RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 SLC44A5Q8NCS7 719 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 ESR2Q92731 530 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 GTF3C6Q969F1 213 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 ADAM33Q9BZ11 813 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 OSBPL5Q9H0X9 879 aaPredicted RBP11.17□□□□□ -0.62
VTA1-201ENST00000367621 TDRD3Q9H7E2 651 aaKnown RBP11.17□□□□□ -0.62
VTA1-201ENST00000367621 CHMP5Q9NZZ3 219 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 ANGEL1Q9UNK9 670 aaKnown RBP11.17□□□□□ -0.62
VTA1-201ENST00000367621 ZDHHC9Q9Y397 364 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 ADAMTSL1Q8N6G6 1762 aa11.16□□□□□ -0.62
VTA1-201ENST00000367621 RASA1P20936 1047 aa11.16□□□□□ -0.62
VTA1-201ENST00000367621 CDK8P49336 464 aa11.16□□□□□ -0.62
VTA1-201ENST00000367621 RBM5P52756 815 aaKnown RBP eCLIP11.16□□□□□ -0.62
VTA1-201ENST00000367621 STK3Q13188 491 aa11.16□□□□□ -0.62
VTA1-201ENST00000367621 PKP1Q13835 747 aa11.16□□□□□ -0.62
VTA1-201ENST00000367621 TNIP1Q15025 636 aa11.16□□□□□ -0.62
VTA1-201ENST00000367621 ZKSCAN3Q9BRR0 538 aa11.16□□□□□ -0.62
VTA1-201ENST00000367621 FAM217BQ9NTX9 383 aaPredicted RBP11.16□□□□□ -0.62
VTA1-201ENST00000367621 LAMA4Q16363 1823 aa11.16□□□□□ -0.62
VTA1-201ENST00000367621 DDX60LQ5H9U9 1706 aaKnown RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 KLF18A0A0U1RQI7 1052 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 DDTLA6NHG4 134 aaPredicted RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 IFIT3O14879 490 aaKnown RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 RANBP6O60518 1105 aaKnown RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 NMT2O60551 498 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 EGFRP00533 1210 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 HSP90AA1P07900 732 aaKnown RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 SLC3A2P08195 630 aaKnown RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 SLURP2P0DP57 97 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 LMNB1P20700 586 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 RPS12P25398 132 aaKnown RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 GMPSP49915 693 aaPredicted RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 FGD1P98174 961 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 PDE4BQ07343 736 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 TMEM67Q5HYA8 995 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 FAM47AQ5JRC9 791 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 RCSD1Q6JBY9 416 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 METTL16Q86W50 562 aaKnown RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 ENAHQ8N8S7 591 aaPredicted RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 SMARCC2Q8TAQ2 1214 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 DPF2Q92785 391 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 ZSCAN10Q96SZ4 725 aaPredicted RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.15□□□□□ -0.62
VTA1-201ENST00000367621 IRX2Q9BZI1 471 aaPredicted RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 NCOA5Q9HCD5 579 aaKnown RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 IL17RBQ9NRM6 502 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 TOMM22Q9NS69 142 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 ZNF70Q9UC06 446 aaPredicted RBP11.15□□□□□ -0.62
VTA1-201ENST00000367621 PGAP2Q9UHJ9 254 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 HDAC9Q9UKV0 1011 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 MYH2Q9UKX2 1941 aa11.15□□□□□ -0.62
VTA1-201ENST00000367621 CCDC88AQ3V6T2 1871 aa11.15□□□□□ -0.63
VTA1-201ENST00000367621 JAK2O60674 1132 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 ENTPD3O75355 529 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 SHMT1P34896 483 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 NT5C2P49902 561 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 MMP14P50281 582 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 CCT2P78371 535 aaKnown RBP11.14□□□□□ -0.63
VTA1-201ENST00000367621 RAB3GAP1Q15042 981 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 DLGAP5Q15398 846 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 APOA5Q6Q788 366 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 RAB11FIP4Q86YS3 637 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 NSUN7Q8NE18 718 aaKnown RBP11.14□□□□□ -0.63
VTA1-201ENST00000367621 ANKS1AQ92625 1134 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 EHD4Q9H223 541 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 DNAJC18Q9H819 358 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 TCP11L1Q9NUJ3 509 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.14□□□□□ -0.63
VTA1-201ENST00000367621 CNTNAP1P78357 1384 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 ARFGEF1Q9Y6D6 1849 aa11.14□□□□□ -0.63
VTA1-201ENST00000367621 TNKSO95271 1327 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 GOLGA8BA8MQT2 603 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 WNT10BO00744 389 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 BRD1O95696 1058 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 GJB2P29033 226 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 CDC27P30260 824 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 NOVP48745 357 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 EIF6P56537 245 aaKnown RBP11.13□□□□□ -0.63
VTA1-201ENST00000367621 TFAP4Q01664 338 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 WTAPQ15007 396 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 NBPF9Q3BBW0 867 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 FKBP1CQ5VVH2 108 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 TTC6Q86TZ1 520 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 AMOTL1Q8IY63 956 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 OGFOD1Q8N543 542 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 LLPHQ9BRT6 129 aaKnown RBP11.13□□□□□ -0.63
VTA1-201ENST00000367621 MYOZ2Q9NPC6 264 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 SMC3Q9UQE7 1217 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 PSME4Q14997 1843 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 NID2Q14112 1375 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 ATRNL1Q5VV63 1379 aa11.13□□□□□ -0.63
VTA1-201ENST00000367621 IGKV6D-41A0A0C4DH26 115 aa11.12□□□□□ -0.63
VTA1-201ENST00000367621 CLRN2A0PK11 232 aa11.12□□□□□ -0.63
VTA1-201ENST00000367621 FDPSP14324 419 aaKnown RBP11.12□□□□□ -0.63
VTA1-201ENST00000367621 ADD1P35611 737 aaKnown RBP11.12□□□□□ -0.63
VTA1-201ENST00000367621 TCP10Q12799 353 aa11.12□□□□□ -0.63
VTA1-201ENST00000367621 NTRK3Q16288 839 aa11.12□□□□□ -0.63
VTA1-201ENST00000367621 TMTC2Q8N394 836 aa11.12□□□□□ -0.63
VTA1-201ENST00000367621 NEDD1Q8NHV4 660 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms