RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 KRT222Q8N1A0 295 aa23.32■■□□□ 1.32
COL13A1-202ENST00000357811 TMTC2Q8N394 836 aa23.32■■□□□ 1.32
COL13A1-202ENST00000357811 MLKLQ8NB16 471 aa23.32■■□□□ 1.32
COL13A1-202ENST00000357811 ZNF384Q8TF68 577 aa23.32■■□□□ 1.32
COL13A1-202ENST00000357811 SEC31AO94979 1220 aaKnown RBP23.31■■□□□ 1.32
COL13A1-202ENST00000357811 CATIPQ7Z7H3 387 aa23.31■■□□□ 1.32
COL13A1-202ENST00000357811 SLC51AQ86UW1 340 aa23.31■■□□□ 1.32
COL13A1-202ENST00000357811 ZNF18P17022 549 aa23.31■■□□□ 1.32
COL13A1-202ENST00000357811 KRT2P35908 639 aa23.31■■□□□ 1.32
COL13A1-202ENST00000357811 SARSP49591 514 aaKnown RBP23.31■■□□□ 1.32
COL13A1-202ENST00000357811 GTPBP4Q9BZE4 634 aaKnown RBP23.31■■□□□ 1.32
COL13A1-202ENST00000357811 ARHGAP6O43182 974 aa23.31■■□□□ 1.32
COL13A1-202ENST00000357811 CCT6AP40227 531 aaKnown RBP23.31■■□□□ 1.32
COL13A1-202ENST00000357811 ANKRD18AQ8IVF6 992 aa23.31■■□□□ 1.32
COL13A1-202ENST00000357811 CELF1Q92879 486 aaKnown RBP23.31■■□□□ 1.32
COL13A1-202ENST00000357811 RIOK1Q9BRS2 568 aaKnown RBP23.3■■□□□ 1.32
COL13A1-202ENST00000357811 PARP3Q9Y6F1 533 aa23.3■■□□□ 1.32
COL13A1-202ENST00000357811 MYH2Q9UKX2 1941 aa23.3■■□□□ 1.32
COL13A1-202ENST00000357811 MCM7P33993 719 aa23.3■■□□□ 1.32
COL13A1-202ENST00000357811 PIK3AP1Q6ZUJ8 805 aa23.3■■□□□ 1.32
COL13A1-202ENST00000357811 ENOX1Q8TC92 643 aaKnown RBP23.3■■□□□ 1.32
COL13A1-202ENST00000357811 CEP131Q9UPN4 1083 aa23.3■■□□□ 1.32
COL13A1-202ENST00000357811 NUTM2AQ8IVF1 878 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-202ENST00000357811 PAGE5Q96GU1 130 aa23.29■■□□□ 1.32
COL13A1-202ENST00000357811 TAF1P21675 1872 aa23.29■■□□□ 1.32
COL13A1-202ENST00000357811 NUTM2BA6NNL0 878 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-202ENST00000357811 NUTM2EB1AL46 878 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-202ENST00000357811 ZSCAN12O43309 604 aa23.29■■□□□ 1.32
COL13A1-202ENST00000357811 XBP1P17861 261 aa23.29■■□□□ 1.32
COL13A1-202ENST00000357811 PTGDRQ13258 359 aa23.29■■□□□ 1.32
COL13A1-202ENST00000357811 TEX35Q5T0J7 233 aa23.29■■□□□ 1.32
COL13A1-202ENST00000357811 IQCA1Q86XH1 822 aa23.29■■□□□ 1.32
COL13A1-202ENST00000357811 RNF26Q9BY78 433 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-202ENST00000357811 CASQ1P31415 396 aa23.28■■□□□ 1.32
COL13A1-202ENST00000357811 CDC5LQ99459 802 aaKnown RBP23.28■■□□□ 1.32
COL13A1-202ENST00000357811 MRPL44Q9H9J2 332 aaKnown RBP23.28■■□□□ 1.32
COL13A1-202ENST00000357811 CHD4Q14839 1912 aa23.28■■□□□ 1.32
COL13A1-202ENST00000357811 BAZ2AQ9UIF9 1905 aaKnown RBP23.28■■□□□ 1.32
COL13A1-202ENST00000357811 PLCD1P51178 756 aa23.28■■□□□ 1.32
COL13A1-202ENST00000357811 TBX2Q13207 712 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-202ENST00000357811 CAVIN4Q5BKX8 364 aa23.28■■□□□ 1.32
COL13A1-202ENST00000357811 CTR9Q6PD62 1173 aa23.28■■□□□ 1.32
COL13A1-202ENST00000357811 MARCH10Q8NA82 808 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-202ENST00000357811 COL1A1P02452 1464 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-202ENST00000357811 KCNJ6P48051 423 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 RBL2Q08999 1139 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 DPYDQ12882 1025 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 SRBD1Q8N5C6 995 aaKnown RBP23.27■■□□□ 1.32
COL13A1-202ENST00000357811 RASGRP4Q8TDF6 673 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 PHF20Q9BVI0 1012 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 GNL3LQ9NVN8 582 aaKnown RBP23.27■■□□□ 1.32
COL13A1-202ENST00000357811 DACH1Q9UI36 760 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 ERICH4A6NGS2 130 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 PRDX5P30044 214 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 FUT2Q10981 343 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 TROAPQ12815 778 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 PARP10Q53GL7 1025 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 FAM84BQ96KN1 310 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-202ENST00000357811 CTNND2Q9UQB3 1225 aa23.27■■□□□ 1.32
COL13A1-202ENST00000357811 PHLPP2Q6ZVD8 1323 aa23.26■■□□□ 1.31
COL13A1-202ENST00000357811 CCP110O43303 1012 aa23.26■■□□□ 1.31
COL13A1-202ENST00000357811 TFRCP02786 760 aaKnown RBP23.26■■□□□ 1.31
COL13A1-202ENST00000357811 IGSF22Q8N9C0 903 aa23.26■■□□□ 1.31
COL13A1-202ENST00000357811 PLIN2Q99541 437 aa23.26■■□□□ 1.31
COL13A1-202ENST00000357811 SYNRGQ9UMZ2 1314 aa23.26■■□□□ 1.31
COL13A1-202ENST00000357811 H2AFXP16104 143 aaPredicted RBP23.26■■□□□ 1.31
COL13A1-202ENST00000357811 TTC38Q5R3I4 469 aa23.26■■□□□ 1.31
COL13A1-202ENST00000357811 NT5DC1Q5TFE4 455 aa23.26■■□□□ 1.31
COL13A1-202ENST00000357811 EEF2KMTQ96G04 330 aa23.26■■□□□ 1.31
COL13A1-202ENST00000357811 MINPP1Q9UNW1 487 aa23.26■■□□□ 1.31
COL13A1-202ENST00000357811 NLRP5P59047 1200 aa23.25■■□□□ 1.31
COL13A1-202ENST00000357811 CCDC12Q8WUD4 166 aaPredicted RBP23.25■■□□□ 1.31
COL13A1-202ENST00000357811 ABCA3Q99758 1704 aa23.25■■□□□ 1.31
COL13A1-202ENST00000357811 NR1I3Q14994 352 aa23.25■■□□□ 1.31
COL13A1-202ENST00000357811 ZNF579Q8NAF0 562 aaKnown RBP23.25■■□□□ 1.31
COL13A1-202ENST00000357811 GPKOWQ92917 476 aaPredicted RBP eCLIP23.25■■□□□ 1.31
COL13A1-202ENST00000357811 RTL9Q8NET4 1388 aa23.25■■□□□ 1.31
COL13A1-202ENST00000357811 SLFN14P0C7P3 912 aa23.25■■□□□ 1.31
COL13A1-202ENST00000357811 AK7Q96M32 723 aa23.25■■□□□ 1.31
COL13A1-202ENST00000357811 DISP2A7MBM2 1401 aa23.24■■□□□ 1.31
COL13A1-202ENST00000357811 VPS16Q9H269 839 aa23.24■■□□□ 1.31
COL13A1-202ENST00000357811 MECOMQ03112 1051 aa23.24■■□□□ 1.31
COL13A1-202ENST00000357811 RAD9BQ6WBX8 426 aa23.24■■□□□ 1.31
COL13A1-202ENST00000357811 ANKRD36CQ5JPF3 1778 aa23.23■■□□□ 1.31
COL13A1-202ENST00000357811 POLR3GO15318 223 aaPredicted RBP23.23■■□□□ 1.31
COL13A1-202ENST00000357811 STX10O60499 249 aa23.23■■□□□ 1.31
COL13A1-202ENST00000357811 TADA3O75528 432 aa23.23■■□□□ 1.31
COL13A1-202ENST00000357811 PPFIBP1Q86W92 1011 aa23.23■■□□□ 1.31
COL13A1-202ENST00000357811 FHOD1Q9Y613 1164 aa23.23■■□□□ 1.31
COL13A1-202ENST00000357811 AKR1B15C9JRZ8 316 aaPredicted RBP23.23■■□□□ 1.31
COL13A1-202ENST00000357811 CASP14P31944 242 aa23.23■■□□□ 1.31
COL13A1-202ENST00000357811 NPY5RQ15761 445 aa23.23■■□□□ 1.31
COL13A1-202ENST00000357811 KANK3Q6NY19 840 aa23.23■■□□□ 1.31
COL13A1-202ENST00000357811 CTCFLQ8NI51 663 aaPredicted RBP23.23■■□□□ 1.31
COL13A1-202ENST00000357811 PRPF3O43395 683 aaKnown RBP23.22■■□□□ 1.31
COL13A1-202ENST00000357811 ABL1P00519 1130 aa23.22■■□□□ 1.31
COL13A1-202ENST00000357811 CUL4BQ13620 913 aa23.22■■□□□ 1.31
COL13A1-202ENST00000357811 DHX8Q14562 1220 aaKnown RBP23.22■■□□□ 1.31
COL13A1-202ENST00000357811 RRAGBQ5VZM2 374 aa23.22■■□□□ 1.31
COL13A1-202ENST00000357811 BRMS1Q9HCU9 246 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms