 530 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms