RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 DTHD1Q6ZMT9 781 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 HDXQ7Z353 690 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 NBPF11Q86T75 865 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 ACRBPQ8NEB7 543 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 NELFBQ8WX92 580 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 WDR24Q96S15 920 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 LY9Q9HBG7 655 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 TFCP2L1Q9NZI6 479 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 MORC2Q9Y6X9 1032 aaPredicted RBP7.71□□□□□ -1.17
RTN4-203ENST00000357376 TSPY3P0CV98 308 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 TSPY8P0CW00 308 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 SPATA1Q5VX52 437 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 WWC2Q6AWC2 1192 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 LRRN4CLQ8ND94 238 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 PIGBQ92521 554 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 PSMB7Q99436 277 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 BPIFA3Q9BQP9 254 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 PARD6BQ9BYG5 372 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 PRDM4Q9UKN5 801 aa7.71□□□□□ -1.17
RTN4-203ENST00000357376 WDR17Q8IZU2 1322 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 USO1O60763 962 aaKnown RBP7.71□□□□□ -1.18
RTN4-203ENST00000357376 CALM1P0DP23 149 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 CALM2P0DP24 149 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 CALM3P0DP25 149 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 CYLC1P35663 651 aaPredicted RBP7.71□□□□□ -1.18
RTN4-203ENST00000357376 GRIN1Q05586 938 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 USP49Q70CQ1 688 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 SLC35F6Q8N357 371 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.71□□□□□ -1.184e-6■■□□□ 11.4
RTN4-203ENST00000357376 MMRN2Q9H8L6 949 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 TTF2Q9UNY4 1162 aaKnown RBP7.71□□□□□ -1.18
RTN4-203ENST00000357376 TEX33O43247 280 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 MYO1BO43795 1136 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 FMR1Q06787 632 aaKnown RBP eCLIP7.71□□□□□ -1.185e-11■□□□□ 8.4
RTN4-203ENST00000357376 DNAJC21Q5F1R6 531 aaKnown RBP7.71□□□□□ -1.18
RTN4-203ENST00000357376 CYP26C1Q6V0L0 522 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 FOXP1Q9H334 677 aaPredicted RBP7.71□□□□□ -1.18
RTN4-203ENST00000357376 RABEP2Q9H5N1 569 aa7.71□□□□□ -1.18
RTN4-203ENST00000357376 VGLL3A8MV65 326 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 ENC1O14682 589 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 KRT86O43790 486 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 NAPAP54920 295 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 DYNLL1P63167 89 aaKnown RBP7.7□□□□□ -1.18
RTN4-203ENST00000357376 LETM2Q2VYF4 491 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 CRACR2BQ8N4Y2 399 aaPredicted RBP7.7□□□□□ -1.18
RTN4-203ENST00000357376 ENOX1Q8TC92 643 aaKnown RBP7.7□□□□□ -1.18
RTN4-203ENST00000357376 RASGRP4Q8TDF6 673 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 GPKOWQ92917 476 aaPredicted RBP eCLIP7.7□□□□□ -1.18
RTN4-203ENST00000357376 ZSCAN10Q96SZ4 725 aaPredicted RBP7.7□□□□□ -1.18
RTN4-203ENST00000357376 PYM1Q9BRP8 204 aaKnown RBP7.7□□□□□ -1.18
RTN4-203ENST00000357376 RBM28Q9NW13 759 aaKnown RBP7.7□□□□□ -1.18
RTN4-203ENST00000357376 FAM205CA6NFA0 338 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 PTPREP23469 700 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 LIFRP42702 1097 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 TBC1D8BQ0IIM8 1120 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 LONRF2Q1L5Z9 754 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 TMTC1Q8IUR5 882 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 FERMT2Q96AC1 680 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 CCDC42Q96M95 316 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 ISCA1Q9BUE6 129 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.7□□□□□ -1.18
RTN4-203ENST00000357376 TSPYL1Q9H0U9 437 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 PDE11AQ9HCR9 933 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 KDM6AO15550 1401 aaPredicted RBP7.7□□□□□ -1.18
RTN4-203ENST00000357376 KCNJ18B7U540 433 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 PLEKHA8P1O95397 391 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 CALML3P27482 149 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 PAFAH1B1P43034 410 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 ARID5AQ03989 594 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 CHRNDQ07001 517 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 KIF5AQ12840 1032 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 MORC3Q14149 939 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 KCNJ12Q14500 433 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 FCHSD1Q86WN1 690 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 CSGALNACT2Q8N6G5 542 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 TRIML1Q8N9V2 468 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 CALML4Q96GE6 196 aa7.7□□□□□ -1.18
RTN4-203ENST00000357376 SOS2Q07890 1332 aaPredicted RBP7.69□□□□□ -1.18
RTN4-203ENST00000357376 ZSCAN26Q16670 478 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 NBPF5PQ86XG9 351 aaPredicted RBP7.69□□□□□ -1.18
RTN4-203ENST00000357376 UIMC1Q96RL1 719 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 ZPR1O75312 459 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 CASP7P55210 303 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 KRT83P78385 493 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 PPARDQ03181 441 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 CCDC40Q4G0X9 1142 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 RGS22Q8NE09 1264 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 RABGGTAQ92696 567 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 TMX4Q9H1E5 349 aaPredicted RBP7.69□□□□□ -1.18
RTN4-203ENST00000357376 SAP30BPQ9UHR5 308 aaKnown RBP7.69□□□□□ -1.18
RTN4-203ENST00000357376 SRPRBQ9Y5M8 271 aaKnown RBP7.69□□□□□ -1.18
RTN4-203ENST00000357376 SLFN14P0C7P3 912 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 MCM3P25205 808 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 ERCC5P28715 1186 aaPredicted RBP7.69□□□□□ -1.18
RTN4-203ENST00000357376 PDE4DQ08499 809 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 DDB1Q16531 1140 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 SRGAP1Q7Z6B7 1085 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 EHBP1Q8NDI1 1231 aa7.69□□□□□ -1.18
RTN4-203ENST00000357376 NAA15Q9BXJ9 866 aaKnown RBP7.69□□□□□ -1.18
RTN4-203ENST00000357376 UBA5Q9GZZ9 404 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms