RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 CFAP58Q5T655 872 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 SPATA1Q5VX52 437 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 ZKSCAN4Q969J2 545 aaPredicted RBP12.84□□□□□ -0.35
CNOT3-202ENST00000358389 TBC1D31Q96DN5 1066 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 KCNJ14Q9UNX9 436 aa12.84□□□□□ -0.35
CNOT3-202ENST00000358389 PPP1R12BO60237 982 aaPredicted RBP12.83□□□□□ -0.36
CNOT3-202ENST00000358389 GRIN1Q05586 938 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 MSL3Q8N5Y2 521 aaKnown RBP12.83□□□□□ -0.36
CNOT3-202ENST00000358389 ARL8AQ96BM9 186 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 CARD10Q9BWT7 1032 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 NEXMIFQ5QGS0 1516 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 ERVK-24P63145 666 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 SLC39A6Q13433 755 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 CCNI2Q6ZMN8 369 aaPredicted RBP12.83□□□□□ -0.36
CNOT3-202ENST00000358389 FMNL3Q8IVF7 1028 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 ZNF526Q8TF50 670 aaPredicted RBP12.83□□□□□ -0.36
CNOT3-202ENST00000358389 HAUS7Q99871 368 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 TRIM6Q9C030 488 aaPredicted RBP12.83□□□□□ -0.36
CNOT3-202ENST00000358389 FAM184BQ9ULE4 1060 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 GOLGA6L10A6NI86 522 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 BTBD18B2RXH4 712 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 GYPCP04921 128 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 SEC24CP53992 1094 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 NNTQ13423 1086 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 SNCBQ16143 134 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 MIEF2Q96C03 454 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 HELLSQ9NRZ9 838 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 LUC7L2Q9Y383 392 aaKnown RBP12.83□□□□□ -0.36
CNOT3-202ENST00000358389 SALL1Q9NSC2 1324 aa12.83□□□□□ -0.36
CNOT3-202ENST00000358389 ZNF18P17022 549 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 PPARAQ07869 468 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 TRIM22Q8IYM9 498 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 PRPF38AQ8NAV1 312 aaKnown RBP12.82□□□□□ -0.36
CNOT3-202ENST00000358389 NBPF3Q9H094 633 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 MYO1AQ9UBC5 1043 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 HPSEQ9Y251 543 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 RNF113AO15541 343 aaKnown RBP12.82□□□□□ -0.36
CNOT3-202ENST00000358389 NDUFA10O95299 355 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 CCDC96Q2M329 555 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 ABHD10Q9NUJ1 306 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 GUCY2FP51841 1108 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 KANK3Q6NY19 840 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 EEF2KMTQ96G04 330 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.82□□□□□ -0.361e-7■■■□□ 16.9
CNOT3-202ENST00000358389 BAIAP2L1Q9UHR4 511 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 SBNO1A3KN83 1393 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
CNOT3-202ENST00000358389 CXCR5P32302 372 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 CCDC51Q96ER9 411 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 ANKRD26Q9UPS8 1709 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 KRT14P02533 472 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 EZH2Q15910 746 aaKnown RBP12.81□□□□□ -0.36
CNOT3-202ENST00000358389 METTL24Q5JXM2 366 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 USP49Q70CQ1 688 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 BLZF1Q9H2G9 400 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 HAUS4Q9H6D7 363 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 MAST3O60307 1309 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 ZBTB43O43298 467 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 PAFAH1B1P43034 410 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 SSRP1Q08945 709 aaKnown RBP12.81□□□□□ -0.36
CNOT3-202ENST00000358389 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
CNOT3-202ENST00000358389 PPP1R12AO14974 1030 aaPredicted RBP12.81□□□□□ -0.36
CNOT3-202ENST00000358389 PDHBP11177 359 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 LMBR1LQ6UX01 489 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 COPS6Q7L5N1 327 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 EHBP1Q8NDI1 1231 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 XAGE3Q8WTP9 111 aa12.81□□□□□ -0.36
CNOT3-202ENST00000358389 ADD3Q9UEY8 706 aaKnown RBP12.81□□□□□ -0.36
CNOT3-202ENST00000358389 UBE2Q2LH0YL09 131 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 AGPSO00116 658 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 TRIM21P19474 475 aaKnown RBP12.8□□□□□ -0.36
CNOT3-202ENST00000358389 ERCC5P28715 1186 aaPredicted RBP12.8□□□□□ -0.36
CNOT3-202ENST00000358389 CYP27A1Q02318 531 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 APBA1Q02410 837 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 CHRNA2Q15822 529 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 CCDC43Q96MW1 224 aaKnown RBP12.8□□□□□ -0.36
CNOT3-202ENST00000358389 CHD1O14646 1710 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 KDRP35968 1356 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 M0R2C6 588 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 BACH1O14867 736 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 ZPR1O75312 459 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 FGAP02671 866 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 VAV2P52735 878 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 KIF5AQ12840 1032 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 MORC3Q14149 939 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 SPA17Q15506 151 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 TEX11Q8IYF3 940 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 ADAMTS2O95450 1211 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 GCFC2P16383 781 aaKnown RBP12.8□□□□□ -0.36
CNOT3-202ENST00000358389 RNASE9P60153 205 aaKnown RBP12.8□□□□□ -0.36
CNOT3-202ENST00000358389 KRT83P78385 493 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 HLTFQ14527 1009 aaKnown RBP eCLIP12.8□□□□□ -0.36
CNOT3-202ENST00000358389 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 RPGRIP1Q96KN7 1286 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 LRRC1Q9BTT6 524 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 SLC40A1Q9NP59 571 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms