RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 ZYXQ15942 572 aaKnown RBP13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 TAF12Q16514 161 aa13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 INF2Q27J81 1249 aa13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 DIS3L2Q8IYB7 885 aaKnown RBP13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 TUBB2BQ9BVA1 445 aa13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 ZNF532Q9HCE3 1301 aa13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 ERVV-2B6SEH9 535 aa13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 DKC1O60832 514 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 PEX19P40855 299 aa13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 ZAP70P43403 619 aa13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 PPP2R5BQ15173 497 aa13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 EXOC7Q9UPT5 735 aa13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 USTQ9Y2C2 406 aa13.56□□□□□ -0.24
CCDC144A-204ENST00000360524 CUTAO60888 179 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 GIGYF1O75420 1035 aaPredicted RBP13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 TRIM14Q14142 442 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 NELFBQ8WX92 580 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 SLF1Q9BQI6 1058 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 LZTS2Q9BRK4 669 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 VWA3BQ502W6 1294 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 KRT25Q7Z3Z0 450 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 NELFCDQ8IXH7 590 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 KIFC2Q96AC6 838 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 NOX5Q96PH1 765 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 ZNF500O60304 480 aaPredicted RBP13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 HSPA1LP34931 641 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 SLC1A4P43007 532 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 ZNF131P52739 623 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 NONOQ15233 471 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 GEN1Q17RS7 908 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 DDX17Q92841 729 aaKnown RBP13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 ZNF496Q96IT1 587 aaPredicted RBP13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 CCDC110Q8TBZ0 833 aa13.55□□□□□ -0.24
CCDC144A-204ENST00000360524 ZBED4O75132 1171 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 MYCLP12524 364 aaPredicted RBP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 STRN3Q13033 797 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 PDE1CQ14123 709 aaPredicted RBP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 GPR161Q8N6U8 529 aaKnown RBP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 SUDS3Q9H7L9 328 aaPredicted RBP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 USP21Q9UK80 565 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 ARHGEF35A5YM69 484 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 CEP104O60308 925 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 PDE6BP35913 854 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 ADKP55263 362 aaKnown RBP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 GKAP1Q5VSY0 366 aaPredicted RBP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 SEPT14Q6ZU15 432 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 CCDC24Q8N4L8 307 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 SLAIN2Q9P270 581 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 BIN2Q9UBW5 565 aaPredicted RBP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 CRCPO75575 148 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 ATP5DP30049 168 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 PPP2R5DQ14738 602 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 POSTNQ15063 836 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 FYB2Q5VWT5 728 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 MAPKAPK5Q8IW41 473 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 IFT20Q8IY31 132 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 LMBRD1Q9NUN5 540 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 ALDH1B1P30837 517 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 BRDTQ58F21 947 aaPredicted RBP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 TBC1D22AQ8WUA7 517 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 CASQ2O14958 399 aaPredicted RBP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 GBP7Q8N8V2 638 aaPredicted RBP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 TACO1Q9BSH4 297 aaKnown RBP13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 KIAA0232Q92628 1395 aa13.54□□□□□ -0.24
CCDC144A-204ENST00000360524 SH3BP5O60239 455 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 STX10O60499 249 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 ZWINTO95229 277 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 CCDC14Q49A88 953 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 TGFBRAP1Q8WUH2 860 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 FAM204AQ9H8W3 233 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 NEURL1BA8MQ27 555 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 LIG3P49916 1009 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 USH1GQ495M9 461 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 TMEM2Q9UHN6 1383 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 DISP1Q96F81 1524 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 SNX16P57768 344 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 MGARPQ8TDB4 240 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 ARHGEF2Q92974 986 aaKnown RBP13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 NOP56O00567 594 aaKnown RBP13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 TCIRG1Q13488 830 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 TYW1BQ6NUM6 668 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 CEP128Q6ZU80 1094 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 CMTR1Q8N1G2 835 aaKnown RBP13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 UBL4BQ8N7F7 174 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 ZNF408Q9H9D4 720 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 MYO1AQ9UBC5 1043 aa13.53□□□□□ -0.24
CCDC144A-204ENST00000360524 KIAA1524Q8TCG1 905 aa13.52□□□□□ -0.24
CCDC144A-204ENST00000360524 GBP5Q96PP8 586 aa13.52□□□□□ -0.24
CCDC144A-204ENST00000360524 LRWD1Q9UFC0 647 aa13.52□□□□□ -0.24
CCDC144A-204ENST00000360524 NFE2L3Q9Y4A8 694 aa13.52□□□□□ -0.24
CCDC144A-204ENST00000360524 IVNS1ABPQ9Y6Y0 642 aa13.52□□□□□ -0.24
CCDC144A-204ENST00000360524 KDM2BQ8NHM5 1336 aa13.52□□□□□ -0.24
CCDC144A-204ENST00000360524 CTSWP56202 376 aa13.52□□□□□ -0.24
CCDC144A-204ENST00000360524 TCP10Q12799 353 aa13.52□□□□□ -0.24
CCDC144A-204ENST00000360524 PPFIA1Q13136 1202 aa13.52□□□□□ -0.24
CCDC144A-204ENST00000360524 FNBP4Q8N3X1 1017 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms