RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 CCDC88AQ3V6T2 1871 aa9.32□□□□□ -0.92
COMMD9-202ENST00000355500 GPAA1O43292 621 aa9.32□□□□□ -0.92
COMMD9-202ENST00000355500 CCDC15Q0P6D6 951 aa9.32□□□□□ -0.92
COMMD9-202ENST00000355500 SCRN1Q12765 414 aa9.32□□□□□ -0.92
COMMD9-202ENST00000355500 FUCA2Q9BTY2 467 aa9.32□□□□□ -0.92
COMMD9-202ENST00000355500 CNPY2Q9Y2B0 182 aa9.32□□□□□ -0.92
COMMD9-202ENST00000355500 TAF6LQ9Y6J9 622 aa9.32□□□□□ -0.92
COMMD9-202ENST00000355500 MORC2Q9Y6X9 1032 aaPredicted RBP9.32□□□□□ -0.92
COMMD9-202ENST00000355500 STK36Q9NRP7 1315 aa9.32□□□□□ -0.92
COMMD9-202ENST00000355500 KLRG2A4D1S0 409 aaPredicted RBP9.31□□□□□ -0.92
COMMD9-202ENST00000355500 GPTP24298 496 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 MAP3K12Q12852 859 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 DALRD3Q5D0E6 543 aaKnown RBP9.31□□□□□ -0.92
COMMD9-202ENST00000355500 AMIGO3Q86WK7 504 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 SPATA5Q8NB90 893 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 BICDL2A1A5D9 508 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 CDKL5O76039 1030 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 PDE6AP16499 860 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 PDIA3P30101 505 aaKnown RBP9.31□□□□□ -0.92
COMMD9-202ENST00000355500 FKBP4Q02790 459 aaKnown RBP eCLIP9.31□□□□□ -0.92
COMMD9-202ENST00000355500 SCARF1Q14162 830 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 STYK1Q6J9G0 422 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 CDC37L1Q7L3B6 337 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 SGMS1Q86VZ5 419 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 VPS37AQ8NEZ2 397 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 MPHOSPH8Q99549 860 aa9.31□□□□□ -0.92
COMMD9-202ENST00000355500 ZNF213O14771 459 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 FGAP02671 866 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 LDHCP07864 332 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 LIFRP42702 1097 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 RASSF7Q02833 373 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 PPP2R5BQ15173 497 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 BRAPQ7Z569 592 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 NT5DC4Q86YG4 428 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 NECAB1Q8N987 351 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 BRF1Q92994 677 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 PANK2Q9BZ23 570 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 RBSNQ9H1K0 784 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 VPS33BQ9H267 617 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 TRIM66O15016 1216 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 HIP1RO75146 1068 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 TNNT1P13805 278 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 INHBEP58166 350 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 TTC39BQ5VTQ0 682 aaPredicted RBP9.3□□□□□ -0.92
COMMD9-202ENST00000355500 LRCH2Q5VUJ6 765 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 KANK3Q6NY19 840 aa9.3□□□□□ -0.92
COMMD9-202ENST00000355500 UHMK1Q8TAS1 419 aaKnown RBP9.3□□□□□ -0.92
COMMD9-202ENST00000355500 STRBPQ96SI9 672 aaKnown RBP9.3□□□□□ -0.92
COMMD9-202ENST00000355500 VPS37CA5D8V6 355 aaPredicted RBP9.29□□□□□ -0.92
COMMD9-202ENST00000355500 KIF1CO43896 1103 aaKnown RBP9.29□□□□□ -0.92
COMMD9-202ENST00000355500 USP5P45974 858 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 DNM1Q05193 864 aaKnown RBP9.29□□□□□ -0.92
COMMD9-202ENST00000355500 STAG1Q8WVM7 1258 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 CEP63Q96MT8 703 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 KRT23Q9C075 422 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 PUS7LQ9H0K6 701 aaKnown RBP9.29□□□□□ -0.92
COMMD9-202ENST00000355500 PIH1D3Q9NQM4 214 aaKnown RBP9.29□□□□□ -0.92
COMMD9-202ENST00000355500 RCOR1Q9UKL0 485 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 NSFL1CQ9UNZ2 370 aaKnown RBP9.29□□□□□ -0.92
COMMD9-202ENST00000355500 NIP7Q9Y221 180 aaKnown RBP eCLIP9.29□□□□□ -0.92
COMMD9-202ENST00000355500 SYCE3A1L190 88 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 PTPDC1A2A3K4 754 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 GADD45BO75293 160 aaPredicted RBP9.29□□□□□ -0.92
COMMD9-202ENST00000355500 CTDNEP1O95476 244 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 TRDNQ13061 729 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 WASHC4Q2M389 1173 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 CCDC92Q53HC0 331 aaPredicted RBP9.29□□□□□ -0.92
COMMD9-202ENST00000355500 RALYLQ86SE5 291 aaKnown RBP9.29□□□□□ -0.92
COMMD9-202ENST00000355500 DNAJC5GQ8N7S2 189 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 DHX38Q92620 1227 aaKnown RBP9.29□□□□□ -0.92
COMMD9-202ENST00000355500 BRIP1Q9BX63 1249 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 ANKRD2Q9GZV1 360 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 SCINQ9Y6U3 715 aa9.29□□□□□ -0.92
COMMD9-202ENST00000355500 ZNF532Q9HCE3 1301 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 DPEP1P16444 411 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 PHKA1P46020 1223 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 TCEAL1Q15170 157 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 SLC9C2Q5TAH2 1124 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 C15orf52Q6ZUT6 534 aaKnown RBP9.28□□□□□ -0.92
COMMD9-202ENST00000355500 IQCF2Q8IXL9 164 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 LEO1Q8WVC0 666 aaPredicted RBP9.28□□□□□ -0.92
COMMD9-202ENST00000355500 IFT122Q9HBG6 1241 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 CHCHD3Q9NX63 227 aaKnown RBP9.28□□□□□ -0.92
COMMD9-202ENST00000355500 ANGEL1Q9UNK9 670 aaKnown RBP9.28□□□□□ -0.92
COMMD9-202ENST00000355500 TMA7Q9Y2S6 64 aaKnown RBP9.28□□□□□ -0.92
COMMD9-202ENST00000355500 NDUFB9Q9Y6M9 179 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 SH2B2O14492 632 aaPredicted RBP9.28□□□□□ -0.92
COMMD9-202ENST00000355500 PRC1O43663 620 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 ZPR1O75312 459 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 TBC1D10BQ4KMP7 808 aaPredicted RBP9.28□□□□□ -0.92
COMMD9-202ENST00000355500 TTC6Q86TZ1 520 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 FMNL3Q8IVF7 1028 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 SMC1BQ8NDV3 1235 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 DDX27Q96GQ7 796 aaKnown RBP9.28□□□□□ -0.92
COMMD9-202ENST00000355500 NACAP1Q9BZK3 213 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 RNF41Q9H4P4 317 aaPredicted RBP9.28□□□□□ -0.92
COMMD9-202ENST00000355500 PIF1Q9H611 641 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 CCDC39Q9UFE4 941 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 USP25Q9UHP3 1055 aa9.28□□□□□ -0.92
COMMD9-202ENST00000355500 DENND2AQ9ULE3 1009 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms