RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 CAPZA3Q96KX2 299 aa20.16■□□□□ 0.82
CHTOP-201ENST00000368686 EPN1Q9Y6I3 576 aaPredicted RBP20.16■□□□□ 0.82
CHTOP-201ENST00000368686 NDUFA10O95299 355 aa20.15■□□□□ 0.82
CHTOP-201ENST00000368686 NUP88Q99567 741 aaPredicted RBP20.15■□□□□ 0.82
CHTOP-201ENST00000368686 MAST3O60307 1309 aa20.15■□□□□ 0.82
CHTOP-201ENST00000368686 HSF2BPO75031 334 aa20.15■□□□□ 0.82
CHTOP-201ENST00000368686 SRGAP2O75044 1071 aa20.15■□□□□ 0.82
CHTOP-201ENST00000368686 EZRP15311 586 aaKnown RBP20.15■□□□□ 0.82
CHTOP-201ENST00000368686 PROSER3Q2NL68 480 aa20.15■□□□□ 0.82
CHTOP-201ENST00000368686 TTMPQ5BVD1 217 aa20.15■□□□□ 0.82
CHTOP-201ENST00000368686 SLC40A1Q9NP59 571 aa20.15■□□□□ 0.82
CHTOP-201ENST00000368686 PAG1Q9NWQ8 432 aa20.15■□□□□ 0.82
CHTOP-201ENST00000368686 GOLGA6L7A0A1B0GV03 622 aa20.14■□□□□ 0.81
CHTOP-201ENST00000368686 RNF187Q5TA31 235 aaPredicted RBP20.14■□□□□ 0.81
CHTOP-201ENST00000368686 ACTR5Q9H9F9 607 aaPredicted RBP20.14■□□□□ 0.81
CHTOP-201ENST00000368686 TRIM10Q9UDY6 481 aa20.14■□□□□ 0.81
CHTOP-201ENST00000368686 REXO2Q9Y3B8 237 aaKnown RBP20.14■□□□□ 0.81
CHTOP-201ENST00000368686 WDR19Q8NEZ3 1342 aa20.14■□□□□ 0.81
CHTOP-201ENST00000368686 ANO9A1A5B4 782 aa20.14■□□□□ 0.81
CHTOP-201ENST00000368686 LSP1P33241 339 aa20.14■□□□□ 0.81
CHTOP-201ENST00000368686 MAP2K1Q02750 393 aaPredicted RBP20.14■□□□□ 0.81
CHTOP-201ENST00000368686 CUL4BQ13620 913 aa20.14■□□□□ 0.81
CHTOP-201ENST00000368686 KDM7AQ6ZMT4 941 aa20.14■□□□□ 0.81
CHTOP-201ENST00000368686 ZNF662Q6ZS27 426 aa20.14■□□□□ 0.81
CHTOP-201ENST00000368686 MB21D2Q8IYB1 491 aaPredicted RBP20.14■□□□□ 0.81
CHTOP-201ENST00000368686 ZNF473Q8WTR7 871 aaKnown RBP20.14■□□□□ 0.81
CHTOP-201ENST00000368686 BTBD11A6QL63 1104 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 HOXC9P31274 260 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 EPHB4P54760 987 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 IMMTQ16891 758 aaKnown RBP20.13■□□□□ 0.81
CHTOP-201ENST00000368686 SPECC1Q5M775 1068 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 EMBQ6PCB8 327 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 MMGT1Q8N4V1 131 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 AIFM3Q96NN9 605 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 PTPREP23469 700 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 CLNS1AP54105 237 aaKnown RBP20.13■□□□□ 0.81
CHTOP-201ENST00000368686 TRIM29Q14134 588 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 ZKSCAN8Q15776 578 aaPredicted RBP20.13■□□□□ 0.81
CHTOP-201ENST00000368686 RAB11FIP4Q86YS3 637 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 STK11IPQ8N1F8 1099 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 ARL8AQ96BM9 186 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 RRP36Q96EU6 259 aaKnown RBP20.13■□□□□ 0.81
CHTOP-201ENST00000368686 CENPHQ9H3R5 247 aa20.13■□□□□ 0.81
CHTOP-201ENST00000368686 SRRM3A6NNA2 597 aaPredicted RBP20.12■□□□□ 0.81
CHTOP-201ENST00000368686 ACTN4O43707 911 aaKnown RBP20.12■□□□□ 0.81
CHTOP-201ENST00000368686 RTN2O75298 545 aa20.12■□□□□ 0.81
CHTOP-201ENST00000368686 KRT9P35527 623 aa20.12■□□□□ 0.81
CHTOP-201ENST00000368686 CCDC122Q5T0U0 273 aa20.12■□□□□ 0.81
CHTOP-201ENST00000368686 EMC10Q5UCC4 262 aa20.12■□□□□ 0.81
CHTOP-201ENST00000368686 PARP9Q8IXQ6 854 aa20.12■□□□□ 0.81
CHTOP-201ENST00000368686 GRAMD1CQ8IYS0 662 aa20.12■□□□□ 0.81
CHTOP-201ENST00000368686 ZNF579Q8NAF0 562 aaKnown RBP20.12■□□□□ 0.81
CHTOP-201ENST00000368686 ATP6V0A4Q9HBG4 840 aa20.12■□□□□ 0.81
CHTOP-201ENST00000368686 DDX20Q9UHI6 824 aaKnown RBP20.12■□□□□ 0.81
CHTOP-201ENST00000368686 SARNPP82979 210 aaKnown RBP20.11■□□□□ 0.81
CHTOP-201ENST00000368686 ATP2B2Q01814 1243 aa20.11■□□□□ 0.81
CHTOP-201ENST00000368686 NAIF1Q69YI7 327 aaPredicted RBP20.11■□□□□ 0.81
CHTOP-201ENST00000368686 KLHL10Q6JEL2 608 aa20.11■□□□□ 0.81
CHTOP-201ENST00000368686 CEP57Q86XR8 500 aa20.11■□□□□ 0.81
CHTOP-201ENST00000368686 RNF217Q8TC41 542 aa20.11■□□□□ 0.81
CHTOP-201ENST00000368686 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
CHTOP-201ENST00000368686 FBXO2Q9UK22 296 aaPredicted RBP20.11■□□□□ 0.81
CHTOP-201ENST00000368686 CPDO75976 1380 aa20.11■□□□□ 0.81
CHTOP-201ENST00000368686 ECM29Q5VYK3 1845 aa20.11■□□□□ 0.81
CHTOP-201ENST00000368686 RFX5P48382 616 aaPredicted RBP20.11■□□□□ 0.81
CHTOP-201ENST00000368686 STX17P56962 302 aa20.11■□□□□ 0.81
CHTOP-201ENST00000368686 APBA1Q02410 837 aa20.11■□□□□ 0.81
CHTOP-201ENST00000368686 PTPN12Q05209 780 aaKnown RBP20.11■□□□□ 0.81
CHTOP-201ENST00000368686 ITIH3Q06033 890 aa20.11■□□□□ 0.81
CHTOP-201ENST00000368686 NCOA7Q8NI08 942 aa20.11■□□□□ 0.81
CHTOP-201ENST00000368686 LIMA1Q9UHB6 759 aaKnown RBP20.11■□□□□ 0.81
CHTOP-201ENST00000368686 N4BP3O15049 544 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 RNF113AO15541 343 aaKnown RBP20.1■□□□□ 0.81
CHTOP-201ENST00000368686 KRT86O43790 486 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 SLC8A1P32418 973 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 C2orf54Q08AI8 447 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 RALYLQ86SE5 291 aaKnown RBP20.1■□□□□ 0.81
CHTOP-201ENST00000368686 CAVIN3Q969G5 261 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 SLC24A3Q9HC58 644 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 NWD2Q9ULI1 1742 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 MYO5AQ9Y4I1 1855 aaKnown RBP20.1■□□□□ 0.81
CHTOP-201ENST00000368686 PDE2AO00408 941 aaPredicted RBP20.1■□□□□ 0.81
CHTOP-201ENST00000368686 PPP1R37O75864 691 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 IGKV5-2P06315 115 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 ANTXR2P58335 489 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 KRT83P78385 493 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 PTGISQ16647 500 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 EPHA10Q5JZY3 1008 aa20.1■□□□□ 0.81
CHTOP-201ENST00000368686 MST1RQ04912 1400 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 LRRC10BA6NIK2 292 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 CD44P16070 742 aaKnown RBP20.09■□□□□ 0.81
CHTOP-201ENST00000368686 CCT6AP40227 531 aaKnown RBP20.09■□□□□ 0.81
CHTOP-201ENST00000368686 ATP1A2P50993 1020 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 HDGFP51858 240 aaKnown RBP20.09■□□□□ 0.81
CHTOP-201ENST00000368686 SPAG1Q07617 926 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 NNTQ13423 1086 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 TLDC1Q6P9B6 456 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 CYB5D1Q6P9G0 228 aa20.09■□□□□ 0.81
CHTOP-201ENST00000368686 FNBP4Q8N3X1 1017 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-201ENST00000368686 AIDAQ96BJ3 306 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms