RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 KRT10P13645 584 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 PEX26Q7Z412 305 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 NUDCD3Q8IVD9 361 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 ZC3H12CQ9C0D7 883 aaKnown RBP14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 PCDHB15Q9Y5E8 787 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 A0A087WUV0 522 aaPredicted RBP14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 NBPF14Q5TI25 921 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 CCDC197Q8NCU1 140 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 VPS37BQ9H9H4 285 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 PTPN23Q9H3S7 1636 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 PALM3A6NDB9 673 aaPredicted RBP14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 CDR2Q01850 454 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 PPP2R5DQ14738 602 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 MCTP2Q6DN12 878 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 SLF1Q9BQI6 1058 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 VWA3AA6NCI4 1184 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 PIK3R5Q8WYR1 880 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 PYGLP06737 847 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 APOBRQ0VD83 1088 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 CSRNP1Q96S65 589 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 ESYT2A0FGR8 921 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 TTC1Q99614 292 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 MAN1A2O60476 641 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 ANKRD20A4Q4UJ75 823 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 ANKRD20A8PQ5CZ79 823 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 ANKRD20A2Q5SQ80 823 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 ANKRD20A1Q5TYW2 823 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 FCHSD1Q86WN1 690 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 TEX11Q8IYF3 940 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 MAGEB6P1A0A0J9YX57 407 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 EP400NLQ6ZTU2 488 aa14.53□□□□□ -0.08
SRGAP3-201ENST00000360413 CHST3Q7LGC8 479 aa14.52□□□□□ -0.08
SRGAP3-201ENST00000360413 UBE3BQ7Z3V4 1068 aa14.52□□□□□ -0.08
SRGAP3-201ENST00000360413 IFIH1Q9BYX4 1025 aaKnown RBP14.52□□□□□ -0.08
SRGAP3-201ENST00000360413 ANLNQ9NQW6 1124 aa14.52□□□□□ -0.08
SRGAP3-201ENST00000360413 GNA14O95837 355 aa14.52□□□□□ -0.08
SRGAP3-201ENST00000360413 IL15P40933 162 aaPredicted RBP14.52□□□□□ -0.08
SRGAP3-201ENST00000360413 MAN1A1P33908 653 aa14.52□□□□□ -0.08
SRGAP3-201ENST00000360413 PPP2R5BQ15173 497 aa14.52□□□□□ -0.08
SRGAP3-201ENST00000360413 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.52□□□□□ -0.08
SRGAP3-201ENST00000360413 LMNB1P20700 586 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 NFKBIAP25963 317 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 EEF1DP29692 281 aaKnown RBP14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 GRAMD4Q6IC98 578 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 SAAL1Q96ER3 474 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 EIF3CLB5ME19 914 aaKnown RBP14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 SCYL3Q8IZE3 742 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 PIP4K2CQ8TBX8 421 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 RHPN1Q8TCX5 695 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 KRT12Q99456 494 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 EIF3CQ99613 913 aaKnown RBP14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 NUB1Q9Y5A7 615 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 MSH6P52701 1360 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 CYP7A1P22680 504 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 SLC4A4Q9Y6R1 1079 aa14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 SOS1Q07889 1333 aaPredicted RBP14.52□□□□□ -0.09
SRGAP3-201ENST00000360413 RANBP1P43487 201 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 NLRP12P59046 1061 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 MAP3K7O43318 606 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 H0YCG3 227 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 POLR2DO15514 142 aaKnown RBP14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 PAK1Q13153 545 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 ARHGEF6Q15052 776 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 DCUN1D2Q6PH85 259 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 TTC6Q86TZ1 520 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 HELBQ8NG08 1087 aaPredicted RBP14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 TIAM1Q13009 1591 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 SKIP12755 728 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 ICE2Q659A1 982 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 CREB3L3Q68CJ9 461 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 CDC37L1Q7L3B6 337 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 CTTNBP2NLQ9P2B4 639 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 TTC41PQ6P2S7 1318 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 PARP1P09874 1014 aaKnown RBP14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 CCDC68Q9H2F9 335 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 LRGUKQ96M69 825 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 MAPK8IP1Q9UQF2 711 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 ATP2B3Q16720 1220 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 KCTD16Q68DU8 428 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 CSGALNACT2Q8N6G5 542 aa14.51□□□□□ -0.09
SRGAP3-201ENST00000360413 TRPA1O75762 1119 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 CCDC84Q86UT8 332 aaPredicted RBP14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 CEP70Q8NHQ1 597 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 AMOTL2Q9Y2J4 779 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 ANGPTL3Q9Y5C1 460 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 SCHIP1Q9P0W5 487 aaPredicted RBP14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 KIF1CO43896 1103 aaKnown RBP14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 ELMSAN1Q6PJG2 1045 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 TPTE2Q6XPS3 522 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 GRK7Q8WTQ7 553 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 TRIM56Q9BRZ2 755 aaKnown RBP14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 TRPC6Q9Y210 931 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 GUCY2CP25092 1073 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 KSR1Q8IVT5 923 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 KCNH3Q9ULD8 1083 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 SATB2Q9UPW6 733 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 TRIM58Q8NG06 486 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 TYW1Q9NV66 732 aaKnown RBP14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 AZI2Q9H6S1 392 aa14.5□□□□□ -0.09
SRGAP3-201ENST00000360413 TROQ12816 1431 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms