RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 STIM2Q9P246 746 aa20.02■□□□□ 0.8
COL18A1-202ENST00000355480 NEURL1BA8MQ27 555 aa20.02■□□□□ 0.8
COL18A1-202ENST00000355480 LPXNO60711 386 aa20.02■□□□□ 0.8
COL18A1-202ENST00000355480 HSPA1LP34931 641 aa20.02■□□□□ 0.8
COL18A1-202ENST00000355480 MICALL1Q8N3F8 863 aa20.02■□□□□ 0.8
COL18A1-202ENST00000355480 SMCO2A6NFE2 343 aa20.02■□□□□ 0.8
COL18A1-202ENST00000355480 E7EWF7 191 aa20.02■□□□□ 0.8
COL18A1-202ENST00000355480 GAS7O60861 476 aa20.02■□□□□ 0.8
COL18A1-202ENST00000355480 VIMP08670 466 aaKnown RBP20.02■□□□□ 0.8
COL18A1-202ENST00000355480 NELFBQ8WX92 580 aa20.02■□□□□ 0.8
COL18A1-202ENST00000355480 NLRP12P59046 1061 aa20.02■□□□□ 0.79
COL18A1-202ENST00000355480 INTS8Q75QN2 995 aaKnown RBP20.02■□□□□ 0.79
COL18A1-202ENST00000355480 TRIM31Q9BZY9 425 aa20.02■□□□□ 0.79
COL18A1-202ENST00000355480 RFX1P22670 979 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 HS1BP3Q53T59 392 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 NSMCE1Q8WV22 266 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 HPDP32754 393 aaPredicted RBP20.01■□□□□ 0.79
COL18A1-202ENST00000355480 TNNI1P19237 187 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 OTUD6AQ7L8S5 288 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 DAAM2Q86T65 1068 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 CCDC110Q8TBZ0 833 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 BLZF1Q9H2G9 400 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 MIER3Q7Z3K6 550 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 STAMQ92783 540 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 DSCC1Q9BVC3 393 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 ASIC3Q9UHC3 531 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 TESPA1A2RU30 521 aaPredicted RBP20.01■□□□□ 0.79
COL18A1-202ENST00000355480 USP17L12C9JPN9 530 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 USP17L21D6R901 530 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 KLHL30Q0D2K2 578 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 HACE1Q8IYU2 909 aa20.01■□□□□ 0.79
COL18A1-202ENST00000355480 ZWINTO95229 277 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 SPC25Q9HBM1 224 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20■□□□□ 0.793e-10■■■□□ 17.8
COL18A1-202ENST00000355480 NFE2L3Q9Y4A8 694 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 CARD10Q9BWT7 1032 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 GNPTABQ3T906 1256 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 MLXIPQ9HAP2 919 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 SLC5A4Q9NY91 659 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 ATP5JP18859 108 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 MAGEA1P43355 309 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 DEPTORQ8TB45 409 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 NT5C3AQ9H0P0 336 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 LONRF3Q496Y0 759 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 ARHGEF16Q5VV41 709 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 VPS52Q8N1B4 723 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 METTL13Q8N6R0 699 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 RDH13Q8NBN7 331 aa20■□□□□ 0.79
COL18A1-202ENST00000355480 MKRN1Q9UHC7 482 aaKnown RBP20■□□□□ 0.79
COL18A1-202ENST00000355480 CEP104O60308 925 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 JAK2O60674 1132 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 FAM47CQ5HY64 1035 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 GIPC1O14908 333 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 FLOT1O75955 427 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 GPR162Q16538 588 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 CDC37L1Q7L3B6 337 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 ARHGAP44Q17R89 818 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 CEP57Q86XR8 500 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 ATP8A2Q9NTI2 1148 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 FAM184BQ9ULE4 1060 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 TTLL3Q9Y4R7 772 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 DTNBO60941 627 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 ZNF654Q8IZM8 581 aa19.99■□□□□ 0.79
COL18A1-202ENST00000355480 RIOK1Q9BRS2 568 aaKnown RBP19.98■□□□□ 0.79
COL18A1-202ENST00000355480 KCNG1Q9UIX4 513 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 ALAS1P13196 640 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 P4HA1P13674 534 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 MYO1AQ9UBC5 1043 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 TCP10L2B9ZVM9 353 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 GYG1P46976 350 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 FYB2Q5VWT5 728 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 SFMBT2Q5VUG0 894 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 FAM102BQ5T8I3 360 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 TMTC1Q8IUR5 882 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 CBX8Q9HC52 389 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 TRPC6Q9Y210 931 aa19.98■□□□□ 0.79
COL18A1-202ENST00000355480 PER1O15534 1290 aaPredicted RBP19.97■□□□□ 0.79
COL18A1-202ENST00000355480 LRMPQ12912 555 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 BIRC2Q13490 618 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 FRMPD2Q68DX3 1309 aaPredicted RBP19.97■□□□□ 0.79
COL18A1-202ENST00000355480 SCNN1DP51172 638 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 C2CD5Q86YS7 1000 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 EDC3Q96F86 508 aaKnown RBP19.97■□□□□ 0.79
COL18A1-202ENST00000355480 KDM3AQ9Y4C1 1321 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 CIB2O75838 187 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 ATP2B4P23634 1241 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 DOK7Q18PE1 504 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 CASC4Q6P4E1 433 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 IFT20Q8IY31 132 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 PCDHB13Q9Y5F0 798 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 KDM2BQ8NHM5 1336 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 TUBB2AQ13885 445 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 RNF169Q8NCN4 708 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 FLAD1Q8NFF5 587 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 ZSCAN10Q96SZ4 725 aaPredicted RBP19.97■□□□□ 0.79
COL18A1-202ENST00000355480 TUBB2BQ9BVA1 445 aa19.97■□□□□ 0.79
COL18A1-202ENST00000355480 ATP10AO60312 1499 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 PPP2R5CQ13362 524 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 DPY19L2Q6NUT2 758 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 KIAA0825Q8IV33 1275 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms