RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 DACH1Q9UI36 760 aa30.19■■■□□ 2.42
CUEDC1-201ENST00000360238 MAN1B1Q9UKM7 699 aa30.19■■■□□ 2.42
CUEDC1-201ENST00000360238 RTCBQ9Y3I0 505 aaKnown RBP30.19■■■□□ 2.42
CUEDC1-201ENST00000360238 V9GY48 417 aaPredicted RBP30.19■■■□□ 2.42
CUEDC1-201ENST00000360238 FOXN1O15353 648 aa30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 BMP6P22004 513 aa30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 PRDX5P30044 214 aa30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 SARSP49591 514 aaKnown RBP30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 SYCP1Q15431 976 aa30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 SERTAD1Q9UHV2 236 aa30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 NT5C2P49902 561 aa30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 UBASH3AP57075 661 aa30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 SPTY2D1Q68D10 685 aaPredicted RBP30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 CTCFLQ8NI51 663 aaPredicted RBP30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 NGLY1Q96IV0 654 aa30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 C8orf37Q96NL8 207 aa30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 CSRNP2Q9H175 543 aa30.18■■■□□ 2.42
CUEDC1-201ENST00000360238 KIF2AO00139 706 aaPredicted RBP30.17■■■□□ 2.42
CUEDC1-201ENST00000360238 ACTN4O43707 911 aaKnown RBP30.17■■■□□ 2.42
CUEDC1-201ENST00000360238 TM4SF1P30408 202 aa30.17■■■□□ 2.42
CUEDC1-201ENST00000360238 MLKLQ8NB16 471 aa30.17■■■□□ 2.42
CUEDC1-201ENST00000360238 CCDC112Q8NEF3 446 aa30.17■■■□□ 2.42
CUEDC1-201ENST00000360238 SMARCE1Q969G3 411 aa30.17■■■□□ 2.42
CUEDC1-201ENST00000360238 SERPINC1P01008 464 aa30.17■■■□□ 2.42
CUEDC1-201ENST00000360238 CCNL1Q9UK58 526 aaPredicted RBP30.17■■■□□ 2.42
CUEDC1-201ENST00000360238 PDE4BQ07343 736 aa30.16■■■□□ 2.42
CUEDC1-201ENST00000360238 TNFRSF25Q93038 417 aa30.16■■■□□ 2.42
CUEDC1-201ENST00000360238 CCDC34Q96HJ3 373 aa30.16■■■□□ 2.42
CUEDC1-201ENST00000360238 ATP2B1P20020 1258 aa30.15■■■□□ 2.42
CUEDC1-201ENST00000360238 MORC3Q14149 939 aa30.15■■■□□ 2.42
CUEDC1-201ENST00000360238 FERMT2Q96AC1 680 aa30.15■■■□□ 2.42
CUEDC1-201ENST00000360238 FAM205CA6NFA0 338 aa30.15■■■□□ 2.42
CUEDC1-201ENST00000360238 PRR29P0C7W0 189 aa30.15■■■□□ 2.42
CUEDC1-201ENST00000360238 ANKRD7Q92527 254 aa30.15■■■□□ 2.42
CUEDC1-201ENST00000360238 PSDA5PKW4 1024 aaPredicted RBP30.14■■■□□ 2.42
CUEDC1-201ENST00000360238 SPATA20Q8TB22 786 aa30.14■■■□□ 2.42
CUEDC1-201ENST00000360238 FANCLQ9NW38 375 aa30.14■■■□□ 2.42
CUEDC1-201ENST00000360238 NPY5RQ15761 445 aa30.14■■■□□ 2.41
CUEDC1-201ENST00000360238 CFAP100Q494V2 611 aa30.14■■■□□ 2.41
CUEDC1-201ENST00000360238 DZIP1Q86YF9 867 aaKnown RBP30.14■■■□□ 2.41
CUEDC1-201ENST00000360238 EARS2Q5JPH6 523 aaKnown RBP30.13■■■□□ 2.41
CUEDC1-201ENST00000360238 VSTM4Q8IW00 320 aa30.13■■■□□ 2.41
CUEDC1-201ENST00000360238 DPF2Q92785 391 aa30.13■■■□□ 2.41
CUEDC1-201ENST00000360238 ARHGEF1Q92888 912 aaKnown RBP30.13■■■□□ 2.41
CUEDC1-201ENST00000360238 NAV1Q8NEY1 1877 aa30.13■■■□□ 2.41
CUEDC1-201ENST00000360238 hCG_1642624A0A1W2PR95 340 aa30.13■■■□□ 2.41
CUEDC1-201ENST00000360238 EVX2Q03828 476 aa30.13■■■□□ 2.41
CUEDC1-201ENST00000360238 E4F1Q66K89 784 aaPredicted RBP30.13■■■□□ 2.41
CUEDC1-201ENST00000360238 FNBP4Q8N3X1 1017 aaPredicted RBP30.13■■■□□ 2.41
CUEDC1-201ENST00000360238 SRBD1Q8N5C6 995 aaKnown RBP30.13■■■□□ 2.41
CUEDC1-201ENST00000360238 TXNRD3Q86VQ6 643 aa30.12■■■□□ 2.41
CUEDC1-201ENST00000360238 ENOX1Q8TC92 643 aaKnown RBP30.12■■■□□ 2.41
CUEDC1-201ENST00000360238 UBE2Q2Q8WVN8 375 aa30.12■■■□□ 2.41
CUEDC1-201ENST00000360238 TRMT1Q9NXH9 659 aaKnown RBP30.12■■■□□ 2.41
CUEDC1-201ENST00000360238 NMT2O60551 498 aa30.11■■■□□ 2.41
CUEDC1-201ENST00000360238 CYP2D6P10635 497 aa30.11■■■□□ 2.41
CUEDC1-201ENST00000360238 FAM47AQ5JRC9 791 aa30.11■■■□□ 2.41
CUEDC1-201ENST00000360238 USP49Q70CQ1 688 aa30.11■■■□□ 2.41
CUEDC1-201ENST00000360238 CCDC24Q8N4L8 307 aa30.11■■■□□ 2.41
CUEDC1-201ENST00000360238 PDILTQ8N807 584 aa30.11■■■□□ 2.41
CUEDC1-201ENST00000360238 TSPY2A6NKD2 308 aa30.1■■■□□ 2.41
CUEDC1-201ENST00000360238 CT47A1Q5JQC4 288 aaPredicted RBP30.1■■■□□ 2.41
CUEDC1-201ENST00000360238 ROBO3Q96MS0 1386 aa30.1■■■□□ 2.41
CUEDC1-201ENST00000360238 SCG2P13521 617 aa30.1■■■□□ 2.41
CUEDC1-201ENST00000360238 KIF5BP33176 963 aa30.1■■■□□ 2.41
CUEDC1-201ENST00000360238 TTC38Q5R3I4 469 aa30.1■■■□□ 2.41
CUEDC1-201ENST00000360238 WDR66Q8TBY9 1149 aa30.1■■■□□ 2.41
CUEDC1-201ENST00000360238 ZNF592Q92610 1267 aa30.1■■■□□ 2.41
CUEDC1-201ENST00000360238 LEMD3Q9Y2U8 911 aa30.1■■■□□ 2.41
CUEDC1-201ENST00000360238 ZNF18P17022 549 aa30.09■■■□□ 2.41
CUEDC1-201ENST00000360238 TRAPPC10P48553 1259 aa30.09■■■□□ 2.41
CUEDC1-201ENST00000360238 AMIGO3Q86WK7 504 aa30.09■■■□□ 2.41
CUEDC1-201ENST00000360238 SLFN14P0C7P3 912 aa30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 PFKFB3Q16875 520 aaPredicted RBP30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 GRAMD1CQ8IYS0 662 aa30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 PPP1R13BQ96KQ4 1090 aa30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 MCM9Q9NXL9 1143 aa30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 MKRN1Q9UHC7 482 aaKnown RBP30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 CCP110O43303 1012 aa30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 TUBB4AP04350 444 aa30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 ATP2C1P98194 919 aaPredicted RBP30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 GRAPQ13588 217 aa30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 RCSD1Q6JBY9 416 aa30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 KIF18AQ8NI77 898 aa30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 GRAPLQ8TC17 118 aaPredicted RBP30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 CCDC94Q9BW85 323 aaPredicted RBP30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 NFE2L3Q9Y4A8 694 aa30.08■■■□□ 2.41
CUEDC1-201ENST00000360238 NPHP1O15259 732 aa30.07■■■□□ 2.4
CUEDC1-201ENST00000360238 TOP1P11387 765 aaKnown RBP30.07■■■□□ 2.4
CUEDC1-201ENST00000360238 ERCC5P28715 1186 aaPredicted RBP30.07■■■□□ 2.4
CUEDC1-201ENST00000360238 PLCD1P51178 756 aa30.07■■■□□ 2.4
CUEDC1-201ENST00000360238 FMR1Q06787 632 aaKnown RBP eCLIP30.07■■■□□ 2.4
CUEDC1-201ENST00000360238 NCBP1Q09161 790 aaKnown RBP30.07■■■□□ 2.4
CUEDC1-201ENST00000360238 SH3RF1Q7Z6J0 888 aa30.07■■■□□ 2.4
CUEDC1-201ENST00000360238 SYMPKQ92797 1274 aaKnown RBP30.07■■■□□ 2.4
CUEDC1-201ENST00000360238 LDHBP07195 334 aaKnown RBP30.07■■■□□ 2.4
CUEDC1-201ENST00000360238 DHX58Q96C10 678 aa30.07■■■□□ 2.4
CUEDC1-201ENST00000360238 TMX1Q9H3N1 280 aa30.07■■■□□ 2.4
CUEDC1-201ENST00000360238 A0A087X0B3 334 aa30.06■■■□□ 2.4
CUEDC1-201ENST00000360238 C12orf60Q5U649 245 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms