RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 MYH1P12882 1939 aa17.89■□□□□ 0.45
LMO4-201ENST00000370542 FSD2A1L4K1 749 aa17.88■□□□□ 0.45
LMO4-201ENST00000370542 RRP9O43818 475 aaKnown RBP17.88■□□□□ 0.45
LMO4-201ENST00000370542 ADCY3O60266 1144 aa17.88■□□□□ 0.45
LMO4-201ENST00000370542 HLA-DOAP06340 250 aa17.88■□□□□ 0.45
LMO4-201ENST00000370542 MRE11P49959 708 aa17.88■□□□□ 0.45
LMO4-201ENST00000370542 TTF1Q15361 905 aaPredicted RBP17.88■□□□□ 0.45
LMO4-201ENST00000370542 MIGA1Q8NAN2 632 aa17.88■□□□□ 0.45
LMO4-201ENST00000370542 TBC1D32Q96NH3 1257 aa17.88■□□□□ 0.45
LMO4-201ENST00000370542 IL1RAPL2Q9NP60 686 aa17.88■□□□□ 0.45
LMO4-201ENST00000370542 GJD2Q9UKL4 321 aa17.88■□□□□ 0.45
LMO4-201ENST00000370542 USP17L10C9JJH3 530 aa17.87■□□□□ 0.45
LMO4-201ENST00000370542 RAB11FIP3O75154 756 aa17.87■□□□□ 0.45
LMO4-201ENST00000370542 HMMRO75330 724 aa17.87■□□□□ 0.45
LMO4-201ENST00000370542 FARP2O94887 1054 aaPredicted RBP17.87■□□□□ 0.45
LMO4-201ENST00000370542 MTMR2Q13614 643 aa17.87■□□□□ 0.45
LMO4-201ENST00000370542 SHROOM1Q2M3G4 852 aaPredicted RBP17.87■□□□□ 0.45
LMO4-201ENST00000370542 CLASRPQ8N2M8 674 aaKnown RBP17.87■□□□□ 0.45
LMO4-201ENST00000370542 CRACR2BQ8N4Y2 399 aaPredicted RBP17.87■□□□□ 0.45
LMO4-201ENST00000370542 COA7Q96BR5 231 aa17.87■□□□□ 0.45
LMO4-201ENST00000370542 SAP30BPQ9UHR5 308 aaKnown RBP17.87■□□□□ 0.45
LMO4-201ENST00000370542 COG6Q9Y2V7 657 aa17.87■□□□□ 0.45
LMO4-201ENST00000370542 DDX60LQ5H9U9 1706 aaKnown RBP17.86■□□□□ 0.45
LMO4-201ENST00000370542 TCRBV5S4A2TA0A5A2 114 aa17.86■□□□□ 0.45
LMO4-201ENST00000370542 DDX11L8A8MPP1 907 aa17.86■□□□□ 0.45
LMO4-201ENST00000370542 GDF11O95390 407 aa17.86■□□□□ 0.45
LMO4-201ENST00000370542 C12orf42Q96LP6 360 aa17.86■□□□□ 0.45
LMO4-201ENST00000370542 RNF208Q9H0X6 261 aa17.86■□□□□ 0.45
LMO4-201ENST00000370542 CHMP4BQ9H444 224 aaKnown RBP17.86■□□□□ 0.45
LMO4-201ENST00000370542 PAK6Q9NQU5 681 aaPredicted RBP17.86■□□□□ 0.45
LMO4-201ENST00000370542 EMILIN3Q9NT22 766 aa17.86■□□□□ 0.45
LMO4-201ENST00000370542 CHMP5Q9NZZ3 219 aa17.86■□□□□ 0.45
LMO4-201ENST00000370542 SERPINB13Q9UIV8 391 aa17.86■□□□□ 0.45
LMO4-201ENST00000370542 SGPL1O95470 568 aa17.85■□□□□ 0.45
LMO4-201ENST00000370542 USP5P45974 858 aa17.85■□□□□ 0.45
LMO4-201ENST00000370542 GABPAQ06546 454 aa17.85■□□□□ 0.45
LMO4-201ENST00000370542 TTC6Q86TZ1 520 aa17.85■□□□□ 0.45
LMO4-201ENST00000370542 U2AF1L4Q8WU68 220 aaKnown RBP17.85■□□□□ 0.45
LMO4-201ENST00000370542 P2RX7Q99572 595 aaKnown RBP17.85■□□□□ 0.45
LMO4-201ENST00000370542 UNC93B1Q9H1C4 597 aa17.85■□□□□ 0.45
LMO4-201ENST00000370542 RWDD1Q9H446 243 aaPredicted RBP17.85■□□□□ 0.45
LMO4-201ENST00000370542 TMOD4Q9NZQ9 345 aa17.85■□□□□ 0.45
LMO4-201ENST00000370542 INHAP05111 366 aa17.84■□□□□ 0.45
LMO4-201ENST00000370542 ELNP15502 786 aa17.84■□□□□ 0.45
LMO4-201ENST00000370542 PDE6AP16499 860 aa17.84■□□□□ 0.45
LMO4-201ENST00000370542 POTEEQ6S8J3 1075 aa17.84■□□□□ 0.45
LMO4-201ENST00000370542 TRIM34Q9BYJ4 488 aa17.84■□□□□ 0.45
LMO4-201ENST00000370542 TAOK2Q9UL54 1235 aa17.84■□□□□ 0.45
LMO4-201ENST00000370542 PLXNB2O15031 1838 aa17.84■□□□□ 0.45
LMO4-201ENST00000370542 GH2P01242 217 aa17.83■□□□□ 0.44
LMO4-201ENST00000370542 KCNA4P22459 653 aa17.83■□□□□ 0.44
LMO4-201ENST00000370542 SHMT1P34896 483 aa17.83■□□□□ 0.44
LMO4-201ENST00000370542 PLCD1P51178 756 aa17.83■□□□□ 0.44
LMO4-201ENST00000370542 HERVK_113P62684 666 aa17.83■□□□□ 0.44
LMO4-201ENST00000370542 SLC9C2Q5TAH2 1124 aa17.83■□□□□ 0.44
LMO4-201ENST00000370542 USP17L2Q6R6M4 530 aa17.83■□□□□ 0.44
LMO4-201ENST00000370542 GTF3C2Q8WUA4 911 aaPredicted RBP17.83■□□□□ 0.44
LMO4-201ENST00000370542 CRISPLD2Q9H0B8 497 aa17.83■□□□□ 0.44
LMO4-201ENST00000370542 TXNRD2Q9NNW7 524 aa17.83■□□□□ 0.44
LMO4-201ENST00000370542 RBPJLQ9UBG7 517 aa17.83■□□□□ 0.44
LMO4-201ENST00000370542 BIN2Q9UBW5 565 aaPredicted RBP17.83■□□□□ 0.44
LMO4-201ENST00000370542 EYSQ5T1H1 3165 aa17.83■□□□□ 0.44
LMO4-201ENST00000370542 MAGEB6P1A0A0J9YX57 407 aa17.82■□□□□ 0.44
LMO4-201ENST00000370542 HSP90AA1P07900 732 aaKnown RBP17.82■□□□□ 0.44
LMO4-201ENST00000370542 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
LMO4-201ENST00000370542 ATP5JP18859 108 aa17.82■□□□□ 0.44
LMO4-201ENST00000370542 MCM4P33991 863 aa17.82■□□□□ 0.44
LMO4-201ENST00000370542 IRX3P78415 501 aaPredicted RBP17.82■□□□□ 0.44
LMO4-201ENST00000370542 SKAP1Q86WV1 359 aa17.82■□□□□ 0.44
LMO4-201ENST00000370542 KIAA1683Q9H0B3 1180 aa17.82■□□□□ 0.44
LMO4-201ENST00000370542 MUC3AQ02505 3323 aa17.82■□□□□ 0.44
LMO4-201ENST00000370542 RPTORQ8N122 1335 aa17.81■□□□□ 0.44
LMO4-201ENST00000370542 ZNF532Q9HCE3 1301 aa17.81■□□□□ 0.44
LMO4-201ENST00000370542 XRCC5P13010 732 aaKnown RBP17.81■□□□□ 0.44
LMO4-201ENST00000370542 COL9A1P20849 921 aa17.81■□□□□ 0.44
LMO4-201ENST00000370542 GUCY1A2P33402 732 aa17.81■□□□□ 0.44
LMO4-201ENST00000370542 CERKLQ49MI3 558 aaPredicted RBP17.81■□□□□ 0.44
LMO4-201ENST00000370542 GPRC5AQ8NFJ5 357 aa17.81■□□□□ 0.44
LMO4-201ENST00000370542 USP6NLQ92738 828 aa17.81■□□□□ 0.44
LMO4-201ENST00000370542 GOLIM4O00461 696 aa17.8■□□□□ 0.44
LMO4-201ENST00000370542 IGHDP01880 384 aa17.8■□□□□ 0.44
LMO4-201ENST00000370542 HMGCRP04035 888 aa17.8■□□□□ 0.44
LMO4-201ENST00000370542 SKOR2Q2VWA4 1001 aaPredicted RBP17.8■□□□□ 0.44
LMO4-201ENST00000370542 Q3C1V9 767 aa17.8■□□□□ 0.44
LMO4-201ENST00000370542 LBX2Q6XYB7 198 aa17.8■□□□□ 0.44
LMO4-201ENST00000370542 HAUS7Q99871 368 aa17.8■□□□□ 0.44
LMO4-201ENST00000370542 CRNKL1Q9BZJ0 848 aaKnown RBP17.8■□□□□ 0.44
LMO4-201ENST00000370542 DCP1AQ9NPI6 582 aaPredicted RBP17.8■□□□□ 0.44
LMO4-201ENST00000370542 RRAGDQ9NQL2 400 aaPredicted RBP17.8■□□□□ 0.44
LMO4-201ENST00000370542 ADD2P35612 726 aa17.79■□□□□ 0.44
LMO4-201ENST00000370542 USP14P54578 494 aa17.79■□□□□ 0.44
LMO4-201ENST00000370542 ERVK-9P63128 1117 aa17.79■□□□□ 0.44
LMO4-201ENST00000370542 ERVK-24P63145 666 aa17.79■□□□□ 0.44
LMO4-201ENST00000370542 ABCB5Q2M3G0 1257 aa17.79■□□□□ 0.44
LMO4-201ENST00000370542 MAP3K21Q5TCX8 1036 aa17.79■□□□□ 0.44
LMO4-201ENST00000370542 CATSPERGQ6ZRH7 1159 aa17.79■□□□□ 0.44
LMO4-201ENST00000370542 TDHQ8IZJ6 230 aa17.79■□□□□ 0.44
LMO4-201ENST00000370542 EDC3Q96F86 508 aaKnown RBP17.79■□□□□ 0.44
LMO4-201ENST00000370542 PAG1Q9NWQ8 432 aa17.79■□□□□ 0.44
LMO4-201ENST00000370542 CIZ1Q9ULV3 898 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms