RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 GINM1Q9NU53 330 aa18.9■□□□□ 0.62
SSR4-204ENST00000370087 RABGAP1Q9Y3P9 1069 aa18.9■□□□□ 0.62
SSR4-204ENST00000370087 IGHA2P01877 340 aa18.89■□□□□ 0.61
SSR4-204ENST00000370087 PTPREP23469 700 aa18.89■□□□□ 0.61
SSR4-204ENST00000370087 CYP2C19P33261 490 aa18.89■□□□□ 0.61
SSR4-204ENST00000370087 TTC39AQ5SRH9 613 aa18.89■□□□□ 0.61
SSR4-204ENST00000370087 WDR78Q5VTH9 848 aa18.89■□□□□ 0.61
SSR4-204ENST00000370087 ACER1Q8TDN7 264 aa18.89■□□□□ 0.61
SSR4-204ENST00000370087 LBHD1Q9BQE6 289 aaPredicted RBP18.89■□□□□ 0.61
SSR4-204ENST00000370087 CWC22Q9HCG8 908 aaKnown RBP18.89■□□□□ 0.61
SSR4-204ENST00000370087 ZNF316A6NFI3 1004 aaPredicted RBP18.88■□□□□ 0.61
SSR4-204ENST00000370087 SLC15A5A6NIM6 579 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 USP17L15C9J2P7 530 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 USP17L13C9JLJ4 530 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 USP17L11C9JVI0 530 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 USP17L18D6R9N7 530 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 USP17L22D6RA61 530 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 USP17L17D6RBQ6 530 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 USP17L19D6RCP7 530 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 USP17L20D6RJB6 530 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 CT47B1P0C2W7 299 aaPredicted RBP18.88■□□□□ 0.61
SSR4-204ENST00000370087 VCAM1P19320 739 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 CNGA1P29973 690 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 ZAP70P43403 619 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 USP17L24Q0WX57 530 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 GRB14Q14449 540 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 C9orf50Q5SZB4 431 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 MFSD14CQ5VZR4 134 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 CATSPERGQ6ZRH7 1159 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 LPAR1Q92633 364 aa18.88■□□□□ 0.61
SSR4-204ENST00000370087 DNM1LO00429 736 aa18.87■□□□□ 0.61
SSR4-204ENST00000370087 HOXC6P09630 235 aa18.87■□□□□ 0.61
SSR4-204ENST00000370087 G3BP1Q13283 466 aaKnown RBP eCLIP18.87■□□□□ 0.61
SSR4-204ENST00000370087 SHHQ15465 462 aa18.87■□□□□ 0.61
SSR4-204ENST00000370087 TNNI3KQ59H18 835 aa18.87■□□□□ 0.61
SSR4-204ENST00000370087 GJC2Q5T442 439 aaPredicted RBP18.87■□□□□ 0.61
SSR4-204ENST00000370087 ZNF697Q5TEC3 545 aa18.87■□□□□ 0.61
SSR4-204ENST00000370087 TATDN1Q6P1N9 297 aa18.87■□□□□ 0.61
SSR4-204ENST00000370087 CDX2Q99626 313 aaPredicted RBP18.87■□□□□ 0.61
SSR4-204ENST00000370087 FEZ1Q99689 392 aa18.87■□□□□ 0.61
SSR4-204ENST00000370087 FPGT-TNNI3KV9GXZ4 949 aa18.87■□□□□ 0.61
SSR4-204ENST00000370087 PARP14Q460N5 1801 aa18.86■□□□□ 0.61
SSR4-204ENST00000370087 SPDYE16A6NNV3 312 aaPredicted RBP18.86■□□□□ 0.61
SSR4-204ENST00000370087 GNAI2P04899 355 aa18.86■□□□□ 0.61
SSR4-204ENST00000370087 HLA-DOAP06340 250 aa18.86■□□□□ 0.61
SSR4-204ENST00000370087 CYBAP13498 195 aa18.86■□□□□ 0.61
SSR4-204ENST00000370087 ANO1Q5XXA6 986 aa18.86■□□□□ 0.61
SSR4-204ENST00000370087 MIGA1Q8NAN2 632 aa18.86■□□□□ 0.61
SSR4-204ENST00000370087 ARHGAP45Q92619 1136 aa18.86■□□□□ 0.61
SSR4-204ENST00000370087 TLR7Q9NYK1 1049 aaKnown RBP18.86■□□□□ 0.61
SSR4-204ENST00000370087 ATP11BQ9Y2G3 1177 aa18.86■□□□□ 0.61
SSR4-204ENST00000370087 TRIM27P14373 513 aa18.85■□□□□ 0.61
SSR4-204ENST00000370087 CCNA1P78396 465 aa18.85■□□□□ 0.61
SSR4-204ENST00000370087 ATP2B2Q01814 1243 aa18.85■□□□□ 0.61
SSR4-204ENST00000370087 EVX2Q03828 476 aa18.85■□□□□ 0.61
SSR4-204ENST00000370087 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
SSR4-204ENST00000370087 LBX2Q6XYB7 198 aa18.85■□□□□ 0.61
SSR4-204ENST00000370087 KIAA1683Q9H0B3 1180 aa18.85■□□□□ 0.61
SSR4-204ENST00000370087 GLRX3O76003 335 aaKnown RBP18.84■□□□□ 0.61
SSR4-204ENST00000370087 CYP7A1P22680 504 aa18.84■□□□□ 0.61
SSR4-204ENST00000370087 GUCY1A2P33402 732 aa18.84■□□□□ 0.61
SSR4-204ENST00000370087 TTYH1Q9H313 450 aaPredicted RBP18.84■□□□□ 0.61
SSR4-204ENST00000370087 RPAP3Q9H6T3 665 aaPredicted RBP18.84■□□□□ 0.61
SSR4-204ENST00000370087 GPR108Q9NPR9 543 aa18.84■□□□□ 0.61
SSR4-204ENST00000370087 MUC3AQ02505 3323 aa18.84■□□□□ 0.61
SSR4-204ENST00000370087 MSCO60682 206 aa18.83■□□□□ 0.6
SSR4-204ENST00000370087 SHMT1P34896 483 aa18.83■□□□□ 0.6
SSR4-204ENST00000370087 POLA2Q14181 598 aa18.83■□□□□ 0.6
SSR4-204ENST00000370087 TRIM60Q495X7 471 aa18.83■□□□□ 0.6
SSR4-204ENST00000370087 CCDC158Q5M9N0 1113 aa18.83■□□□□ 0.6
SSR4-204ENST00000370087 SH3RF1Q7Z6J0 888 aa18.83■□□□□ 0.6
SSR4-204ENST00000370087 MAFAQ8NHW3 353 aaPredicted RBP18.83■□□□□ 0.6
SSR4-204ENST00000370087 MYLIPQ8WY64 445 aa18.83■□□□□ 0.6
SSR4-204ENST00000370087 BADQ92934 168 aa18.83■□□□□ 0.6
SSR4-204ENST00000370087 SEMA6BQ9H3T3 888 aa18.83■□□□□ 0.6
SSR4-204ENST00000370087 PRDM5Q9NQX1 630 aaPredicted RBP18.83■□□□□ 0.6
SSR4-204ENST00000370087 SERPINB13Q9UIV8 391 aa18.83■□□□□ 0.6
SSR4-204ENST00000370087 DBNLQ9UJU6 430 aaKnown RBP18.83■□□□□ 0.6
SSR4-204ENST00000370087 COL11A1P12107 1806 aaPredicted RBP18.83■□□□□ 0.6
SSR4-204ENST00000370087 ABCB5Q2M3G0 1257 aa18.82■□□□□ 0.6
SSR4-204ENST00000370087 ATF7IPQ6VMQ6 1270 aa18.82■□□□□ 0.6
SSR4-204ENST00000370087 SLC39A5Q6ZMH5 540 aa18.82■□□□□ 0.6
SSR4-204ENST00000370087 MOV10L1Q9BXT6 1211 aaKnown RBP18.82■□□□□ 0.6
SSR4-204ENST00000370087 EHD4Q9H223 541 aa18.82■□□□□ 0.6
SSR4-204ENST00000370087 PDLIM7Q9NR12 457 aa18.82■□□□□ 0.6
SSR4-204ENST00000370087 PRKAG2Q9UGJ0 569 aa18.82■□□□□ 0.6
SSR4-204ENST00000370087 IVNS1ABPQ9Y6Y0 642 aa18.82■□□□□ 0.6
SSR4-204ENST00000370087 MYH8P13535 1937 aa18.82■□□□□ 0.6
SSR4-204ENST00000370087 ZNFX1Q9P2E3 1918 aaKnown RBP18.82■□□□□ 0.6
SSR4-204ENST00000370087 TRIM43BA6NCK2 446 aa18.81■□□□□ 0.6
SSR4-204ENST00000370087 ADORA2AP29274 412 aa18.81■□□□□ 0.6
SSR4-204ENST00000370087 USP5P45974 858 aa18.81■□□□□ 0.6
SSR4-204ENST00000370087 PLCD1P51178 756 aa18.81■□□□□ 0.6
SSR4-204ENST00000370087 USP14P54578 494 aa18.81■□□□□ 0.6
SSR4-204ENST00000370087 SNX17Q15036 470 aa18.81■□□□□ 0.6
SSR4-204ENST00000370087 CERKLQ49MI3 558 aaPredicted RBP18.81■□□□□ 0.6
SSR4-204ENST00000370087 MAGEB6Q8N7X4 407 aa18.81■□□□□ 0.6
SSR4-204ENST00000370087 CLUAP1Q96AJ1 413 aa18.81■□□□□ 0.6
SSR4-204ENST00000370087 TRIM43Q96BQ3 446 aaPredicted RBP18.81■□□□□ 0.6
SSR4-204ENST00000370087 ZNF512BQ96KM6 892 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms