RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 METTL16Q86W50 562 aaKnown RBP24.42■■□□□ 1.5
MAP1LC3A-201ENST00000360668 ZSCAN29Q8IWY8 852 aaPredicted RBP24.42■■□□□ 1.5
MAP1LC3A-201ENST00000360668 MYO1BO43795 1136 aa24.42■■□□□ 1.5
MAP1LC3A-201ENST00000360668 FMNL1O95466 1100 aaPredicted RBP24.42■■□□□ 1.5
MAP1LC3A-201ENST00000360668 SSRP1Q08945 709 aaKnown RBP24.42■■□□□ 1.5
MAP1LC3A-201ENST00000360668 C9orf131Q5VYM1 1079 aa24.42■■□□□ 1.5
MAP1LC3A-201ENST00000360668 MCTP1Q6DN14 999 aa24.42■■□□□ 1.5
MAP1LC3A-201ENST00000360668 CRACR2BQ8N4Y2 399 aaPredicted RBP24.42■■□□□ 1.5
MAP1LC3A-201ENST00000360668 CLRN2A0PK11 232 aa24.41■■□□□ 1.5
MAP1LC3A-201ENST00000360668 PPFIA3O75145 1194 aa24.41■■□□□ 1.5
MAP1LC3A-201ENST00000360668 PNMA1Q8ND90 353 aa24.41■■□□□ 1.5
MAP1LC3A-201ENST00000360668 FAM151AQ8WW52 585 aa24.41■■□□□ 1.5
MAP1LC3A-201ENST00000360668 CCDC17Q96LX7 622 aa24.41■■□□□ 1.5
MAP1LC3A-201ENST00000360668 GMPSP49915 693 aaPredicted RBP24.4■■□□□ 1.5
MAP1LC3A-201ENST00000360668 NBPF11Q86T75 865 aa24.4■■□□□ 1.5
MAP1LC3A-201ENST00000360668 TRIM22Q8IYM9 498 aa24.4■■□□□ 1.5
MAP1LC3A-201ENST00000360668 CTCFLQ8NI51 663 aaPredicted RBP24.4■■□□□ 1.5
MAP1LC3A-201ENST00000360668 WASF1Q92558 559 aa24.4■■□□□ 1.5
MAP1LC3A-201ENST00000360668 PHKBQ93100 1093 aa24.4■■□□□ 1.5
MAP1LC3A-201ENST00000360668 C8orf76Q96K31 380 aa24.4■■□□□ 1.5
MAP1LC3A-201ENST00000360668 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.4■■□□□ 1.5
MAP1LC3A-201ENST00000360668 DNAJC18Q9H819 358 aa24.4■■□□□ 1.5
MAP1LC3A-201ENST00000360668 IGKV6D-41A0A0C4DH26 115 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 TCP10L2B9ZVM9 353 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 WNT10BO00744 389 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 TRAK2O60296 914 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 AKR1B1P15121 316 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 GSE1Q14687 1217 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 CEP95Q96GE4 821 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 TMEM47Q9BQJ4 181 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 SLC26A6Q9BXS9 759 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 TRIM34Q9BYJ4 488 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 ZSCAN16Q9H4T2 348 aaPredicted RBP24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 STX8Q9UNK0 236 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 GJA3Q9Y6H8 435 aa24.39■■□□□ 1.5
MAP1LC3A-201ENST00000360668 ZNF541Q9H0D2 1346 aa24.39■■□□□ 1.49
MAP1LC3A-201ENST00000360668 SBF1O95248 1867 aa24.39■■□□□ 1.49
MAP1LC3A-201ENST00000360668 GREB1LQ9C091 1923 aaPredicted RBP24.39■■□□□ 1.49
MAP1LC3A-201ENST00000360668 KIF5BP33176 963 aa24.38■■□□□ 1.49
MAP1LC3A-201ENST00000360668 PPP4R3BQ5MIZ7 849 aa24.38■■□□□ 1.49
MAP1LC3A-201ENST00000360668 FAM83AQ86UY5 434 aa24.38■■□□□ 1.49
MAP1LC3A-201ENST00000360668 CNTNAP1P78357 1384 aa24.38■■□□□ 1.49
MAP1LC3A-201ENST00000360668 TOP1P11387 765 aaKnown RBP24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 RESTQ13127 1097 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 TATDN1Q6P1N9 297 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 TMTC3Q6ZXV5 915 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 FBXO18Q8NFZ0 1043 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 ALG1Q9BT22 464 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 RNF26Q9BY78 433 aaPredicted RBP24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 MTMR4Q9NYA4 1195 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 RNF181Q9P0P0 153 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 SHTN1A0MZ66 631 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 FUT2Q10981 343 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 FERMT3Q86UX7 667 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 MICALL2Q8IY33 904 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 CSRNP1Q96S65 589 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 VEZTQ9HBM0 779 aa24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 CNOT7Q9UIV1 285 aaKnown RBP24.37■■□□□ 1.49
MAP1LC3A-201ENST00000360668 DEXIO95424 95 aa24.36■■□□□ 1.49
MAP1LC3A-201ENST00000360668 FOSBP53539 338 aa24.36■■□□□ 1.49
MAP1LC3A-201ENST00000360668 GRM4Q14833 912 aa24.36■■□□□ 1.49
MAP1LC3A-201ENST00000360668 NBPF9Q3BBW0 867 aa24.36■■□□□ 1.49
MAP1LC3A-201ENST00000360668 ZNF526Q8TF50 670 aaPredicted RBP24.36■■□□□ 1.49
MAP1LC3A-201ENST00000360668 CHAMP1Q96JM3 812 aa24.36■■□□□ 1.49
MAP1LC3A-201ENST00000360668 HERC5Q9UII4 1024 aaKnown RBP24.36■■□□□ 1.49
MAP1LC3A-201ENST00000360668 FOXD4L6Q3SYB3 417 aaPredicted RBP24.35■■□□□ 1.49
MAP1LC3A-201ENST00000360668 CERKLQ49MI3 558 aaPredicted RBP24.35■■□□□ 1.49
MAP1LC3A-201ENST00000360668 FOXD4L3Q6VB84 417 aaPredicted RBP24.35■■□□□ 1.49
MAP1LC3A-201ENST00000360668 GPBP1L1Q9HC44 474 aaPredicted RBP24.35■■□□□ 1.49
MAP1LC3A-201ENST00000360668 PRPF3O43395 683 aaKnown RBP24.34■■□□□ 1.49
MAP1LC3A-201ENST00000360668 PLEKHA8P1O95397 391 aa24.34■■□□□ 1.49
MAP1LC3A-201ENST00000360668 GNAQP50148 359 aa24.34■■□□□ 1.49
MAP1LC3A-201ENST00000360668 GPC2Q8N158 579 aa24.34■■□□□ 1.49
MAP1LC3A-201ENST00000360668 LMBRD1Q9NUN5 540 aa24.34■■□□□ 1.49
MAP1LC3A-201ENST00000360668 TTLL1O95922 423 aa24.33■■□□□ 1.49
MAP1LC3A-201ENST00000360668 TNNI2P48788 182 aa24.33■■□□□ 1.49
MAP1LC3A-201ENST00000360668 AKAP17AQ02040 695 aaKnown RBP24.33■■□□□ 1.49
MAP1LC3A-201ENST00000360668 CMTR1Q8N1G2 835 aaKnown RBP24.33■■□□□ 1.49
MAP1LC3A-201ENST00000360668 TCHHQ07283 1943 aa24.33■■□□□ 1.49
MAP1LC3A-201ENST00000360668 MYH6P13533 1939 aa24.33■■□□□ 1.48
MAP1LC3A-201ENST00000360668 SLURP2P0DP57 97 aa24.33■■□□□ 1.48
MAP1LC3A-201ENST00000360668 GUCY1B3Q02153 619 aa24.33■■□□□ 1.48
MAP1LC3A-201ENST00000360668 DNM1Q05193 864 aaKnown RBP24.33■■□□□ 1.48
MAP1LC3A-201ENST00000360668 CCDC82Q8N4S0 544 aa24.33■■□□□ 1.48
MAP1LC3A-201ENST00000360668 TMEM87AQ8NBN3 555 aa24.33■■□□□ 1.48
MAP1LC3A-201ENST00000360668 CNTNAP5Q8WYK1 1306 aa24.32■■□□□ 1.48
MAP1LC3A-201ENST00000360668 FAM196BA6NMK8 535 aa24.32■■□□□ 1.48
MAP1LC3A-201ENST00000360668 MPHOSPH10O00566 681 aaKnown RBP24.32■■□□□ 1.48
MAP1LC3A-201ENST00000360668 TNFAIP1Q13829 316 aa24.32■■□□□ 1.48
MAP1LC3A-201ENST00000360668 TRIM29Q14134 588 aa24.32■■□□□ 1.48
MAP1LC3A-201ENST00000360668 SRBD1Q8N5C6 995 aaKnown RBP24.32■■□□□ 1.48
MAP1LC3A-201ENST00000360668 AIFM3Q96NN9 605 aa24.32■■□□□ 1.48
MAP1LC3A-201ENST00000360668 MAD2L2Q9UI95 211 aa24.32■■□□□ 1.48
MAP1LC3A-201ENST00000360668 H7C1D1 291 aa24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 TBC1D12O60347 775 aa24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 PRPF40AO75400 957 aaKnown RBP24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 EGFRP00533 1210 aa24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 GUCY1A2P33402 732 aa24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 KRT85P78386 507 aa24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 CSPP1Q1MSJ5 1256 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms