RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 NID2Q14112 1375 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 STK36Q9NRP7 1315 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 SF3B2Q13435 895 aaKnown RBP11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 PTPN14Q15678 1187 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 BRAPQ7Z569 592 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 CATIPQ7Z7H3 387 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 FANCBQ8NB91 859 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 SLC26A6Q9BXS9 759 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 BTDP43251 543 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 CCDC144BQ3MJ40 725 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 TGFBRAP1Q8WUH2 860 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 RTFDC1Q9BY42 306 aaPredicted RBP11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 FEZ2Q9UHY8 353 aaPredicted RBP11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 GPR75-ASB3A0A0A6YYF3 556 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 FMNL1O95466 1100 aaPredicted RBP11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 CYP2D6P10635 497 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 C12orf60Q5U649 245 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 STYK1Q6J9G0 422 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 FAM163AQ96GL9 167 aaPredicted RBP11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 DNAJC25Q9H1X3 360 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 SUGT1Q9Y2Z0 365 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 LAMB1P07942 1786 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 LTBP1Q14766 1721 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 MYH15Q9Y2K3 1946 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 CALM1P0DP23 149 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 CALM2P0DP24 149 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 CALM3P0DP25 149 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 LIG1P18858 919 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 GNL2Q13823 731 aaKnown RBP11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 RCOR1Q9UKL0 485 aa11.46□□□□□ -0.57
PRPF38B-203ENST00000370025 TSPY2A6NKD2 308 aa11.46□□□□□ -0.58
PRPF38B-203ENST00000370025 POLR3DP05423 398 aaPredicted RBP11.46□□□□□ -0.58
PRPF38B-203ENST00000370025 TYRO3Q06418 890 aa11.46□□□□□ -0.58
PRPF38B-203ENST00000370025 KLHL34Q8N239 644 aa11.46□□□□□ -0.58
PRPF38B-203ENST00000370025 LRRN4CLQ8ND94 238 aa11.46□□□□□ -0.58
PRPF38B-203ENST00000370025 SECISBP2LQ93073 1101 aaKnown RBP11.46□□□□□ -0.58
PRPF38B-203ENST00000370025 MKRN1Q9UHC7 482 aaKnown RBP11.46□□□□□ -0.58
PRPF38B-203ENST00000370025 KRT40Q6A162 431 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 KRBA2Q6ZNG9 492 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 TEX11Q8IYF3 940 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 USP28Q96RU2 1077 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 AKAP17AQ02040 695 aaKnown RBP11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 OLFM4Q6UX06 510 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 TNMDQ9H2S6 317 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 MKNK2Q9HBH9 465 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 ZNF287Q9HBT7 754 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 CBX8Q9HC52 389 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 FAM47AQ5JRC9 791 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 MAPKAPK5Q8IW41 473 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 FAM200AQ8TCP9 573 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 CNKSR1Q969H4 720 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 CCDC34Q96HJ3 373 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 AIFM3Q96NN9 605 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 NUP62CLQ9H1M0 184 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 RBM28Q9NW13 759 aaKnown RBP11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 DACT1Q9NYF0 836 aa11.45□□□□□ -0.58
PRPF38B-203ENST00000370025 COL11A2P13942 1736 aaPredicted RBP11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 BAG6P46379 1132 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 KIF23Q02241 960 aaPredicted RBP11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 MAP3K11Q16584 847 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 DOK7Q18PE1 504 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 SLC4A8Q2Y0W8 1093 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 ILDR1Q86SU0 546 aaPredicted RBP11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 CRACR2BQ8N4Y2 399 aaPredicted RBP11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 GPATCH11Q8N954 259 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 GJB4Q9NTQ9 266 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 ZNF446Q9NWS9 450 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 PAXBP1Q9Y5B6 917 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 ANKRD65E5RJM6 399 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 DDAH1O94760 285 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 DEXIO95424 95 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 TPM3P06753 285 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 SAFBQ15424 915 aaKnown RBP eCLIP11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 CCDC178Q5BJE1 867 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 SYT10Q6XYQ8 523 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 ZNF444Q8N0Y2 327 aaPredicted RBP11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 FAM177A1Q8N128 213 aaPredicted RBP11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 CCDC82Q8N4S0 544 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 PGBD1Q96JS3 809 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 EPC1Q9H2F5 836 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 DDX19AQ9NUU7 478 aaKnown RBP11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 RTEL1Q9NZ71 1219 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 GAKO14976 1311 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 SKILP12757 684 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 EVX2Q03828 476 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 MYSM1Q5VVJ2 828 aa11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 ERCC4Q92889 916 aaPredicted RBP11.44□□□□□ -0.58
PRPF38B-203ENST00000370025 SEC31AO94979 1220 aaKnown RBP11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 STK38Q15208 465 aa11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 SF3A1Q15459 793 aaKnown RBP11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 SAP30BPQ9UHR5 308 aaKnown RBP11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 LOC102724159A0A0B4J2E5 919 aa11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 ME1P48163 572 aa11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 ZNF165P49910 485 aa11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 TFAP4Q01664 338 aa11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 PWP2Q15269 919 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms