RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CAMK4Q16566 473 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 TPD52L1Q16890 204 aaPredicted RBP13.33□□□□□ -0.28
USF1-201ENST00000368019 SUPT20HL1Q3ZLR7 823 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 CEP135Q66GS9 1140 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 FERMT3Q86UX7 667 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 IFNL1Q8IU54 200 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 CKAP2LQ8IYA6 745 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 FAM84BQ96KN1 310 aaPredicted RBP13.33□□□□□ -0.28
USF1-201ENST00000368019 DNAJC25Q9H1X3 360 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 GPR108Q9NPR9 543 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 CNNM1Q9NRU3 951 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 HELLSQ9NRZ9 838 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 FAM53CQ9NYF3 392 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 JAG2Q9Y219 1238 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 RIPOR2Q9Y4F9 1068 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.28
USF1-201ENST00000368019 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
USF1-201ENST00000368019 IGF2BP3O00425 579 aaKnown RBP eCLIP13.32□□□□□ -0.28
USF1-201ENST00000368019 GJA5P36382 358 aa13.32□□□□□ -0.28
USF1-201ENST00000368019 FAM160A1Q05DH4 1040 aa13.32□□□□□ -0.28
USF1-201ENST00000368019 RASA3Q14644 834 aa13.32□□□□□ -0.28
USF1-201ENST00000368019 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
USF1-201ENST00000368019 CEP57L1Q8IYX8 460 aa13.32□□□□□ -0.28
USF1-201ENST00000368019 CCDC150Q8NCX0 1101 aa13.32□□□□□ -0.28
USF1-201ENST00000368019 ENGASEQ8NFI3 743 aa13.32□□□□□ -0.28
USF1-201ENST00000368019 TSC1Q92574 1164 aa13.32□□□□□ -0.28
USF1-201ENST00000368019 HAUS7Q99871 368 aa13.32□□□□□ -0.28
USF1-201ENST00000368019 PUS3Q9BZE2 481 aaKnown RBP13.32□□□□□ -0.28
USF1-201ENST00000368019 BOLA2Q9H3K6 86 aa13.32□□□□□ -0.28
USF1-201ENST00000368019 MKI67P46013 3256 aaKnown RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 CCP110O43303 1012 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 NRDCO43847 1150 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 KINO60870 393 aaKnown RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 U2AF2P26368 475 aaKnown RBP eCLIP13.31□□□□□ -0.28
USF1-201ENST00000368019 HIBADHP31937 336 aaKnown RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 GYG1P46976 350 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 RFX5P48382 616 aaPredicted RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 EVCP57679 992 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 CCZ1BP86790 482 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 CCZ1P86791 482 aaPredicted RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 PTPN14Q15678 1187 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 TNNI3KQ59H18 835 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 TAF7LQ5H9L4 462 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 MFSD14BQ5SR56 506 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 DHX32Q7L7V1 743 aaKnown RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 ZNF589Q86UQ0 364 aaPredicted RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 NSUN7Q8NE18 718 aaKnown RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 ZNF274Q96GC6 653 aaPredicted RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 C16orf45Q96MC5 204 aaPredicted RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 TEPSINQ96N21 525 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 CCDC8Q9H0W5 538 aaPredicted RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 VEZTQ9HBM0 779 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 TFIP11Q9UBB9 837 aaKnown RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 ZNF70Q9UC06 446 aaPredicted RBP13.31□□□□□ -0.28
USF1-201ENST00000368019 SERPINA10Q9UK55 444 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 FPGT-TNNI3KV9GXZ4 949 aa13.31□□□□□ -0.28
USF1-201ENST00000368019 TESPA1A2RU30 521 aaPredicted RBP13.3□□□□□ -0.28
USF1-201ENST00000368019 BECN2A8MW95 431 aa13.3□□□□□ -0.28
USF1-201ENST00000368019 IREB2P48200 963 aaKnown RBP13.3□□□□□ -0.28
USF1-201ENST00000368019 LRMPQ12912 555 aa13.3□□□□□ -0.28
USF1-201ENST00000368019 CCDC144BQ3MJ40 725 aa13.3□□□□□ -0.28
USF1-201ENST00000368019 FAM173BQ6P4H8 233 aa13.3□□□□□ -0.28
USF1-201ENST00000368019 Q6ZUG5 572 aa13.3□□□□□ -0.28
USF1-201ENST00000368019 FBXO33Q7Z6M2 555 aa13.3□□□□□ -0.28
USF1-201ENST00000368019 CCAR1Q8IX12 1150 aaKnown RBP13.3□□□□□ -0.28
USF1-201ENST00000368019 CCDC144CPQ8IYA2 1237 aa13.3□□□□□ -0.28
USF1-201ENST00000368019 ANKRD13AQ8IZ07 590 aa13.3□□□□□ -0.28
USF1-201ENST00000368019 KBTBD3Q8NAB2 608 aa13.3□□□□□ -0.28
USF1-201ENST00000368019 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
USF1-201ENST00000368019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.3□□□□□ -0.28
USF1-201ENST00000368019 TTF2Q9UNY4 1162 aaKnown RBP13.3□□□□□ -0.28
USF1-201ENST00000368019 RBBP6Q7Z6E9 1792 aaKnown RBP13.3□□□□□ -0.28
USF1-201ENST00000368019 YEATS4O95619 227 aa13.29□□□□□ -0.28
USF1-201ENST00000368019 RBM5P52756 815 aaKnown RBP eCLIP13.29□□□□□ -0.28
USF1-201ENST00000368019 EXOSC10Q01780 885 aaKnown RBP13.29□□□□□ -0.28
USF1-201ENST00000368019 SCRN1Q12765 414 aa13.29□□□□□ -0.28
USF1-201ENST00000368019 GRIK5Q16478 980 aa13.29□□□□□ -0.28
USF1-201ENST00000368019 CCAR2Q8N163 923 aaKnown RBP13.29□□□□□ -0.28
USF1-201ENST00000368019 KRT222Q8N1A0 295 aa13.29□□□□□ -0.28
USF1-201ENST00000368019 PTPN18Q99952 460 aa13.29□□□□□ -0.28
USF1-201ENST00000368019 TDRD3Q9H7E2 651 aaKnown RBP13.29□□□□□ -0.28
USF1-201ENST00000368019 L2HGDHQ9H9P8 463 aa13.29□□□□□ -0.28
USF1-201ENST00000368019 RTEL1Q9NZ71 1219 aa13.29□□□□□ -0.28
USF1-201ENST00000368019 NRBP1Q9UHY1 535 aa13.29□□□□□ -0.28
USF1-201ENST00000368019 MROH5Q6ZUA9 1318 aa13.29□□□□□ -0.28
USF1-201ENST00000368019 CCDC69A6NI79 296 aa13.28□□□□□ -0.28
USF1-201ENST00000368019 JAK2O60674 1132 aa13.28□□□□□ -0.28
USF1-201ENST00000368019 SLU7O95391 586 aaKnown RBP13.28□□□□□ -0.28
USF1-201ENST00000368019 CYP21A2P08686 494 aa13.28□□□□□ -0.28
USF1-201ENST00000368019 SKILP12757 684 aa13.28□□□□□ -0.28
USF1-201ENST00000368019 TPM4P67936 248 aa13.28□□□□□ -0.28
USF1-201ENST00000368019 SNW1Q13573 536 aaKnown RBP13.28□□□□□ -0.28
USF1-201ENST00000368019 TNFAIP1Q13829 316 aa13.28□□□□□ -0.28
USF1-201ENST00000368019 PRPF38BQ5VTL8 546 aaKnown RBP13.28□□□□□ -0.28
USF1-201ENST00000368019 ADALQ6DHV7 355 aa13.28□□□□□ -0.28
USF1-201ENST00000368019 C11orf57Q6ZUT1 292 aaPredicted RBP13.28□□□□□ -0.28
USF1-201ENST00000368019 OTOP1Q7RTM1 612 aa13.28□□□□□ -0.28
USF1-201ENST00000368019 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
USF1-201ENST00000368019 DHX40Q8IX18 779 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms