RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 DDX41Q9UJV9 622 aaKnown RBP10.46□□□□□ -0.74
CALD1-202ENST00000361901 ZMYM6O95789 1325 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 FAM196BA6NMK8 535 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 H0YHG0 523 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 SEMA3EO15041 775 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 RAD17O75943 681 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 PLCG2P16885 1265 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 MAP2K2P36507 400 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 GYS2P54840 703 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 SARNPP82979 210 aaKnown RBP10.45□□□□□ -0.74
CALD1-202ENST00000361901 ZNF174Q15697 407 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 ZNF827Q17R98 1081 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 KLHL10Q6JEL2 608 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 SYT10Q6XYQ8 523 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 FILIP1Q7Z7B0 1213 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 CNNM3Q8NE01 707 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 MRPS27Q92552 414 aaKnown RBP10.45□□□□□ -0.74
CALD1-202ENST00000361901 FAM212AQ96EL1 285 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.45□□□□□ -0.74
CALD1-202ENST00000361901 NPR1P16066 1061 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 SYKP43405 635 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 MYSM1Q5VVJ2 828 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 ANO1Q5XXA6 986 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 LUZP1Q86V48 1076 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 TBC1D22AQ8WUA7 517 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
CALD1-202ENST00000361901 ATP8A2Q9NTI2 1148 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 ARPP21Q9UBL0 812 aaPredicted RBP10.45□□□□□ -0.74
CALD1-202ENST00000361901 XIRP1Q702N8 1843 aaKnown RBP10.45□□□□□ -0.74
CALD1-202ENST00000361901 RTL9Q8NET4 1388 aa10.45□□□□□ -0.74
CALD1-202ENST00000361901 SMTNL1A8MU46 457 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 NR5A1Q13285 461 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 LRRC47Q8N1G4 583 aaKnown RBP10.44□□□□□ -0.74
CALD1-202ENST00000361901 PNMA1Q8ND90 353 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 POLLQ9UGP5 575 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 HOOK1Q9UJC3 728 aaKnown RBP10.44□□□□□ -0.74
CALD1-202ENST00000361901 CTDP1Q9Y5B0 961 aaPredicted RBP10.44□□□□□ -0.74
CALD1-202ENST00000361901 RFX7Q2KHR2 1363 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 MYO1CO00159 1063 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 DEXIO95424 95 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 MCM7P33993 719 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 AFMP43652 599 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 EVX2Q03828 476 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 ZYXQ15942 572 aaKnown RBP10.44□□□□□ -0.74
CALD1-202ENST00000361901 ZSCAN26Q16670 478 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 KCNG4Q8TDN1 519 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 ZNF512BQ96KM6 892 aaPredicted RBP10.44□□□□□ -0.74
CALD1-202ENST00000361901 PLIN2Q99541 437 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 UBA5Q9GZZ9 404 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 PLEKHA8P1O95397 391 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 CTDNEP1O95476 244 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 USP8P40818 1118 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 TYRO3Q06418 890 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 PIK3AP1Q6ZUJ8 805 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 TEKT1Q969V4 418 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 CLIC6Q96NY7 704 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 BRIP1Q9BX63 1249 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 NAT10Q9H0A0 1025 aaKnown RBP10.44□□□□□ -0.74
CALD1-202ENST00000361901 LY9Q9HBG7 655 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 CLIP2Q9UDT6 1046 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 GJA3Q9Y6H8 435 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 ABCC6O95255 1503 aa10.44□□□□□ -0.74
CALD1-202ENST00000361901 CLRN2A0PK11 232 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 NAPAP54920 295 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 GRIK5Q16478 980 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 RPAINQ86UA6 219 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 CNKSR2Q8WXI2 1034 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 MASTLQ96GX5 879 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 BCS1LQ9Y276 419 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 PAXBP1Q9Y5B6 917 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 FRMPD2Q68DX3 1309 aaPredicted RBP10.43□□□□□ -0.74
CALD1-202ENST00000361901 TRIM66O15016 1216 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 AOC3Q16853 763 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 CEP57L1Q8IYX8 460 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 KIF18AQ8NI77 898 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 KCNB2Q92953 911 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 TCRBV5S4A2TA0A5A2 114 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 SSBP05455 408 aaKnown RBP eCLIP10.43□□□□□ -0.74
CALD1-202ENST00000361901 GUCY1A2P33402 732 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 NCBP1Q09161 790 aaKnown RBP10.43□□□□□ -0.74
CALD1-202ENST00000361901 RESTQ13127 1097 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 BRAPQ7Z569 592 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 ENAHQ8N8S7 591 aaPredicted RBP10.43□□□□□ -0.74
CALD1-202ENST00000361901 SCAF8Q9UPN6 1271 aaKnown RBP10.43□□□□□ -0.74
CALD1-202ENST00000361901 TCP10L2B9ZVM9 353 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 NAA30Q147X3 362 aaPredicted RBP10.43□□□□□ -0.74
CALD1-202ENST00000361901 PTPN14Q15678 1187 aa10.43□□□□□ -0.74
CALD1-202ENST00000361901 TRMT1LQ7Z2T5 733 aaKnown RBP10.43□□□□□ -0.74
CALD1-202ENST00000361901 TRIM75PA6NK02 468 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 CALM1P0DP23 149 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 CALM2P0DP24 149 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 CALM3P0DP25 149 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 POLD1P28340 1107 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 SATB1Q01826 763 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 RASGRP4Q8TDF6 673 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 STAG1Q8WVM7 1258 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 JDP2Q8WYK2 163 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 STAMQ92783 540 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 PCDHA7Q9UN72 937 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 KRT2P35908 639 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms