RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 UBE2Q2LH0YL09 131 aa20.13■□□□□ 0.81
RTN4-204ENST00000357732 AKAP17AQ02040 695 aaKnown RBP20.13■□□□□ 0.81
RTN4-204ENST00000357732 IGSF22Q8N9C0 903 aa20.13■□□□□ 0.81
RTN4-204ENST00000357732 MYO1AQ9UBC5 1043 aa20.13■□□□□ 0.81
RTN4-204ENST00000357732 TTF2Q9UNY4 1162 aaKnown RBP20.13■□□□□ 0.81
RTN4-204ENST00000357732 TACC3Q9Y6A5 838 aa20.13■□□□□ 0.81
RTN4-204ENST00000357732 SLC4A4Q9Y6R1 1079 aa20.13■□□□□ 0.81
RTN4-204ENST00000357732 MYH6P13533 1939 aa20.12■□□□□ 0.81
RTN4-204ENST00000357732 NR5A1Q13285 461 aa20.12■□□□□ 0.81
RTN4-204ENST00000357732 SMC1AQ14683 1233 aaKnown RBP20.12■□□□□ 0.81
RTN4-204ENST00000357732 CDC23Q9UJX2 597 aa20.12■□□□□ 0.81
RTN4-204ENST00000357732 IQSEC3Q9UPP2 1182 aaPredicted RBP20.12■□□□□ 0.81
RTN4-204ENST00000357732 SNAP23O00161 211 aa20.12■□□□□ 0.81
RTN4-204ENST00000357732 MFAP3LO75121 409 aa20.12■□□□□ 0.81
RTN4-204ENST00000357732 PCP11498 1178 aaKnown RBP20.12■□□□□ 0.81
RTN4-204ENST00000357732 KRT2P35908 639 aa20.12■□□□□ 0.81
RTN4-204ENST00000357732 ZNF827Q17R98 1081 aa20.12■□□□□ 0.81
RTN4-204ENST00000357732 ESR2Q92731 530 aa20.12■□□□□ 0.81
RTN4-204ENST00000357732 FUT8Q9BYC5 575 aa20.12■□□□□ 0.81
RTN4-204ENST00000357732 CABP5Q9NP86 173 aa20.12■□□□□ 0.81
RTN4-204ENST00000357732 PSD3Q9NYI0 1048 aa20.12■□□□□ 0.81
RTN4-204ENST00000357732 ITGB4P16144 1822 aa20.11■□□□□ 0.81
RTN4-204ENST00000357732 SEC31AO94979 1220 aaKnown RBP20.11■□□□□ 0.81
RTN4-204ENST00000357732 CHMP4BP1P59074 171 aa20.11■□□□□ 0.81
RTN4-204ENST00000357732 TRIM14Q14142 442 aa20.11■□□□□ 0.81
RTN4-204ENST00000357732 PHF20Q9BVI0 1012 aa20.11■□□□□ 0.81
RTN4-204ENST00000357732 MRPL44Q9H9J2 332 aaKnown RBP20.11■□□□□ 0.81
RTN4-204ENST00000357732 BRMS1Q9HCU9 246 aa20.11■□□□□ 0.81
RTN4-204ENST00000357732 RBM28Q9NW13 759 aaKnown RBP20.11■□□□□ 0.81
RTN4-204ENST00000357732 SASH3O75995 380 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 USP5P45974 858 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 SPAG1Q07617 926 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 DPYDQ12882 1025 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 HSP90AA4PQ58FG1 418 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 MUM1L1Q5H9M0 696 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 ZNF34Q8IZ26 560 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 PAGE5Q96GU1 130 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 BTG4Q9NY30 223 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 PRPF3O43395 683 aaKnown RBP20.1■□□□□ 0.81
RTN4-204ENST00000357732 CALM1P0DP23 149 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 CALM2P0DP24 149 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 CALM3P0DP25 149 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 OAS2P29728 719 aaKnown RBP20.1■□□□□ 0.81
RTN4-204ENST00000357732 IL6STP40189 918 aaPredicted RBP20.1■□□□□ 0.81
RTN4-204ENST00000357732 SEC23AQ15436 765 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 RRP12Q5JTH9 1297 aaKnown RBP20.1■□□□□ 0.81
RTN4-204ENST00000357732 RAB21Q9UL25 225 aa20.1■□□□□ 0.81
RTN4-204ENST00000357732 LRRC10BA6NIK2 292 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 MAP2K7O14733 419 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 PPARAQ07869 468 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 PTPN21Q16825 1174 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 DZIP3Q86Y13 1208 aaKnown RBP20.09■□□□□ 0.81
RTN4-204ENST00000357732 TMTC1Q8IUR5 882 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 LCORLQ8N3X6 602 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 MSANTD4Q8NCY6 345 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 DESI2Q9BSY9 194 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 TOMM22Q9NS69 142 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 BCL9O00512 1426 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 NHSL1Q5SYE7 1610 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 ERICH4A6NGS2 130 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 SOWAHDA6NJG2 315 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 RBL2Q08999 1139 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 GRAMD1CQ8IYS0 662 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 OXER1Q8TDS5 423 aa20.09■□□□□ 0.81
RTN4-204ENST00000357732 ERLIN1O75477 346 aa20.08■□□□□ 0.81
RTN4-204ENST00000357732 TMED8Q6PL24 325 aaPredicted RBP20.08■□□□□ 0.81
RTN4-204ENST00000357732 RAD9BQ6WBX8 426 aa20.08■□□□□ 0.81
RTN4-204ENST00000357732 TSPYL1Q9H0U9 437 aa20.08■□□□□ 0.81
RTN4-204ENST00000357732 DISP2A7MBM2 1401 aa20.08■□□□□ 0.8
RTN4-204ENST00000357732 KARSQ15046 597 aaKnown RBP20.08■□□□□ 0.8
RTN4-204ENST00000357732 LONRF2Q1L5Z9 754 aa20.08■□□□□ 0.8
RTN4-204ENST00000357732 EXOC4Q96A65 974 aa20.08■□□□□ 0.8
RTN4-204ENST00000357732 LIMA1Q9UHB6 759 aaKnown RBP20.08■□□□□ 0.8
RTN4-204ENST00000357732 CTAGE9A4FU28 777 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 PPP1R3GB7ZBB8 358 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 TEX33O43247 280 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 TRAPPC10P48553 1259 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 USP49Q70CQ1 688 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 NUP133Q8WUM0 1156 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 TNKSO95271 1327 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 DLEC1Q9Y238 1755 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 WHAMMP3Q1A5X7 153 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 ANKRD20A12PQ8NF67 263 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 SYMPKQ92797 1274 aaKnown RBP20.07■□□□□ 0.8
RTN4-204ENST00000357732 ZKSCAN3Q9BRR0 538 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 GBP3Q9H0R5 595 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 SEC31BQ9NQW1 1179 aa20.07■□□□□ 0.8
RTN4-204ENST00000357732 ZNF335Q9H4Z2 1342 aaPredicted RBP20.06■□□□□ 0.8
RTN4-204ENST00000357732 SLIT2O94813 1529 aa20.06■□□□□ 0.8
RTN4-204ENST00000357732 TULP2O00295 520 aa20.06■□□□□ 0.8
RTN4-204ENST00000357732 PRKAB2O43741 272 aa20.06■□□□□ 0.8
RTN4-204ENST00000357732 PIP4K2BP78356 416 aa20.06■□□□□ 0.8
RTN4-204ENST00000357732 FUT2Q10981 343 aa20.06■□□□□ 0.8
RTN4-204ENST00000357732 PKN1Q16512 942 aa20.06■□□□□ 0.8
RTN4-204ENST00000357732 POLR3GO15318 223 aaPredicted RBP20.06■□□□□ 0.8
RTN4-204ENST00000357732 CD44P16070 742 aaKnown RBP20.06■□□□□ 0.8
RTN4-204ENST00000357732 MTF1Q14872 753 aa20.06■□□□□ 0.8
RTN4-204ENST00000357732 CATIPQ7Z7H3 387 aa20.06■□□□□ 0.8
RTN4-204ENST00000357732 IQUBQ8NA54 791 aa20.06■□□□□ 0.8
RTN4-204ENST00000357732 RWDD2AQ9UIY3 292 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms