RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 SRRTQ9BXP5 876 aaKnown RBP4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 GINM1Q9NU53 330 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 KCNH3Q9ULD8 1083 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 CEP131Q9UPN4 1083 aa4.27□□□□□ -1.73
RNU6-428P-201ENST00000362942 PRR19A6NJB7 356 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 RGS13O14921 159 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 LEFTY1O75610 366 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 TGFB1P01137 390 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 ATF4P18848 351 aaPredicted RBP4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 NASPP49321 788 aaPredicted RBP4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 IFI16Q16666 785 aaKnown RBP4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 ARSHQ5FYA8 562 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 ZMYM1Q5SVZ6 1142 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 INTS3Q68E01 1043 aaKnown RBP4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 OVOS1Q6IE37 1185 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 C22orf34Q6ZV56 151 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 UBE3DQ7Z6J8 389 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 STK11IPQ8N1F8 1099 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 TAB3Q8N5C8 712 aaPredicted RBP4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 NETO1Q8TDF5 533 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 DHRS1Q96LJ7 313 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 DPH2Q9BQC3 489 aaPredicted RBP4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 ASPNQ9BXN1 380 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 CNNM2Q9H8M5 875 aa4.26□□□□□ -1.73
RNU6-428P-201ENST00000362942 TMEM265A0A087WTH1 108 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 SCO2A0A1W2PP80 73 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 UPK3BL1B0FP48 263 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 FAM155AB1AL88 458 aaPredicted RBP4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 UPK3BL2E5RIL1 263 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 TNFRSF10CO14798 259 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 EOMESO95936 686 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 CEACAM5P06731 702 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 NME1P15531 152 aaKnown RBP4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 DNAJA1P31689 397 aaKnown RBP4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 NAALADL2Q58DX5 795 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 CDH24Q86UP0 819 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 MFSD4AQ8N468 514 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 PIWIL2Q8TC59 973 aaKnown RBP4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 RNF141Q8WVD5 230 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 ATG4CQ96DT6 458 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 KIF2CQ99661 725 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 TINF2Q9BSI4 451 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 ASCC2Q9H1I8 757 aaPredicted RBP4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 BSDC1Q9NW68 430 aaPredicted RBP4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 PPT2Q9UMR5 302 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 ANGEL1Q9UNK9 670 aaKnown RBP4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 R3HCC1Q9Y3T6 440 aaKnown RBP4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 SNX11Q9Y5W9 270 aa4.25□□□□□ -1.73
RNU6-428P-201ENST00000362942 CLEC3AO75596 197 aa4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 ZNF865P0CJ78 1059 aaPredicted RBP4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 GUCY2CP25092 1073 aa4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 RANGAP1P46060 587 aaPredicted RBP4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 GIPRP48546 466 aa4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 CLCN7P51798 805 aa4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 LRP8Q14114 963 aa4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 SF3A1Q15459 793 aaKnown RBP4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 BBS9Q3SYG4 887 aa4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 TNNI3KQ59H18 835 aa4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 C19orf47Q8N9M1 422 aaKnown RBP4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 SMARCC1Q92922 1105 aaPredicted RBP4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 HRASLS5Q96KN8 279 aa4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 TRIT1Q9H3H1 467 aaKnown RBP4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 PCMTD2Q9NV79 361 aa4.24□□□□□ -1.73
RNU6-428P-201ENST00000362942 CBX7O95931 251 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 ITIH2P19823 946 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 SSTR4P31391 388 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 CD97P48960 835 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 OXCT1P55809 520 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 CCDC81Q6ZN84 652 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 FAM214BQ7L5A3 538 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 VSIG10LQ86VR7 867 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 LSRQ86X29 649 aaPredicted RBP4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 SHISA5Q8N114 240 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 DNAJB8Q8NHS0 232 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 BAHD1Q8TBE0 780 aaPredicted RBP4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 ASB11Q8WXH4 323 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 FBXL18Q96ME1 805 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 HEXIM2Q96MH2 286 aaKnown RBP4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 KREMEN1Q96MU8 473 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 GMLQ99445 158 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 ZC3H7BQ9UGR2 993 aaKnown RBP4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 VAV3Q9UKW4 847 aa4.23□□□□□ -1.73
RNU6-428P-201ENST00000362942 KIAA1324LA8MWY0 1029 aaPredicted RBP4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 DNAJA2O60884 412 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 WNT11O96014 354 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 ITGB7P26010 798 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 PRKCQQ04759 706 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 MSMPQ1L6U9 139 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 THAP5Q7Z6K1 395 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 DTX1Q86Y01 620 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 FAM181AQ8N9Y4 354 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 AGBL5Q8NDL9 886 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 RIN3Q8TB24 985 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 PPP1R13LQ8WUF5 828 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 ANAPC16Q96DE5 110 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 PHAXQ9H814 394 aaKnown RBP4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 SLC5A6Q9Y289 635 aa4.22□□□□□ -1.73
RNU6-428P-201ENST00000362942 STK10O94804 968 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms