RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TLE2Q04725 743 aa18.23■□□□□ 0.51
VAMP4-202ENST00000367740 GRB14Q14449 540 aa18.23■□□□□ 0.51
VAMP4-202ENST00000367740 CCDC102BQ68D86 513 aa18.23■□□□□ 0.51
VAMP4-202ENST00000367740 RABGAP1Q9Y3P9 1069 aa18.23■□□□□ 0.51
VAMP4-202ENST00000367740 PIEZO1Q92508 2521 aa18.22■□□□□ 0.51
VAMP4-202ENST00000367740 ADCYAP1R1P41586 468 aa18.22■□□□□ 0.51
VAMP4-202ENST00000367740 WDR78Q5VTH9 848 aa18.22■□□□□ 0.51
VAMP4-202ENST00000367740 FERMT2Q96AC1 680 aa18.22■□□□□ 0.51
VAMP4-202ENST00000367740 NECAB3Q96P71 396 aaPredicted RBP18.22■□□□□ 0.51
VAMP4-202ENST00000367740 SIL1Q9H173 461 aa18.22■□□□□ 0.51
VAMP4-202ENST00000367740 DNAJC18Q9H819 358 aa18.22■□□□□ 0.51
VAMP4-202ENST00000367740 EMILIN3Q9NT22 766 aa18.22■□□□□ 0.51
VAMP4-202ENST00000367740 GBF1Q92538 1859 aa18.21■□□□□ 0.51
VAMP4-202ENST00000367740 CLTBP09497 229 aa18.21■□□□□ 0.51
VAMP4-202ENST00000367740 CCNA1P78396 465 aa18.21■□□□□ 0.51
VAMP4-202ENST00000367740 SPTY2D1Q68D10 685 aaPredicted RBP18.21■□□□□ 0.51
VAMP4-202ENST00000367740 PRDM12Q9H4Q4 367 aa18.21■□□□□ 0.51
VAMP4-202ENST00000367740 TACC3Q9Y6A5 838 aa18.21■□□□□ 0.51
VAMP4-202ENST00000367740 KIAA0355O15063 1070 aa18.2■□□□□ 0.5
VAMP4-202ENST00000367740 CIAO1O76071 339 aa18.2■□□□□ 0.5
VAMP4-202ENST00000367740 MAP4K4O95819 1239 aaPredicted RBP18.2■□□□□ 0.5
VAMP4-202ENST00000367740 MYCNP04198 464 aaPredicted RBP18.2■□□□□ 0.5
VAMP4-202ENST00000367740 FPGSQ05932 587 aa18.2■□□□□ 0.5
VAMP4-202ENST00000367740 ADGRE1Q14246 886 aa18.2■□□□□ 0.5
VAMP4-202ENST00000367740 LRRC41Q15345 812 aa18.2■□□□□ 0.5
VAMP4-202ENST00000367740 IL27Q8NEV9 243 aa18.2■□□□□ 0.5
VAMP4-202ENST00000367740 USP44Q9H0E7 712 aa18.2■□□□□ 0.5
VAMP4-202ENST00000367740 CEP126Q9P2H0 1117 aa18.2■□□□□ 0.5
VAMP4-202ENST00000367740 HCN4Q9Y3Q4 1203 aa18.2■□□□□ 0.5
VAMP4-202ENST00000367740 TRANK1O15050 2925 aa18.19■□□□□ 0.5
VAMP4-202ENST00000367740 SEPT4O43236 478 aa18.19■□□□□ 0.5
VAMP4-202ENST00000367740 GDF11O95390 407 aa18.19■□□□□ 0.5
VAMP4-202ENST00000367740 CCDC85BQ15834 202 aaPredicted RBP18.19■□□□□ 0.5
VAMP4-202ENST00000367740 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
VAMP4-202ENST00000367740 PI4KBQ9UBF8 816 aa18.19■□□□□ 0.5
VAMP4-202ENST00000367740 ZBTB21Q9ULJ3 1066 aa18.19■□□□□ 0.5
VAMP4-202ENST00000367740 IVNS1ABPQ9Y6Y0 642 aa18.19■□□□□ 0.5
VAMP4-202ENST00000367740 A0A0G2JMZ2 1700 aa18.18■□□□□ 0.5
VAMP4-202ENST00000367740 RAG1P15918 1043 aa18.18■□□□□ 0.5
VAMP4-202ENST00000367740 PBX2P40425 430 aa18.18■□□□□ 0.5
VAMP4-202ENST00000367740 FAM47AQ5JRC9 791 aa18.18■□□□□ 0.5
VAMP4-202ENST00000367740 OLFML2BQ68BL8 750 aa18.18■□□□□ 0.5
VAMP4-202ENST00000367740 USP17L2Q6R6M4 530 aa18.18■□□□□ 0.5
VAMP4-202ENST00000367740 PBX4Q9BYU1 374 aa18.18■□□□□ 0.5
VAMP4-202ENST00000367740 BTBD7Q9P203 1132 aa18.18■□□□□ 0.5
VAMP4-202ENST00000367740 FBXO3Q9UK99 471 aa18.18■□□□□ 0.5
VAMP4-202ENST00000367740 WDR63Q8IWG1 891 aa18.17■□□□□ 0.5
VAMP4-202ENST00000367740 TEX11Q8IYF3 940 aa18.17■□□□□ 0.5
VAMP4-202ENST00000367740 SP7Q8TDD2 431 aaPredicted RBP18.17■□□□□ 0.5
VAMP4-202ENST00000367740 NSUN4Q96CB9 384 aaKnown RBP18.17■□□□□ 0.5
VAMP4-202ENST00000367740 C12orf42Q96LP6 360 aa18.17■□□□□ 0.5
VAMP4-202ENST00000367740 LRFN3Q9BTN0 628 aa18.17■□□□□ 0.5
VAMP4-202ENST00000367740 PHF24Q9UPV7 400 aa18.17■□□□□ 0.5
VAMP4-202ENST00000367740 SMCHD1A6NHR9 2005 aa18.16■□□□□ 0.5
VAMP4-202ENST00000367740 LBX2Q6XYB7 198 aa18.16■□□□□ 0.5
VAMP4-202ENST00000367740 METTL16Q86W50 562 aaKnown RBP18.16■□□□□ 0.5
VAMP4-202ENST00000367740 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.16■□□□□ 0.5
VAMP4-202ENST00000367740 GINM1Q9NU53 330 aa18.16■□□□□ 0.5
VAMP4-202ENST00000367740 MUC6Q6W4X9 2439 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 GRXCR1A8MXD5 290 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 USP17L15C9J2P7 530 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 USP17L13C9JLJ4 530 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 USP17L11C9JVI0 530 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 USP17L18D6R9N7 530 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 USP17L22D6RA61 530 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 USP17L17D6RBQ6 530 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 USP17L19D6RCP7 530 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 USP17L20D6RJB6 530 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 PQBP1O60828 265 aaKnown RBP18.15■□□□□ 0.5
VAMP4-202ENST00000367740 BMP1P13497 986 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 ADORA2AP29274 412 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 GSTO1P78417 241 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 USP17L24Q0WX57 530 aa18.15■□□□□ 0.5
VAMP4-202ENST00000367740 ZYXQ15942 572 aaKnown RBP18.15■□□□□ 0.5
VAMP4-202ENST00000367740 SH3RF3Q8TEJ3 882 aaPredicted RBP18.15■□□□□ 0.5
VAMP4-202ENST00000367740 DHX36Q9H2U1 1008 aaKnown RBP18.15■□□□□ 0.5
VAMP4-202ENST00000367740 CXXC1Q9P0U4 656 aaPredicted RBP18.15■□□□□ 0.5
VAMP4-202ENST00000367740 LDHCP07864 332 aa18.14■□□□□ 0.49
VAMP4-202ENST00000367740 IL15P40933 162 aaPredicted RBP18.14■□□□□ 0.49
VAMP4-202ENST00000367740 CATSPERGQ6ZRH7 1159 aa18.14■□□□□ 0.49
VAMP4-202ENST00000367740 DPP9Q86TI2 863 aa18.14■□□□□ 0.49
VAMP4-202ENST00000367740 TMEM39AQ9NV64 488 aa18.14■□□□□ 0.49
VAMP4-202ENST00000367740 SPDYE16A6NNV3 312 aaPredicted RBP18.13■□□□□ 0.49
VAMP4-202ENST00000367740 VCAM1P19320 739 aa18.13■□□□□ 0.49
VAMP4-202ENST00000367740 IGFBP4P22692 258 aa18.13■□□□□ 0.49
VAMP4-202ENST00000367740 FAAP100Q0VG06 881 aa18.13■□□□□ 0.49
VAMP4-202ENST00000367740 CCDC184Q52MB2 194 aa18.13■□□□□ 0.49
VAMP4-202ENST00000367740 PRAMEF19Q5SWL8 479 aa18.13■□□□□ 0.49
VAMP4-202ENST00000367740 RASIP1Q5U651 963 aa18.13■□□□□ 0.49
VAMP4-202ENST00000367740 PI16Q6UXB8 463 aa18.13■□□□□ 0.49
VAMP4-202ENST00000367740 CCDC129Q6ZRS4 1044 aa18.13■□□□□ 0.49
VAMP4-202ENST00000367740 EPHX3Q9H6B9 360 aa18.13■□□□□ 0.49
VAMP4-202ENST00000367740 SALL2Q9Y467 1007 aaPredicted RBP18.13■□□□□ 0.49
VAMP4-202ENST00000367740 LRRC37A2A6NM11 1700 aa18.12■□□□□ 0.49
VAMP4-202ENST00000367740 A0A1W2PQ45 241 aaPredicted RBP18.12■□□□□ 0.49
VAMP4-202ENST00000367740 A0A1W2PQY0 241 aa18.12■□□□□ 0.49
VAMP4-202ENST00000367740 TIMM10P62072 90 aa18.12■□□□□ 0.49
VAMP4-202ENST00000367740 TFF2Q03403 129 aa18.12■□□□□ 0.49
VAMP4-202ENST00000367740 TBC1D9Q6ZT07 1266 aa18.12■□□□□ 0.49
VAMP4-202ENST00000367740 CRACR2BQ8N4Y2 399 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms