RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 TNMDQ9H2S6 317 aa12.67□□□□□ -0.38
PSEN1-202ENST00000357710 GPCPD1Q9NPB8 672 aa12.67□□□□□ -0.38
PSEN1-202ENST00000357710 TUBA8Q9NY65 449 aaPredicted RBP12.67□□□□□ -0.38
PSEN1-202ENST00000357710 HDAC6Q9UBN7 1215 aa12.67□□□□□ -0.38
PSEN1-202ENST00000357710 SRRM3A6NNA2 597 aaPredicted RBP12.66□□□□□ -0.38
PSEN1-202ENST00000357710 ENOX2Q16206 610 aaKnown RBP12.66□□□□□ -0.38
PSEN1-202ENST00000357710 CCDC65Q8IXS2 484 aa12.66□□□□□ -0.38
PSEN1-202ENST00000357710 CAPS2Q9BXY5 557 aa12.66□□□□□ -0.38
PSEN1-202ENST00000357710 TMCO1Q9UM00 188 aa12.66□□□□□ -0.38
PSEN1-202ENST00000357710 C15orf41Q9Y2V0 281 aa12.66□□□□□ -0.38
PSEN1-202ENST00000357710 BIN1O00499 593 aa12.66□□□□□ -0.38
PSEN1-202ENST00000357710 SLC27A2O14975 620 aa12.66□□□□□ -0.38
PSEN1-202ENST00000357710 TPPPO94811 219 aa12.66□□□□□ -0.38
PSEN1-202ENST00000357710 IDO1P14902 403 aa12.66□□□□□ -0.38
PSEN1-202ENST00000357710 EVA1CP58658 441 aa12.66□□□□□ -0.38
PSEN1-202ENST00000357710 OTUD6AQ7L8S5 288 aa12.66□□□□□ -0.38
PSEN1-202ENST00000357710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.66□□□□□ -0.386e-6■□□□□ 8.9
PSEN1-202ENST00000357710 TPX2Q9ULW0 747 aaKnown RBP12.66□□□□□ -0.38
PSEN1-202ENST00000357710 TMEM232C9JQI7 657 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 GNAI3P08754 354 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 XBP1P17861 261 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 SFPQP23246 707 aaKnown RBP eCLIP12.65□□□□□ -0.38
PSEN1-202ENST00000357710 SRGAP1Q7Z6B7 1085 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 BRD8Q9H0E9 1235 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 CENPHQ9H3R5 247 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 PICK1Q9NRD5 415 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 STRN4Q9NRL3 753 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 SPG7Q9UQ90 795 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 ADAMTS7Q9UKP4 1686 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 CEMIPQ8WUJ3 1361 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 CHL1O00533 1208 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 TIMM44O43615 452 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 NPTXRO95502 500 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 LINGO3P0C6S8 592 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 SLC7A5Q01650 507 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 APBB1IPQ7Z5R6 666 aaPredicted RBP12.65□□□□□ -0.38
PSEN1-202ENST00000357710 FAM228AQ86W67 206 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 FUKQ8N0W3 1084 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 P3H4Q92791 437 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 KAT14Q9H8E8 782 aa12.65□□□□□ -0.38
PSEN1-202ENST00000357710 JCADQ9P266 1359 aa12.65□□□□□ -0.39
PSEN1-202ENST00000357710 RASSF10A6NK89 507 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 BECN2A8MW95 431 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 CYP27B1O15528 508 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 F13A1P00488 732 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 VIMP08670 466 aaKnown RBP12.64□□□□□ -0.39
PSEN1-202ENST00000357710 PSMC4P43686 418 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 ARID5BQ14865 1188 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 KRT72Q14CN4 511 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 TMC6Q7Z403 805 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 ARL10Q8N8L6 244 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 RASSF8Q8NHQ8 419 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 CLSTN2Q9H4D0 955 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 RETREG1Q9H6L5 497 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 TBC1D7Q9P0N9 293 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 ZFATQ9P243 1243 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 NRAPQ86VF7 1730 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
PSEN1-202ENST00000357710 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
PSEN1-202ENST00000357710 SMIM24O75264 130 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 SYF2O95926 243 aaKnown RBP12.64□□□□□ -0.39
PSEN1-202ENST00000357710 RPSAP08865 295 aaKnown RBP12.64□□□□□ -0.39
PSEN1-202ENST00000357710 SCNN1BP51168 640 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 CHMP4BP1P59074 171 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 ADCY1Q08828 1119 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 SOGA3Q5TF21 947 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 SMARCC2Q8TAQ2 1214 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 JAKMIP1Q96N16 626 aaKnown RBP12.64□□□□□ -0.39
PSEN1-202ENST00000357710 BTG4Q9NY30 223 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 ATXN10Q9UBB4 475 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 CIDEBQ9UHD4 219 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.64□□□□□ -0.39
PSEN1-202ENST00000357710 TNNQ9UQP3 1299 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 NWD2Q9ULI1 1742 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 GRIN2DO15399 1336 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 BUB1BO60566 1050 aaPredicted RBP12.64□□□□□ -0.39
PSEN1-202ENST00000357710 PDHBP11177 359 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 ALDH3A1P30838 453 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 INHBCP55103 352 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 IGSF22Q8N9C0 903 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 NSMCE1Q8WV22 266 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 CNKSR1Q969H4 720 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 IWS1Q96ST2 819 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 ANKZF1Q9H8Y5 726 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 ABCB6Q9NP58 842 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 BABAM1Q9NWV8 329 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 MYO1AQ9UBC5 1043 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 TSPYL4Q9UJ04 414 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 MAPK8IP1Q9UQF2 711 aa12.64□□□□□ -0.39
PSEN1-202ENST00000357710 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
PSEN1-202ENST00000357710 ATP4AP20648 1035 aa12.63□□□□□ -0.39
PSEN1-202ENST00000357710 HOXA10P31260 410 aaPredicted RBP12.63□□□□□ -0.39
PSEN1-202ENST00000357710 SKOR1P84550 965 aa12.63□□□□□ -0.39
PSEN1-202ENST00000357710 TMEM110Q86TL2 294 aa12.63□□□□□ -0.39
PSEN1-202ENST00000357710 KIRREL3Q8IZU9 778 aa12.63□□□□□ -0.39
PSEN1-202ENST00000357710 TBC1D31Q96DN5 1066 aa12.63□□□□□ -0.39
PSEN1-202ENST00000357710 MTRQ99707 1265 aa12.63□□□□□ -0.39
PSEN1-202ENST00000357710 PAIP2BQ9ULR5 123 aaKnown RBP12.63□□□□□ -0.39
PSEN1-202ENST00000357710 SH3BGRP55822 239 aaPredicted RBP12.63□□□□□ -0.39
PSEN1-202ENST00000357710 ZNF394Q53GI3 561 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms