RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 SRGAP3O43295 1099 aa12.11□□□□□ -0.47
NUP43-203ENST00000367404 CAP2P40123 477 aa12.11□□□□□ -0.47
NUP43-203ENST00000367404 HMGCS2P54868 508 aa12.11□□□□□ -0.47
NUP43-203ENST00000367404 GSTO1P78417 241 aa12.11□□□□□ -0.47
NUP43-203ENST00000367404 SPP2Q13103 211 aa12.11□□□□□ -0.47
NUP43-203ENST00000367404 PABPC4Q13310 644 aaKnown RBP eCLIP12.11□□□□□ -0.47
NUP43-203ENST00000367404 PI16Q6UXB8 463 aa12.11□□□□□ -0.47
NUP43-203ENST00000367404 NECAB2Q7Z6G3 386 aa12.11□□□□□ -0.47
NUP43-203ENST00000367404 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
NUP43-203ENST00000367404 GDF15Q99988 308 aa12.11□□□□□ -0.47
NUP43-203ENST00000367404 ASCC2Q9H1I8 757 aaPredicted RBP12.11□□□□□ -0.47
NUP43-203ENST00000367404 WDR70Q9NW82 654 aa12.11□□□□□ -0.47
NUP43-203ENST00000367404 HERC5Q9UII4 1024 aaKnown RBP12.11□□□□□ -0.47
NUP43-203ENST00000367404 USP17L5A8MUK1 530 aa12.1□□□□□ -0.47
NUP43-203ENST00000367404 LDHCP07864 332 aa12.1□□□□□ -0.47
NUP43-203ENST00000367404 GNAI3P08754 354 aa12.1□□□□□ -0.47
NUP43-203ENST00000367404 BMP8BP34820 402 aa12.1□□□□□ -0.47
NUP43-203ENST00000367404 MAP3K21Q5TCX8 1036 aa12.1□□□□□ -0.47
NUP43-203ENST00000367404 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
NUP43-203ENST00000367404 WDR18Q9BV38 432 aa12.1□□□□□ -0.47
NUP43-203ENST00000367404 STAP2Q9UGK3 403 aa12.1□□□□□ -0.47
NUP43-203ENST00000367404 ARIH1Q9Y4X5 557 aaPredicted RBP12.1□□□□□ -0.47
NUP43-203ENST00000367404 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
NUP43-203ENST00000367404 MCAMP43121 646 aa12.09□□□□□ -0.47
NUP43-203ENST00000367404 RARSP54136 660 aaKnown RBP12.09□□□□□ -0.47
NUP43-203ENST00000367404 TRIM32Q13049 653 aa12.09□□□□□ -0.47
NUP43-203ENST00000367404 PROX2Q3B8N5 592 aa12.09□□□□□ -0.47
NUP43-203ENST00000367404 C6orf132Q5T0Z8 1188 aa12.09□□□□□ -0.47
NUP43-203ENST00000367404 TBC1D9Q6ZT07 1266 aa12.09□□□□□ -0.47
NUP43-203ENST00000367404 METTL16Q86W50 562 aaKnown RBP12.09□□□□□ -0.47
NUP43-203ENST00000367404 TRIB2Q92519 343 aa12.09□□□□□ -0.47
NUP43-203ENST00000367404 LRCH3Q96II8 777 aa12.09□□□□□ -0.47
NUP43-203ENST00000367404 AS3MTQ9HBK9 375 aa12.09□□□□□ -0.47
NUP43-203ENST00000367404 OGDHLQ9ULD0 1010 aa12.09□□□□□ -0.47
NUP43-203ENST00000367404 AK9Q5TCS8 1911 aa12.09□□□□□ -0.47
NUP43-203ENST00000367404 SPDYE16A6NNV3 312 aaPredicted RBP12.08□□□□□ -0.48
NUP43-203ENST00000367404 HOXA7P31268 230 aaPredicted RBP12.08□□□□□ -0.48
NUP43-203ENST00000367404 TEX11Q8IYF3 940 aa12.08□□□□□ -0.48
NUP43-203ENST00000367404 SH3RF3Q8TEJ3 882 aaPredicted RBP12.08□□□□□ -0.48
NUP43-203ENST00000367404 NBPF3Q9H094 633 aa12.08□□□□□ -0.48
NUP43-203ENST00000367404 DHX36Q9H2U1 1008 aaKnown RBP12.08□□□□□ -0.48
NUP43-203ENST00000367404 DNAJC18Q9H819 358 aa12.08□□□□□ -0.48
NUP43-203ENST00000367404 HMX1Q9NP08 348 aaPredicted RBP12.08□□□□□ -0.48
NUP43-203ENST00000367404 PI4KBQ9UBF8 816 aa12.08□□□□□ -0.48
NUP43-203ENST00000367404 SIPA1L1O43166 1804 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 A0A0C4DFX4 3053 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 ASNSP08243 561 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 XRCC5P13010 732 aaKnown RBP12.07□□□□□ -0.48
NUP43-203ENST00000367404 BACE1P56817 501 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 JAG1P78504 1218 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 MTMR2Q13614 643 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 C7orf61Q8IZ16 206 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 SOCS4Q8WXH5 440 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 NEUROD6Q96NK8 337 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 GINM1Q9NU53 330 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 RAI14Q9P0K7 980 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 ALPK3Q96L96 1907 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 MAST2Q6P0Q8 1798 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 PFASO15067 1338 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 FLT1P17948 1338 aa12.07□□□□□ -0.48
NUP43-203ENST00000367404 IGSF3O75054 1194 aa12.06□□□□□ -0.48
NUP43-203ENST00000367404 UQCRFS1P1P0C7P4 283 aa12.06□□□□□ -0.48
NUP43-203ENST00000367404 PPP4CP60510 307 aa12.06□□□□□ -0.48
NUP43-203ENST00000367404 HERVK_113P62684 666 aa12.06□□□□□ -0.48
NUP43-203ENST00000367404 IRX3P78415 501 aaPredicted RBP12.06□□□□□ -0.48
NUP43-203ENST00000367404 LRIT3Q3SXY7 679 aa12.06□□□□□ -0.48
NUP43-203ENST00000367404 USP6NLQ92738 828 aa12.06□□□□□ -0.48
NUP43-203ENST00000367404 C11orf49Q9H6J7 331 aa12.06□□□□□ -0.48
NUP43-203ENST00000367404 TXNRD2Q9NNW7 524 aa12.06□□□□□ -0.48
NUP43-203ENST00000367404 ZMYND8Q9ULU4 1186 aaPredicted RBP12.06□□□□□ -0.48
NUP43-203ENST00000367404 PLXNB2O15031 1838 aa12.06□□□□□ -0.48
NUP43-203ENST00000367404 PNMA6EA0A0J9YXQ4 647 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 C19orf81C9J6K1 198 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 GNAI2P04899 355 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 COL6A1P12109 1028 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 SHROOM1Q2M3G4 852 aaPredicted RBP12.05□□□□□ -0.48
NUP43-203ENST00000367404 GORABQ5T7V8 394 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 ADGRA1Q86SQ6 560 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 SLC17A8Q8NDX2 589 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 GPRC5AQ8NFJ5 357 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 P2RX7Q99572 595 aaKnown RBP12.05□□□□□ -0.48
NUP43-203ENST00000367404 NUDT12Q9BQG2 462 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 GPR108Q9NPR9 543 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 TSHZ2Q9NRE2 1034 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 AATFQ9NY61 560 aaKnown RBP eCLIP12.05□□□□□ -0.48
NUP43-203ENST00000367404 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 LRP2BPQ9P2M1 347 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 RABGEF1Q9UJ41 708 aa12.05□□□□□ -0.48
NUP43-203ENST00000367404 DDX60LQ5H9U9 1706 aaKnown RBP12.05□□□□□ -0.48
NUP43-203ENST00000367404 ATAD5Q96QE3 1844 aa12.04□□□□□ -0.48
NUP43-203ENST00000367404 PEX10O60683 326 aa12.04□□□□□ -0.48
NUP43-203ENST00000367404 BAG3O95817 575 aa12.04□□□□□ -0.48
NUP43-203ENST00000367404 TRIM27P14373 513 aa12.04□□□□□ -0.48
NUP43-203ENST00000367404 CYP2B6P20813 491 aa12.04□□□□□ -0.48
NUP43-203ENST00000367404 MAPK4P31152 587 aa12.04□□□□□ -0.48
NUP43-203ENST00000367404 MAGEA10P43363 369 aaPredicted RBP12.04□□□□□ -0.48
NUP43-203ENST00000367404 NBR1Q14596 966 aa12.04□□□□□ -0.48
NUP43-203ENST00000367404 NAA16Q6N069 864 aaPredicted RBP12.04□□□□□ -0.48
NUP43-203ENST00000367404 FOXP4Q8IVH2 680 aaPredicted RBP12.04□□□□□ -0.48
NUP43-203ENST00000367404 TRMT44Q8IYL2 757 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms