RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 KCNH4Q9UQ05 1017 aa7.61□□□□□ -1.19
SUDS3-201ENST00000360286 NEDD4P46934 1319 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 CCL15-CCL14A0A0B4J2E2 113 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 IGKV6D-41A0A0C4DH26 115 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 TESPA1A2RU30 521 aaPredicted RBP7.6□□□□□ -1.19
SUDS3-201ENST00000360286 MANSC4A6NHS7 340 aaPredicted RBP7.6□□□□□ -1.19
SUDS3-201ENST00000360286 TSPY2A6NKD2 308 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 B4E1Z4 1266 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 USP17L10C9JJH3 530 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 E7EWF7 191 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 TSPY3P0CV98 308 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 TSPY8P0CW00 308 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 EEF2P13639 858 aaKnown RBP7.6□□□□□ -1.19
SUDS3-201ENST00000360286 GTF2A2P52657 109 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 ATP2B2Q01814 1243 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 SNAPC2Q13487 334 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 COL9A3Q14050 684 aaPredicted RBP7.6□□□□□ -1.19
SUDS3-201ENST00000360286 ZYXQ15942 572 aaKnown RBP7.6□□□□□ -1.19
SUDS3-201ENST00000360286 CCL15Q16663 113 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 KIAA1755Q5JYT7 1200 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 GPAT2Q6NUI2 795 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 GADL1Q6ZQY3 521 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 CYB5R4Q7L1T6 521 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 RASEFQ8IZ41 740 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 ZKSCAN3Q9BRR0 538 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 USP26Q9BXU7 913 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 RNF41Q9H4P4 317 aaPredicted RBP7.6□□□□□ -1.19
SUDS3-201ENST00000360286 AS3MTQ9HBK9 375 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 ZNF287Q9HBT7 754 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 IL17RBQ9NRM6 502 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 EMILIN3Q9NT22 766 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 ZSWIM5Q9P217 1185 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 CLIP2Q9UDT6 1046 aa7.6□□□□□ -1.19
SUDS3-201ENST00000360286 A0A0G2JLL6 359 aaPredicted RBP7.59□□□□□ -1.19
SUDS3-201ENST00000360286 BTBD19C9JJ37 291 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 IGF2BP3O00425 579 aaKnown RBP eCLIP7.59□□□□□ -1.19
SUDS3-201ENST00000360286 KDM4AO75164 1064 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 CETPP11597 493 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 HMGCS2P54868 508 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 BACE1P56817 501 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 INHBEP58166 350 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 MTMR2Q13614 643 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 C8orf34Q49A92 452 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 SH3D19Q5HYK7 790 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 USP17L2Q6R6M4 530 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 CHST3Q7LGC8 479 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 PRRT2Q7Z6L0 340 aaPredicted RBP7.59□□□□□ -1.19
SUDS3-201ENST00000360286 IFNL1Q8IU54 200 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 FAM43AQ8N2R8 423 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 JMYQ8N9B5 988 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 CHMP4CQ96CF2 233 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 CEP95Q96GE4 821 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 TBC1D2Q9BYX2 928 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 KANSL2Q9H9L4 492 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 MTMR4Q9NYA4 1195 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 LAMA4Q16363 1823 aa7.59□□□□□ -1.19
SUDS3-201ENST00000360286 PTPRFP10586 1907 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 GREB1LQ9C091 1923 aaPredicted RBP7.58□□□□□ -1.2
SUDS3-201ENST00000360286 PCNTO95613 3336 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 C19orf81C9J6K1 198 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 TRPA1O75762 1119 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 REC8O95072 547 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 TBC1D8O95759 1140 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 PCP11498 1178 aaKnown RBP7.58□□□□□ -1.2
SUDS3-201ENST00000360286 HSPA4P34932 840 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 ICA1Q05084 483 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 SREBF2Q12772 1141 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 TRDNQ13061 729 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 ADCK5Q3MIX3 580 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 TREML2Q5T2D2 321 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 FASTKD5Q7L8L6 764 aaKnown RBP7.58□□□□□ -1.2
SUDS3-201ENST00000360286 REM2Q8IYK8 340 aaPredicted RBP7.58□□□□□ -1.2
SUDS3-201ENST00000360286 NCOA7Q8NI08 942 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 ESR2Q92731 530 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 KCNB2Q92953 911 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 MKL1Q969V6 931 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 FEZ1Q99689 392 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 KRT23Q9C075 422 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 R3HDMLQ9H3Y0 253 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 ARHGEF10LQ9HCE6 1279 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 FOXD4L1Q9NU39 408 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 TCP11L1Q9NUJ3 509 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 WBP1LQ9NX94 342 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 RNF186Q9NXI6 227 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 TMOD4Q9NZQ9 345 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 NYAP2Q9P242 653 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 TSKSQ9UJT2 592 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 TMX2Q9Y320 296 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 SNX14Q9Y5W7 946 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 MYH4Q9Y623 1939 aa7.58□□□□□ -1.2
SUDS3-201ENST00000360286 F5H6K3 240 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 PDHXO00330 501 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 RAD21O60216 631 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 TTLL1O95922 423 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 CPA1P15085 419 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 NOVP48745 357 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 ANTXR2P58335 489 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 MAP2K1Q02750 393 aaPredicted RBP7.57□□□□□ -1.2
SUDS3-201ENST00000360286 KLRC3Q07444 240 aa7.57□□□□□ -1.2
SUDS3-201ENST00000360286 TSGA10IPQ3SY00 556 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms