RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 UBXN2AP68543 259 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 SEPT2Q15019 361 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 RAB3GAP1Q15042 981 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 Q3C1V9 767 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 C12orf60Q5U649 245 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 ZSCAN25Q6NSZ9 544 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 UBE2Q1Q7Z7E8 422 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 KBTBD3Q8NAB2 608 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 CABP5Q9NP86 173 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 SWAP70Q9UH65 585 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 BAZ2AQ9UIF9 1905 aaKnown RBP16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 A0A1W2PRG0 241 aa16.48■□□□□ 0.23
TNFRSF1A-202ENST00000366159 CATSPERGQ6ZRH7 1159 aa16.48■□□□□ 0.23
TNFRSF1A-202ENST00000366159 SIAH1Q8IUQ4 282 aa16.48■□□□□ 0.23
TNFRSF1A-202ENST00000366159 SLC44A5Q8NCS7 719 aa16.48■□□□□ 0.23
TNFRSF1A-202ENST00000366159 GPRC5AQ8NFJ5 357 aa16.48■□□□□ 0.23
TNFRSF1A-202ENST00000366159 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
TNFRSF1A-202ENST00000366159 GTF3C2Q8WUA4 911 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-202ENST00000366159 DYNLL2Q96FJ2 89 aa16.48■□□□□ 0.23
TNFRSF1A-202ENST00000366159 RNF208Q9H0X6 261 aa16.48■□□□□ 0.23
TNFRSF1A-202ENST00000366159 UNC93B1Q9H1C4 597 aa16.48■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP17L15C9J2P7 530 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP17L13C9JLJ4 530 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP17L11C9JVI0 530 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP17L18D6R9N7 530 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP17L22D6RA61 530 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP17L17D6RBQ6 530 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP17L19D6RCP7 530 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP17L20D6RJB6 530 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 CNMDO75829 334 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 INHAP05111 366 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 VCAM1P19320 739 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP17L24Q0WX57 530 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 TSHZ3Q63HK5 1081 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 LBX2Q6XYB7 198 aa16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 STRBPQ96SI9 672 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1A-202ENST00000366159 CYP2D7A0A087X1C5 515 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP17L12C9JPN9 530 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP17L21D6R901 530 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 ERVK-9P63128 1117 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 ERVK-24P63145 666 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 ZYXQ15942 572 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 CTR9Q6PD62 1173 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 TMEM179Q6ZVK1 233 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 PI4K2BQ8TCG2 481 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP6NLQ92738 828 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 OSBP2Q969R2 916 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 PAK6Q9NQU5 681 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 BIN2Q9UBW5 565 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 SLC4A4Q9Y6R1 1079 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 TTC41PQ6P2S7 1318 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 SALL3Q9BXA9 1300 aa16.46■□□□□ 0.23
TNFRSF1A-202ENST00000366159 GSG1L2A8MUP6 293 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 SGPL1O95470 568 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 CDK8P49336 464 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 C16orf86Q6ZW13 317 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 OTUD7AQ8TE49 926 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 U2AF1L4Q8WU68 220 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 GPATCH3Q96I76 525 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 CRBNQ96SW2 442 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 FEZ1Q99689 392 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 PORCNQ9H237 461 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 RABGAP1Q9Y3P9 1069 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 RLFQ13129 1914 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 RNF113AO15541 343 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 SLC34A2O95436 690 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 XRCC5P13010 732 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 AKR1B1P15121 316 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 CAPN2P17655 700 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 MAPK4P31152 587 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 SBK1Q52WX2 424 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 KIAA1755Q5JYT7 1200 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 GIMAP6Q6P9H5 292 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 APPBP2Q92624 585 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 CCDC17Q96LX7 622 aa16.45■□□□□ 0.22
TNFRSF1A-202ENST00000366159 MYH8P13535 1937 aa16.44■□□□□ 0.22
TNFRSF1A-202ENST00000366159 MPHOSPH10O00566 681 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-202ENST00000366159 HMGCRP04035 888 aa16.44■□□□□ 0.22
TNFRSF1A-202ENST00000366159 ZFYP08048 801 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-202ENST00000366159 MORN1Q5T089 497 aa16.44■□□□□ 0.22
TNFRSF1A-202ENST00000366159 TRIB2Q92519 343 aa16.44■□□□□ 0.22
TNFRSF1A-202ENST00000366159 CRISPLD2Q9H0B8 497 aa16.44■□□□□ 0.22
TNFRSF1A-202ENST00000366159 RPAP3Q9H6T3 665 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-202ENST00000366159 BTBD7Q9P203 1132 aa16.44■□□□□ 0.22
TNFRSF1A-202ENST00000366159 TMX2Q9Y320 296 aa16.44■□□□□ 0.22
TNFRSF1A-202ENST00000366159 SPDYE16A6NNV3 312 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-202ENST00000366159 TRIM32Q13049 653 aa16.43■□□□□ 0.22
TNFRSF1A-202ENST00000366159 HDAC1Q13547 482 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-202ENST00000366159 MAP3K21Q5TCX8 1036 aa16.43■□□□□ 0.22
TNFRSF1A-202ENST00000366159 GPR142Q7Z601 462 aa16.43■□□□□ 0.22
TNFRSF1A-202ENST00000366159 SOCS4Q8WXH5 440 aa16.43■□□□□ 0.22
TNFRSF1A-202ENST00000366159 NUDT12Q9BQG2 462 aa16.43■□□□□ 0.22
TNFRSF1A-202ENST00000366159 PAGR1Q9BTK6 254 aa16.43■□□□□ 0.22
TNFRSF1A-202ENST00000366159 ARPP21Q9UBL0 812 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-202ENST00000366159 GREB1LQ9C091 1923 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1A-202ENST00000366159 PLEKHH3Q7Z736 793 aa16.42■□□□□ 0.22
TNFRSF1A-202ENST00000366159 CLEC10AQ8IUN9 316 aa16.42■□□□□ 0.22
TNFRSF1A-202ENST00000366159 DDRGK1Q96HY6 314 aa16.42■□□□□ 0.22
TNFRSF1A-202ENST00000366159 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.42■□□□□ 0.22
TNFRSF1A-202ENST00000366159 EPB41L4AQ9HCS5 686 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms