RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SPOUT1Q5T280 376 aaKnown RBP10.69□□□□□ -0.7
CUX1-203ENST00000360264 OTUD7BQ6GQQ9 843 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 CCDC105Q8IYK2 499 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 CTTNBP2NLQ9P2B4 639 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 CCDC87Q9NVE4 849 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 ARHGAP4P98171 946 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 PDE4DQ08499 809 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 RBBP5Q15291 538 aaKnown RBP10.69□□□□□ -0.7
CUX1-203ENST00000360264 ANKRD20A3Q5VUR7 823 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 MICALL1Q8N3F8 863 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 ADPGKQ9BRR6 497 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 DCTPP1Q9H773 170 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 GPCPD1Q9NPB8 672 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 ARHGEF10O15013 1369 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 ZNF518AQ6AHZ1 1483 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 F8W8V4 182 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 PPP2R5AQ15172 486 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 CCDC38Q502W7 563 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 CDC37L1Q7L3B6 337 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 SMCR8Q8TEV9 937 aaPredicted RBP10.69□□□□□ -0.7
CUX1-203ENST00000360264 GRK7Q8WTQ7 553 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 VPS18Q9P253 973 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 ASIC3Q9UHC3 531 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
CUX1-203ENST00000360264 DDX21Q9NR30 783 aaKnown RBP eCLIP10.69□□□□□ -0.71e-7■□□□□ 10.9
CUX1-203ENST00000360264 PAK2Q13177 524 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 KRT12Q99456 494 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 MAGEF1Q9HAY2 307 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 BAG5Q9UL15 447 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 XRCC5P13010 732 aaKnown RBP10.68□□□□□ -0.7
CUX1-203ENST00000360264 ALDH1B1P30837 517 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 TFCP2Q12800 502 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 AS3MTQ9HBK9 375 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 RIMBP2O15034 1052 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 PTPREP23469 700 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 Q9H521 79 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 KNL1Q8NG31 2342 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 YARSP54577 528 aaKnown RBP10.68□□□□□ -0.7
CUX1-203ENST00000360264 SYT10Q6XYQ8 523 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 RSAD2Q8WXG1 361 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 ZNF174Q15697 407 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 CCDC68Q9H2F9 335 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 RPRD2Q5VT52 1461 aaKnown RBP10.68□□□□□ -0.7
CUX1-203ENST00000360264 TLDC2A0PJX2 215 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 XPOTO43592 962 aaKnown RBP10.68□□□□□ -0.7
CUX1-203ENST00000360264 RHOXF2BP0C7M4 288 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 MAN1A1P33908 653 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 SLC39A6Q13433 755 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 RHOXF2Q9BQY4 288 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 NBPF3Q9H094 633 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 A0A1B0GVL5 298 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 NCAPH2Q6IBW4 605 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 CLCN1P35523 988 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 NDUFAB1O14561 156 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 GLG1Q92896 1179 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 FAM193BQ96PV7 902 aaPredicted RBP10.68□□□□□ -0.7
CUX1-203ENST00000360264 EXOC3O60645 756 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 STAM2O75886 525 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 ANXA1P04083 346 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 APOBRQ0VD83 1088 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 HERC4Q5GLZ8 1057 aaPredicted RBP10.68□□□□□ -0.7
CUX1-203ENST00000360264 C20orf194Q5TEA3 1177 aa10.68□□□□□ -0.7
CUX1-203ENST00000360264 ARHGEF2Q92974 986 aaKnown RBP10.68□□□□□ -0.7
CUX1-203ENST00000360264 EIF4A2Q14240 407 aaKnown RBP10.67□□□□□ -0.7
CUX1-203ENST00000360264 STX17P56962 302 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 TRERF1Q96PN7 1200 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 TTC1Q99614 292 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 NPATQ14207 1427 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 EYA2O00167 538 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 BBOF1Q8ND07 529 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 C1orf112Q9NSG2 853 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 ESYT2A0FGR8 921 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 ITGA6P23229 1130 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 PROCA1Q8NCQ7 364 aaPredicted RBP10.67□□□□□ -0.7
CUX1-203ENST00000360264 CCDC51Q96ER9 411 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 KIF1BO60333 1816 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 PPP1R2P3Q6NXS1 205 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 PEX26Q7Z412 305 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 RABGAP1Q9Y3P9 1069 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 GAS7O60861 476 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 NONOQ15233 471 aaKnown RBP eCLIP10.67□□□□□ -0.71e-6■■■□□ 18.5
CUX1-203ENST00000360264 PIK3AP1Q6ZUJ8 805 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 ATRXP46100 2492 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 MYCT1Q8N699 235 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 H7C1D1 291 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 DCAF15Q66K64 600 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 TCEANC2Q96MN5 208 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 GINS2Q9Y248 185 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 ARHGEF37A1IGU5 675 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 ZNF853P0CG23 659 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 RINT1Q6NUQ1 792 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 PSPC1Q8WXF1 523 aaKnown RBP10.67□□□□□ -0.7
CUX1-203ENST00000360264 S100BP04271 92 aaPredicted RBP10.67□□□□□ -0.7
CUX1-203ENST00000360264 CEBPAP49715 358 aaPredicted RBP10.67□□□□□ -0.7
CUX1-203ENST00000360264 MAPK8IP2Q13387 824 aaPredicted RBP10.67□□□□□ -0.7
CUX1-203ENST00000360264 ARHGEF16Q5VV41 709 aa10.67□□□□□ -0.7
CUX1-203ENST00000360264 METTL22Q9BUU2 404 aaPredicted RBP10.67□□□□□ -0.7
CUX1-203ENST00000360264 SBNO2Q9Y2G9 1366 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 RGS16O15492 202 aaPredicted RBP10.66□□□□□ -0.7
CUX1-203ENST00000360264 PPFIA3O75145 1194 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms