RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 CLRN2A0PK11 232 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 CHRNA5P30532 468 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 STAT2P52630 851 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 FKBP1CQ5VVH2 108 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 NBPF10Q6P3W6 841 aaKnown RBP9.41□□□□□ -0.9
SSR2-202ENST00000368311 PIBF1Q8WXW3 757 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 GOLGA1Q92805 767 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 CIZ1Q9ULV3 898 aaPredicted RBP9.41□□□□□ -0.9
SSR2-202ENST00000368311 ATP8B3O60423 1300 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 FKTNO75072 461 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 BMP3P12645 472 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 ZSCAN20P17040 1043 aaPredicted RBP9.41□□□□□ -0.9
SSR2-202ENST00000368311 SDSP20132 328 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 KCNJ6P48051 423 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 NBR1Q14596 966 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 FAM43BQ6ZT52 329 aaPredicted RBP9.41□□□□□ -0.9
SSR2-202ENST00000368311 SSH3Q8TE77 659 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 KIFC2Q96AC6 838 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 CAMKK2Q96RR4 588 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 PFASO15067 1338 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 CXCL11O14625 94 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 FAM13AO94988 1023 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 GYG1P46976 350 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 PPP1R18Q6NYC8 613 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 FAM200AQ8TCP9 573 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 ATP6V0A1Q93050 837 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 MMP19Q99542 508 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 MAF1Q9H063 256 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 ARMT1Q9H993 441 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 PDS5AQ29RF7 1337 aaKnown RBP9.41□□□□□ -0.9
SSR2-202ENST00000368311 GPAA1O43292 621 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 YARSP54577 528 aaKnown RBP9.41□□□□□ -0.9
SSR2-202ENST00000368311 DNTTIP2Q5QJE6 756 aaKnown RBP9.41□□□□□ -0.9
SSR2-202ENST00000368311 SLC26A6Q9BXS9 759 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 POLR3EQ9NVU0 708 aa9.41□□□□□ -0.9
SSR2-202ENST00000368311 ZNF853P0CG23 659 aa9.4□□□□□ -0.9
SSR2-202ENST00000368311 RNF180Q86T96 592 aa9.4□□□□□ -0.9
SSR2-202ENST00000368311 HAUS7Q99871 368 aa9.4□□□□□ -0.9
SSR2-202ENST00000368311 KLF18A0A0U1RQI7 1052 aa9.4□□□□□ -0.9
SSR2-202ENST00000368311 CCDC129Q6ZRS4 1044 aa9.4□□□□□ -0.9
SSR2-202ENST00000368311 DHX32Q7L7V1 743 aaKnown RBP9.4□□□□□ -0.9
SSR2-202ENST00000368311 CLIP2Q9UDT6 1046 aa9.4□□□□□ -0.9
SSR2-202ENST00000368311 CCL15-CCL14A0A0B4J2E2 113 aa9.4□□□□□ -0.9
SSR2-202ENST00000368311 PLCD1P51178 756 aa9.4□□□□□ -0.9
SSR2-202ENST00000368311 SETQ01105 290 aaPredicted RBP9.4□□□□□ -0.9
SSR2-202ENST00000368311 CCL15Q16663 113 aa9.4□□□□□ -0.9
SSR2-202ENST00000368311 ZFYVE27Q5T4F4 411 aa9.4□□□□□ -0.9
SSR2-202ENST00000368311 ZBED2Q9BTP6 218 aa9.4□□□□□ -0.9
SSR2-202ENST00000368311 CHD2O14647 1828 aaKnown RBP9.4□□□□□ -0.9
SSR2-202ENST00000368311 WDR46O15213 610 aaKnown RBP9.4□□□□□ -0.91
SSR2-202ENST00000368311 ME1P48163 572 aa9.4□□□□□ -0.91
SSR2-202ENST00000368311 TTLL4Q14679 1199 aa9.4□□□□□ -0.91
SSR2-202ENST00000368311 KMT5BQ4FZB7 885 aa9.4□□□□□ -0.91
SSR2-202ENST00000368311 AKNAD1Q5T1N1 836 aa9.4□□□□□ -0.91
SSR2-202ENST00000368311 HS2ST1Q7LGA3 356 aa9.4□□□□□ -0.91
SSR2-202ENST00000368311 GGA3Q9NZ52 723 aa9.4□□□□□ -0.91
SSR2-202ENST00000368311 CCDC24Q8N4L8 307 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 DPP7Q9UHL4 492 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 USP25Q9UHP3 1055 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 GLTPD2A6NH11 291 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 TOMM70O94826 608 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 RPL13P26373 211 aaKnown RBP9.39□□□□□ -0.91
SSR2-202ENST00000368311 BRAPQ7Z569 592 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 NT5C3AQ9H0P0 336 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.39□□□□□ -0.91
SSR2-202ENST00000368311 PITPNM2Q9BZ72 1349 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 ALAS1P13196 640 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 KYAT1Q16773 422 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 PCSK9Q8NBP7 692 aaKnown RBP9.39□□□□□ -0.91
SSR2-202ENST00000368311 CHST13Q8NET6 341 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 GLG1Q92896 1179 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 GCNAQ96QF7 691 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 LLPHQ9BRT6 129 aaKnown RBP9.39□□□□□ -0.91
SSR2-202ENST00000368311 TEKT3Q9BXF9 490 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 GPCPD1Q9NPB8 672 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 USP17L12C9JPN9 530 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 USP17L21D6R901 530 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 NKRFO15226 690 aaKnown RBP eCLIP9.39□□□□□ -0.91
SSR2-202ENST00000368311 SRGNP10124 158 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 MYCLP12524 364 aaPredicted RBP9.39□□□□□ -0.91
SSR2-202ENST00000368311 GCFC2P16383 781 aaKnown RBP9.39□□□□□ -0.91
SSR2-202ENST00000368311 GPRC5AQ8NFJ5 357 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 ZNF512BQ96KM6 892 aaPredicted RBP9.39□□□□□ -0.91
SSR2-202ENST00000368311 AAASQ9NRG9 546 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 ADCY9O60503 1353 aa9.39□□□□□ -0.91
SSR2-202ENST00000368311 POLRMTO00411 1230 aaKnown RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 PHACTR2O75167 634 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 TFAP4Q01664 338 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 NMIQ13287 307 aaPredicted RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 NEDD9Q14511 834 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 NONOQ15233 471 aaKnown RBP eCLIP9.38□□□□□ -0.91
SSR2-202ENST00000368311 NOM1Q5C9Z4 860 aaKnown RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 MICU3Q86XE3 530 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 TCP11Q8WWU5 503 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 NTSR2O95665 410 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 TFRCP02786 760 aaKnown RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 PDE6AP16499 860 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 SYDE2Q5VT97 1194 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 FAM83AQ86UY5 434 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms