RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 OSBP2Q969R2 916 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 CCDC17Q96LX7 622 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 MKNK2Q9HBH9 465 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 CWC22Q9HCG8 908 aaKnown RBP11.13□□□□□ -0.63
MRPL55-216ENST00000366744 COL11A1P12107 1806 aaPredicted RBP11.13□□□□□ -0.63
MRPL55-216ENST00000366744 HTTP42858 3142 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 ADGRA2Q96PE1 1338 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 KIAA0100Q14667 2235 aaKnown RBP11.12□□□□□ -0.63
MRPL55-216ENST00000366744 HIP1O00291 1037 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 TNPO2O14787 897 aaKnown RBP11.12□□□□□ -0.63
MRPL55-216ENST00000366744 IGHDP01880 384 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 CHGBP05060 677 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 NEFLP07196 543 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 PSMC4P43686 418 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 ICA1Q05084 483 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 GABPAQ06546 454 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 SEPT2Q15019 361 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 FAM110CQ1W6H9 321 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 SLC9C1Q4G0N8 1177 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 ZMYM1Q5SVZ6 1142 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 CTR9Q6PD62 1173 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 C17orf99Q6UX52 265 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 NBPF11Q86T75 865 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 SLC44A5Q8NCS7 719 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 HELLSQ9NRZ9 838 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 DIAPH3Q9NSV4 1193 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 PTPN22Q9Y2R2 807 aa11.12□□□□□ -0.63
MRPL55-216ENST00000366744 MYPNQ86TC9 1320 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 CYP2D7A0A087X1C5 515 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 GSG1L2A8MUP6 293 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 ECM2O94769 699 aaPredicted RBP11.11□□□□□ -0.63
MRPL55-216ENST00000366744 CDK8P49336 464 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 ATP2B2Q01814 1243 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 PDE4BQ07343 736 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 SHROOM1Q2M3G4 852 aaPredicted RBP11.11□□□□□ -0.63
MRPL55-216ENST00000366744 SBK1Q52WX2 424 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 ANKRD13CQ8N6S4 541 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 RAET1EQ8TD07 263 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 DYNLL2Q96FJ2 89 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 TANGO6Q9C0B7 1094 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 KIAA1683Q9H0B3 1180 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 ASCC2Q9H1I8 757 aaPredicted RBP11.11□□□□□ -0.63
MRPL55-216ENST00000366744 CENPFP49454 3210 aa11.11□□□□□ -0.63
MRPL55-216ENST00000366744 USP17L15C9J2P7 530 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 PATL2C9JE40 543 aaKnown RBP11.1□□□□□ -0.63
MRPL55-216ENST00000366744 USP17L13C9JLJ4 530 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 USP17L11C9JVI0 530 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 USP17L18D6R9N7 530 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 USP17L22D6RA61 530 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 USP17L17D6RBQ6 530 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 USP17L19D6RCP7 530 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 USP17L20D6RJB6 530 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 RAD21O60216 631 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 BCRP11274 1271 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 AKR1B1P15121 316 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 VCAM1P19320 739 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 USP17L24Q0WX57 530 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 IFNL3Q8IZI9 196 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 LPAR1Q92633 364 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 COA7Q96BR5 231 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 C12orf42Q96LP6 360 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 OSBPL3Q9H4L5 887 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 KANSL2Q9H9L4 492 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 EPB41L4AQ9HCS5 686 aaPredicted RBP11.1□□□□□ -0.63
MRPL55-216ENST00000366744 GOPCQ9HD26 462 aa11.1□□□□□ -0.63
MRPL55-216ENST00000366744 PDE4DIPQ5VU43 2346 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 HOXA7P31268 230 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-216ENST00000366744 SOX10P56693 466 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 HERVK_113P62684 666 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 CCNA1P78396 465 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 JAG1P78504 1218 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 EVX2Q03828 476 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 MCMDC2Q4G0Z9 681 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 PPP4R3BQ5MIZ7 849 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 PLEKHM2Q8IWE5 1019 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 ZNF444Q8N0Y2 327 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-216ENST00000366744 STK11IPQ8N1F8 1099 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 TRIM47Q96LD4 638 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 SEC62Q99442 399 aaKnown RBP11.09□□□□□ -0.63
MRPL55-216ENST00000366744 PAGR1Q9BTK6 254 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 ARHGAP39Q9C0H5 1083 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 SRRDQ9UH36 339 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 PTCH2Q9Y6C5 1203 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 CCDC171Q6TFL3 1326 aa11.09□□□□□ -0.63
MRPL55-216ENST00000366744 RLFQ13129 1914 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 ZNF236Q9UL36 1845 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 A0A0D9SFI3 127 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 TSPY3P0CV98 308 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 TSPY8P0CW00 308 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 PPARAQ07869 468 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 NMIQ13287 307 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-216ENST00000366744 CCDC129Q6ZRS4 1044 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 GPRC5AQ8NFJ5 357 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 ACER1Q8TDN7 264 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 TMEM106CQ9BVX2 250 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 RPAP3Q9H6T3 665 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-216ENST00000366744 TOMM22Q9NS69 142 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 EMILIN3Q9NT22 766 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 BIN2Q9UBW5 565 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-216ENST00000366744 PLXNA1Q9UIW2 1896 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms