RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.11□□□□□ -0.31
TUBE1-201ENST00000368657 YBX2Q9Y2T7 364 aaKnown RBP13.11□□□□□ -0.31
TUBE1-201ENST00000368657 CHMP3Q9Y3E7 222 aa13.11□□□□□ -0.31
TUBE1-201ENST00000368657 LOC285556D6RIA3 1793 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 USP17L5A8MUK1 530 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 PEX10O60683 326 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 IGHA2P01877 340 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 PTPREP23469 700 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 RGS3P49796 1198 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 PTPN5P54829 565 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 FOXO4P98177 505 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 PPP2R2DQ66LE6 453 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 WDR66Q8TBY9 1149 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 PRRX2Q99811 253 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
TUBE1-201ENST00000368657 POTEB3A0JP26 581 aa13.09□□□□□ -0.31
TUBE1-201ENST00000368657 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
TUBE1-201ENST00000368657 NEUROD2Q15784 382 aa13.09□□□□□ -0.31
TUBE1-201ENST00000368657 POTEBQ6S5H4 581 aa13.09□□□□□ -0.31
TUBE1-201ENST00000368657 SH3BP5LQ7L8J4 393 aa13.09□□□□□ -0.31
TUBE1-201ENST00000368657 ZNF594Q96JF6 807 aaPredicted RBP13.09□□□□□ -0.31
TUBE1-201ENST00000368657 PCDHA11Q9Y5I1 949 aa13.09□□□□□ -0.31
TUBE1-201ENST00000368657 IVNS1ABPQ9Y6Y0 642 aa13.09□□□□□ -0.31
TUBE1-201ENST00000368657 TRANK1O15050 2925 aa13.09□□□□□ -0.31
TUBE1-201ENST00000368657 C19orf81C9J6K1 198 aa13.08□□□□□ -0.32
TUBE1-201ENST00000368657 DCXO43602 365 aa13.08□□□□□ -0.32
TUBE1-201ENST00000368657 GFRA3O60609 400 aa13.08□□□□□ -0.32
TUBE1-201ENST00000368657 FGBP02675 491 aa13.08□□□□□ -0.32
TUBE1-201ENST00000368657 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
TUBE1-201ENST00000368657 EPHA10Q5JZY3 1008 aa13.08□□□□□ -0.32
TUBE1-201ENST00000368657 ANO1Q5XXA6 986 aa13.08□□□□□ -0.32
TUBE1-201ENST00000368657 OLFML2BQ68BL8 750 aa13.08□□□□□ -0.32
TUBE1-201ENST00000368657 MBIPQ9NS73 344 aa13.08□□□□□ -0.32
TUBE1-201ENST00000368657 RABGAP1Q9Y3P9 1069 aa13.08□□□□□ -0.32
TUBE1-201ENST00000368657 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
TUBE1-201ENST00000368657 DDTLA6NHG4 134 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-201ENST00000368657 CSF2RAP15509 400 aa13.07□□□□□ -0.32
TUBE1-201ENST00000368657 ZEB1P37275 1124 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-201ENST00000368657 BACE1P56817 501 aa13.07□□□□□ -0.32
TUBE1-201ENST00000368657 LMBR1LQ6UX01 489 aa13.07□□□□□ -0.32
TUBE1-201ENST00000368657 RNF180Q86T96 592 aa13.07□□□□□ -0.32
TUBE1-201ENST00000368657 NPLOC4Q8TAT6 608 aa13.07□□□□□ -0.32
TUBE1-201ENST00000368657 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
TUBE1-201ENST00000368657 PAGR1Q9BTK6 254 aa13.07□□□□□ -0.32
TUBE1-201ENST00000368657 WDR18Q9BV38 432 aa13.07□□□□□ -0.32
TUBE1-201ENST00000368657 TBX21Q9UL17 535 aa13.07□□□□□ -0.32
TUBE1-201ENST00000368657 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
TUBE1-201ENST00000368657 MROH5Q6ZUA9 1318 aa13.07□□□□□ -0.32
TUBE1-201ENST00000368657 DOCK2Q92608 1830 aa13.06□□□□□ -0.32
TUBE1-201ENST00000368657 RGS20O76081 388 aa13.06□□□□□ -0.32
TUBE1-201ENST00000368657 CAP2P40123 477 aa13.06□□□□□ -0.32
TUBE1-201ENST00000368657 GRB14Q14449 540 aa13.06□□□□□ -0.32
TUBE1-201ENST00000368657 DIXDC1Q155Q3 683 aa13.06□□□□□ -0.32
TUBE1-201ENST00000368657 WDR78Q5VTH9 848 aa13.06□□□□□ -0.32
TUBE1-201ENST00000368657 DPP9Q86TI2 863 aa13.06□□□□□ -0.32
TUBE1-201ENST00000368657 IL23AQ9NPF7 189 aa13.06□□□□□ -0.32
TUBE1-201ENST00000368657 A0A1W2PQ45 241 aaPredicted RBP13.05□□□□□ -0.32
TUBE1-201ENST00000368657 A0A1W2PQY0 241 aa13.05□□□□□ -0.32
TUBE1-201ENST00000368657 ACRP10323 421 aa13.05□□□□□ -0.32
TUBE1-201ENST00000368657 HFE2Q6ZVN8 426 aa13.05□□□□□ -0.32
TUBE1-201ENST00000368657 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
TUBE1-201ENST00000368657 LINS1Q8NG48 757 aa13.05□□□□□ -0.32
TUBE1-201ENST00000368657 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
TUBE1-201ENST00000368657 TSEN34Q9BSV6 310 aaKnown RBP13.05□□□□□ -0.32
TUBE1-201ENST00000368657 NDUFB9Q9Y6M9 179 aa13.05□□□□□ -0.32
TUBE1-201ENST00000368657 MROH7Q68CQ1 1323 aa13.05□□□□□ -0.32
TUBE1-201ENST00000368657 C5orf42Q9H799 3197 aa13.04□□□□□ -0.32
TUBE1-201ENST00000368657 SPTBN4Q9H254 2564 aa13.04□□□□□ -0.32
TUBE1-201ENST00000368657 RFXAPO00287 272 aa13.04□□□□□ -0.32
TUBE1-201ENST00000368657 MAP3K13O43283 966 aa13.04□□□□□ -0.32
TUBE1-201ENST00000368657 SLURP2P0DP57 97 aa13.04□□□□□ -0.32
TUBE1-201ENST00000368657 MTMR2Q13614 643 aa13.04□□□□□ -0.32
TUBE1-201ENST00000368657 XPNPEP3Q9NQH7 507 aa13.04□□□□□ -0.32
TUBE1-201ENST00000368657 GAKO14976 1311 aa13.04□□□□□ -0.32
TUBE1-201ENST00000368657 ZNF318Q5VUA4 2279 aa13.04□□□□□ -0.32
TUBE1-201ENST00000368657 APBB1O00213 710 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 STRNO43815 780 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 LDHBP07195 334 aaKnown RBP13.03□□□□□ -0.32
TUBE1-201ENST00000368657 ZNF853P0CG23 659 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 RARBP10826 455 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 RABGGTBP53611 331 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 PKN1Q16512 942 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 FAM47AQ5JRC9 791 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 PRSS33Q8NF86 280 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 STK31Q9BXU1 1019 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 STARD7Q9NQZ5 370 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 SLC5A4Q9NY91 659 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 SLC4A7Q9Y6M7 1214 aa13.03□□□□□ -0.32
TUBE1-201ENST00000368657 USP17L10C9JJH3 530 aa13.02□□□□□ -0.33
TUBE1-201ENST00000368657 KRT37O76014 449 aa13.02□□□□□ -0.33
TUBE1-201ENST00000368657 LEXMQ3ZCV2 418 aa13.02□□□□□ -0.33
TUBE1-201ENST00000368657 PUS3Q9BZE2 481 aaKnown RBP13.02□□□□□ -0.33
TUBE1-201ENST00000368657 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
TUBE1-201ENST00000368657 NRBP1Q9UHY1 535 aa13.02□□□□□ -0.33
TUBE1-201ENST00000368657 KIF16BQ96L93 1317 aa13.02□□□□□ -0.33
TUBE1-201ENST00000368657 GBF1Q92538 1859 aa13.02□□□□□ -0.33
TUBE1-201ENST00000368657 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-201ENST00000368657 CNMDO75829 334 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms