RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 GSCP56915 257 aaPredicted RBP13.71□□□□□ -0.21
SMARCAL1-201ENST00000357276 RILPL1Q5EBL4 403 aa13.71□□□□□ -0.21
SMARCAL1-201ENST00000357276 NCAPH2Q6IBW4 605 aa13.71□□□□□ -0.21
SMARCAL1-201ENST00000357276 FOXP1Q9H334 677 aaPredicted RBP13.71□□□□□ -0.21
SMARCAL1-201ENST00000357276 RNF225M0QZC1 329 aaPredicted RBP13.71□□□□□ -0.22
SMARCAL1-201ENST00000357276 TRIM29Q14134 588 aa13.71□□□□□ -0.22
SMARCAL1-201ENST00000357276 CCDC148Q8NFR7 591 aa13.71□□□□□ -0.22
SMARCAL1-201ENST00000357276 MYCBPQ99417 103 aaPredicted RBP13.71□□□□□ -0.22
SMARCAL1-201ENST00000357276 LIMA1Q9UHB6 759 aaKnown RBP13.71□□□□□ -0.22
SMARCAL1-201ENST00000357276 REXO2Q9Y3B8 237 aaKnown RBP13.71□□□□□ -0.22
SMARCAL1-201ENST00000357276 EXOC5O00471 708 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 FKBP4Q02790 459 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 SCARF1Q14162 830 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 WASHC4Q2M389 1173 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 CYP26C1Q6V0L0 522 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 ZNF662Q6ZS27 426 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 STRN4Q9NRL3 753 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 MYH13Q9UKX3 1938 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 BTBD18B2RXH4 712 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 ZBTB43O43298 467 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 RXRAP19793 462 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 MMP14P50281 582 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 PAPD7Q5XG87 772 aaKnown RBP13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 CPLX3Q8WVH0 158 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 AXIN2Q9Y2T1 843 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 ANKRD65E5RJM6 399 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 IFNAR1P17181 557 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 LIFRP42702 1097 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 PIP4K2AP48426 406 aaPredicted RBP13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 MAP9Q49MG5 647 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 MCTP2Q6DN12 878 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 USP49Q70CQ1 688 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 PLEKHA4Q9H4M7 779 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 TBC1D2BQ9UPU7 963 aa13.7□□□□□ -0.22
SMARCAL1-201ENST00000357276 A0A087X0B3 334 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 PHKG2P15735 406 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 DPYDQ12882 1025 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 KAT2BQ92831 832 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 ZNF594Q96JF6 807 aaPredicted RBP13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 PUS3Q9BZE2 481 aaKnown RBP13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 PCDHB6Q9Y5E3 794 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 ADORA1P30542 326 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 NBPF14Q5TI25 921 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 XAGE2Q96GT9 111 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 RPGRIP1Q96KN7 1286 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 DRC1Q96MC2 740 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 AATFQ9NY61 560 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 UBR2Q8IWV8 1755 aa13.69□□□□□ -0.22
SMARCAL1-201ENST00000357276 TRIM14Q14142 442 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 MICU3Q86XE3 530 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 DIS3L2Q8IYB7 885 aaKnown RBP13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 GSDMAQ96QA5 445 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 CSRNP2Q9H175 543 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 DEF6Q9H4E7 631 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 ZAP70P43403 619 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 SSRP1Q08945 709 aaKnown RBP13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 FILIP1LQ4L180 1135 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 TEX2Q8IWB9 1127 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 WASF1Q92558 559 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 GOLGA8AA7E2F4 631 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 GUCY1A2P33402 732 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 GGCXP38435 758 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 STIM1Q13586 685 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 PAGE5Q96GU1 130 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 MMS19Q96T76 1030 aa13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 CWC25Q9NXE8 425 aaPredicted RBP13.68□□□□□ -0.22
SMARCAL1-201ENST00000357276 GRIN2DO15399 1336 aa13.67□□□□□ -0.22
SMARCAL1-201ENST00000357276 ATXN2Q99700 1313 aaKnown RBP13.67□□□□□ -0.22
SMARCAL1-201ENST00000357276 ADD2P35612 726 aa13.67□□□□□ -0.22
SMARCAL1-201ENST00000357276 IRAK1P51617 712 aa13.67□□□□□ -0.22
SMARCAL1-201ENST00000357276 KRT31Q15323 416 aa13.67□□□□□ -0.22
SMARCAL1-201ENST00000357276 COL14A1Q05707 1796 aaKnown RBP13.67□□□□□ -0.22
SMARCAL1-201ENST00000357276 HSP90AB3PQ58FF7 597 aa13.67□□□□□ -0.22
SMARCAL1-201ENST00000357276 KAT14Q9H8E8 782 aa13.67□□□□□ -0.22
SMARCAL1-201ENST00000357276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■□□□□ 9.8
SMARCAL1-201ENST00000357276 MYH6P13533 1939 aa13.67□□□□□ -0.22
SMARCAL1-201ENST00000357276 LOC102724159A0A0B4J2E5 919 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 PWP2Q15269 919 aaKnown RBP13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 LMOD2Q6P5Q4 547 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 CCNI2Q6ZMN8 369 aaPredicted RBP13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 RIN2Q8WYP3 895 aaPredicted RBP13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 DDX17Q92841 729 aaKnown RBP13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 SLC26A6Q9BXS9 759 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 HAUS4Q9H6D7 363 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 CEP126Q9P2H0 1117 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 NBPF26B4DH59 902 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 B4E1Z4 1266 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 NDUFA10O95299 355 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 NBPF10Q6P3W6 841 aaKnown RBP13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 NBPF15Q8N660 670 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 SH3GL2Q99962 352 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 SLF1Q9BQI6 1058 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 CEP131Q9UPN4 1083 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 MYBL2P10244 700 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 STX17P56962 302 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 SF3B2Q13435 895 aaKnown RBP13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 ALX1Q15699 326 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 KCNV1Q6PIU1 500 aa13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms