RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 SMARCA4P51532 1647 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 STXBP3O00186 592 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 NR1I2O75469 434 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 STX2P32856 288 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 PPP1R2P41236 205 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 PPP1R2P3Q6NXS1 205 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 KLHL29Q96CT2 875 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 KCNA3P22001 575 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 SCNN1BP51168 640 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 CHST3Q7LGC8 479 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.54□□□□□ -1.2
NF1-201ENST00000356175 OTUD7AQ8TE49 926 aaPredicted RBP7.54□□□□□ -1.2
NF1-201ENST00000356175 SEPT8Q92599 483 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 RBMX2Q9Y388 322 aaKnown RBP7.54□□□□□ -1.2
NF1-201ENST00000356175 ARPP19P56211 112 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 PAK2Q13177 524 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 CC2D1AQ6P1N0 951 aaPredicted RBP7.54□□□□□ -1.2
NF1-201ENST00000356175 RIC3Q7Z5B4 369 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 KLHL25Q9H0H3 589 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 CLSTN2Q9H4D0 955 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 TNNC1P63316 161 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 TAF12Q16514 161 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 HS2ST1Q7LGA3 356 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 FANCLQ9NW38 375 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 TUFMP49411 452 aaKnown RBP7.54□□□□□ -1.2
NF1-201ENST00000356175 BMP2KLQ5H9B9 411 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 BEND6Q5SZJ8 279 aaPredicted RBP7.54□□□□□ -1.2
NF1-201ENST00000356175 MICU3Q86XE3 530 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 RABGGTAQ92696 567 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 BRF1Q92994 677 aa7.54□□□□□ -1.2
NF1-201ENST00000356175 ADCY3O60266 1144 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 LMNB1P20700 586 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 SCRN1Q12765 414 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 HNRNPCL2B2RXH8 293 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 I3L4J1 428 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 HNRNPCL1O60812 293 aaKnown RBP7.53□□□□□ -1.2
NF1-201ENST00000356175 C3orf20Q8ND61 904 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 RILPQ96NA2 401 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 VPS16Q9H269 839 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 TRIM25Q14258 630 aaKnown RBP7.53□□□□□ -1.2
NF1-201ENST00000356175 CWF19L2Q2TBE0 894 aaKnown RBP7.53□□□□□ -1.2
NF1-201ENST00000356175 UNC45AQ9H3U1 944 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 SH3BP1Q9Y3L3 701 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
NF1-201ENST00000356175 GUCY2DQ02846 1103 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 CCDC13Q8IYE1 715 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 SH3GL2Q99962 352 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 KAT14Q9H8E8 782 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 MINK1Q8N4C8 1332 aaPredicted RBP7.53□□□□□ -1.2
NF1-201ENST00000356175 SLC4A2P04920 1241 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 USP4Q13107 963 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 IFI16Q16666 785 aaKnown RBP7.53□□□□□ -1.2
NF1-201ENST00000356175 TWISTNBQ3B726 338 aaPredicted RBP7.53□□□□□ -1.2
NF1-201ENST00000356175 CCDC102BQ68D86 513 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 RPGRIP1LQ68CZ1 1315 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 ITGB3BPQ13352 177 aaPredicted RBP7.53□□□□□ -1.2
NF1-201ENST00000356175 TTC39AQ5SRH9 613 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 CDC37L1Q7L3B6 337 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 TBATAQ96M53 351 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 KLHL14Q9P2G3 628 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 SKIP12755 728 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 SLC4A8Q2Y0W8 1093 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 NR1H4Q96RI1 486 aaPredicted RBP7.53□□□□□ -1.2
NF1-201ENST00000356175 DNAJC17Q9NVM6 304 aaKnown RBP7.53□□□□□ -1.2
NF1-201ENST00000356175 PEX14O75381 377 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 CHGBP05060 677 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 STAMBPL1Q96FJ0 436 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 BOLA2Q9H3K6 86 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 MYSM1Q5VVJ2 828 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 ZMYM3Q14202 1370 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 CCDC151A5D8V7 595 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 PSMD7P51665 324 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 LRRC36Q1X8D7 754 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 TOGARAM2Q6ZUX3 1019 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 TEKT1Q969V4 418 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 DPH5Q9H2P9 285 aa7.53□□□□□ -1.2
NF1-201ENST00000356175 FAM135AQ9P2D6 1515 aa7.52□□□□□ -1.2
NF1-201ENST00000356175 HNRNPRO43390 633 aaKnown RBP7.52□□□□□ -1.2
NF1-201ENST00000356175 CTNND1O60716 968 aaKnown RBP7.52□□□□□ -1.2
NF1-201ENST00000356175 UBE3AQ05086 875 aa7.52□□□□□ -1.2
NF1-201ENST00000356175 KCNF1Q9H3M0 494 aa7.52□□□□□ -1.2
NF1-201ENST00000356175 SLC40A1Q9NP59 571 aa7.52□□□□□ -1.2
NF1-201ENST00000356175 KRT82Q9NSB4 513 aa7.52□□□□□ -1.2
NF1-201ENST00000356175 NR1D1P20393 614 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 GRK2P25098 689 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 PNOCQ13519 176 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 MPHOSPH8Q99549 860 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 SYNCQ9H7C4 482 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 SNX1Q13596 522 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 NSMCE1Q8WV22 266 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 FBXO9Q9UK97 447 aaPredicted RBP7.52□□□□□ -1.21
NF1-201ENST00000356175 RAP1GDS1P52306 607 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 CCDC93Q567U6 631 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 USP26Q9BXU7 913 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 PRKAR2BP31323 418 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 KBTBD12Q3ZCT8 623 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 CATSPER3Q86XQ3 398 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 ASZ1Q8WWH4 475 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 RAPGEF5Q92565 580 aa7.52□□□□□ -1.21
NF1-201ENST00000356175 RPGRQ92834 1020 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms