RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 LRFN2Q9ULH4 789 aa2.06□□□□□ -2.08
RNU6-228P-201ENST00000362700 TPX2Q9ULW0 747 aaKnown RBP2.06□□□□□ -2.08
RNU6-228P-201ENST00000362700 TESMINQ9Y4I5 508 aa2.06□□□□□ -2.08
RNU6-228P-201ENST00000362700 DMRT1Q9Y5R6 373 aa2.06□□□□□ -2.08
RNU6-228P-201ENST00000362700 USP17L5A8MUK1 530 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 ERVV-2B6SEH9 535 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 NARSO43776 548 aaKnown RBP2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 PFKLP17858 780 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 SOX11P35716 441 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 C21orf58P58505 322 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 R3HDM1Q15032 1099 aaKnown RBP2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 ZNF423Q2M1K9 1284 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 PDE12Q6L8Q7 609 aaKnown RBP2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 OGFOD1Q8N543 542 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 ANKS4BQ8N8V4 417 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 ZNF526Q8TF50 670 aaPredicted RBP2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 WDR89Q96FK6 387 aaPredicted RBP2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 DDRGK1Q96HY6 314 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 ZNF594Q96JF6 807 aaPredicted RBP2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 TMEM63CQ9P1W3 806 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 CNTN3Q9P232 1028 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 TACC3Q9Y6A5 838 aa2.05□□□□□ -2.08
RNU6-228P-201ENST00000362700 MSL3P1P0C860 447 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 LTKP29376 864 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 DAB2P98082 770 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 TMEM62Q0P6H9 643 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 DUSP4Q13115 394 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 PDE3BQ13370 1112 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 MPRIPQ6WCQ1 1025 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 NLRX1Q86UT6 975 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 LGI4Q8N135 537 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 BANK1Q8NDB2 785 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 Q96M66 194 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 PRM3Q9NNZ6 103 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 PMF1-BGLAPU3KQ54 211 aa2.04□□□□□ -2.08
RNU6-228P-201ENST00000362700 SDHBP21912 280 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 IGFBP6P24592 240 aaPredicted RBP2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 EGR3Q06889 387 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 AP3B2Q13367 1082 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 ZNF438Q7Z4V0 828 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 ETFBKMTQ8IXQ9 262 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 RNF214Q8ND24 703 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 PMEPA1Q969W9 287 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 ZNF503Q96F45 646 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 CRTAC1Q9NQ79 661 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 TBC1D2BQ9UPU7 963 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 INVSQ9Y283 1065 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 PCDHGC5Q9Y5F6 944 aa2.03□□□□□ -2.08
RNU6-228P-201ENST00000362700 CNTNAP2Q9UHC6 1331 aa2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 A0A1W2PP55 124 aa2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 KRTAP9-6A8MVA2 160 aa2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 FOXO3O43524 673 aa2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 CBX7O95931 251 aa2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 BRD2P25440 801 aaKnown RBP2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 CEBPAP49715 358 aaPredicted RBP2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 SEC13P55735 322 aa2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 FAM69CQ0P6D2 419 aa2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 IRF5Q13568 498 aa2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 KIF4BQ2VIQ3 1234 aa2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 LSM12Q3MHD2 195 aaKnown RBP2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 C9orf106Q8NAJ2 232 aa2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 CCDC86Q9H6F5 360 aaKnown RBP2.02□□□□□ -2.09
RNU6-228P-201ENST00000362700 RAMP2O60895 175 aa2.01□□□□□ -2.09
RNU6-228P-201ENST00000362700 PLA2G1BP04054 148 aaKnown RBP2.01□□□□□ -2.09
RNU6-228P-201ENST00000362700 MPOP05164 745 aa2.01□□□□□ -2.09
RNU6-228P-201ENST00000362700 BORAQ6PGQ7 559 aa2.01□□□□□ -2.09
RNU6-228P-201ENST00000362700 SYCE2Q6PIF2 218 aa2.01□□□□□ -2.09
RNU6-228P-201ENST00000362700 RNF207Q6ZRF8 634 aa2.01□□□□□ -2.09
RNU6-228P-201ENST00000362700 ZNF761Q86XN6 746 aaPredicted RBP2.01□□□□□ -2.09
RNU6-228P-201ENST00000362700 PCMTD1Q96MG8 357 aaPredicted RBP2.01□□□□□ -2.09
RNU6-228P-201ENST00000362700 METTL12A8MUP2 240 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 ZNF862O60290 1169 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 LGR5O75473 907 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 ADH4P08319 380 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 EDN3P14138 238 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 TPP2P29144 1249 aaPredicted RBP2□□□□□ -2.09
RNU6-228P-201ENST00000362700 PTH1RQ03431 593 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 KIAA2012Q0VF49 1180 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 KRTAP27-1Q3LI81 207 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 NRN1LQ496H8 165 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 DNERQ8NFT8 737 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 GPR152Q8TDT2 470 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 DUSP13Q9UII6 198 aa2□□□□□ -2.09
RNU6-228P-201ENST00000362700 NPEPPSL1A6NEC2 478 aa1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 DKK1O94907 266 aa1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 PNLIPP16233 465 aa1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 ZNF37AP17032 561 aaPredicted RBP1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 SARSP49591 514 aaKnown RBP1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 TNK2Q07912 1038 aa1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 TARBP2Q15633 366 aaKnown RBP1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 COX20Q5RI15 118 aa1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 ZNF746Q6NUN9 644 aaPredicted RBP1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 PCSK4Q6UW60 755 aa1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 FAM124AQ86V42 546 aa1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 CIR1Q86X95 450 aaPredicted RBP1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 ZC3H12CQ9C0D7 883 aaKnown RBP1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 UNKLQ9H9P5 680 aaKnown RBP1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 NTMQ9P121 344 aa1.99□□□□□ -2.09
RNU6-228P-201ENST00000362700 KLHL14Q9P2G3 628 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms