RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 NOVP48745 357 aa23.56■■□□□ 1.36
SIGMAR1-202ENST00000353468 TMEM179Q6ZVK1 233 aa23.56■■□□□ 1.36
SIGMAR1-202ENST00000353468 USP48Q86UV5 1035 aa23.56■■□□□ 1.36
SIGMAR1-202ENST00000353468 GOLGA8BA8MQT2 603 aa23.55■■□□□ 1.36
SIGMAR1-202ENST00000353468 PHF20L1A8MW92 1017 aa23.55■■□□□ 1.36
SIGMAR1-202ENST00000353468 ZBTB43O43298 467 aa23.55■■□□□ 1.36
SIGMAR1-202ENST00000353468 ST3GAL1Q11201 340 aa23.55■■□□□ 1.36
SIGMAR1-202ENST00000353468 SHROOM1Q2M3G4 852 aaPredicted RBP23.55■■□□□ 1.36
SIGMAR1-202ENST00000353468 ZNF654Q8IZM8 581 aa23.55■■□□□ 1.36
SIGMAR1-202ENST00000353468 GTF3C6Q969F1 213 aa23.55■■□□□ 1.36
SIGMAR1-202ENST00000353468 ZNF341Q9BYN7 854 aa23.55■■□□□ 1.36
SIGMAR1-202ENST00000353468 HPS5Q9UPZ3 1129 aa23.55■■□□□ 1.36
SIGMAR1-202ENST00000353468 GH2P01242 217 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 POTEIP0CG38 1075 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 POTEJP0CG39 1038 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 CAP2P40123 477 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 CCT2P78371 535 aaKnown RBP23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 JAG1P78504 1218 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 SCRN1Q12765 414 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 PPP4R3BQ5MIZ7 849 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 DLK2Q6UY11 383 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 CDC37L1Q7L3B6 337 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 CATIPQ7Z7H3 387 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 RAB11FIP4Q86YS3 637 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 ZNF526Q8TF50 670 aaPredicted RBP23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 TMEM47Q9BQJ4 181 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 KAT14Q9H8E8 782 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 KANSL2Q9H9L4 492 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 NMRK2Q9NPI5 230 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 FOXD4L1Q9NU39 408 aa23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 GREB1LQ9C091 1923 aaPredicted RBP23.54■■□□□ 1.36
SIGMAR1-202ENST00000353468 TTLL1O95922 423 aa23.53■■□□□ 1.36
SIGMAR1-202ENST00000353468 GUCY1A2P33402 732 aa23.53■■□□□ 1.36
SIGMAR1-202ENST00000353468 SEPT2Q15019 361 aa23.53■■□□□ 1.36
SIGMAR1-202ENST00000353468 MICU3Q86XE3 530 aa23.53■■□□□ 1.36
SIGMAR1-202ENST00000353468 INTS4Q96HW7 963 aaKnown RBP23.53■■□□□ 1.36
SIGMAR1-202ENST00000353468 MYL10Q9BUA6 226 aa23.53■■□□□ 1.36
SIGMAR1-202ENST00000353468 RXRAP19793 462 aa23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 METAP2P50579 478 aaKnown RBP eCLIP23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 RCAN1P53805 252 aa23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 CLEC10AQ8IUN9 316 aa23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 GLIS2Q9BZE0 524 aaPredicted RBP23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 TOP1P11387 765 aaKnown RBP23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 RAB3GAP1Q15042 981 aa23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 PNMA1Q8ND90 353 aa23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 NUP133Q8WUM0 1156 aa23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 CLIP2Q9UDT6 1046 aa23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 ZNF112Q9UJU3 913 aa23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 ZBTB21Q9ULJ3 1066 aa23.52■■□□□ 1.36
SIGMAR1-202ENST00000353468 GOLGA8AA7E2F4 631 aa23.51■■□□□ 1.35
SIGMAR1-202ENST00000353468 DDAH1O94760 285 aa23.51■■□□□ 1.35
SIGMAR1-202ENST00000353468 TROAPQ12815 778 aa23.51■■□□□ 1.35
SIGMAR1-202ENST00000353468 CHMP4CQ96CF2 233 aa23.51■■□□□ 1.35
SIGMAR1-202ENST00000353468 NCOA5Q9HCD5 579 aaKnown RBP23.51■■□□□ 1.35
SIGMAR1-202ENST00000353468 NYAP2Q9P242 653 aa23.51■■□□□ 1.35
SIGMAR1-202ENST00000353468 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.51■■□□□ 1.35
SIGMAR1-202ENST00000353468 SSC5DA1L4H1 1573 aa23.51■■□□□ 1.35
SIGMAR1-202ENST00000353468 CTNND1O60716 968 aaKnown RBP23.5■■□□□ 1.35
SIGMAR1-202ENST00000353468 ASNSP08243 561 aa23.5■■□□□ 1.35
SIGMAR1-202ENST00000353468 CALM1P0DP23 149 aa23.5■■□□□ 1.35
SIGMAR1-202ENST00000353468 CALM2P0DP24 149 aa23.5■■□□□ 1.35
SIGMAR1-202ENST00000353468 CALM3P0DP25 149 aa23.5■■□□□ 1.35
SIGMAR1-202ENST00000353468 ICA1Q05084 483 aa23.5■■□□□ 1.35
SIGMAR1-202ENST00000353468 LDHDQ86WU2 507 aa23.5■■□□□ 1.35
SIGMAR1-202ENST00000353468 CCDC144CPQ8IYA2 1237 aa23.5■■□□□ 1.35
SIGMAR1-202ENST00000353468 CDCA5Q96FF9 252 aa23.5■■□□□ 1.35
SIGMAR1-202ENST00000353468 EEF2P13639 858 aaKnown RBP23.49■■□□□ 1.35
SIGMAR1-202ENST00000353468 ATP2B2Q01814 1243 aa23.49■■□□□ 1.35
SIGMAR1-202ENST00000353468 FANCBQ8NB91 859 aa23.49■■□□□ 1.35
SIGMAR1-202ENST00000353468 GINM1Q9NU53 330 aa23.49■■□□□ 1.35
SIGMAR1-202ENST00000353468 NID2Q14112 1375 aa23.49■■□□□ 1.35
SIGMAR1-202ENST00000353468 DHX16O60231 1041 aaKnown RBP23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 USP2O75604 605 aaPredicted RBP23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 CDC27P30260 824 aa23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 RTN1Q16799 776 aa23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 MAP1SQ66K74 1059 aaPredicted RBP23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 SIAH1Q8IUQ4 282 aa23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 MKL1Q969V6 931 aa23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 KLRG1Q96E93 195 aa23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 WRNIP1Q96S55 665 aa23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 FAM217BQ9NTX9 383 aaPredicted RBP23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 FZD1Q9UP38 647 aa23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 PPP1R12BO60237 982 aaPredicted RBP23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 INPP5BP32019 993 aa23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 NF2P35240 595 aa23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 ADD1P35611 737 aaKnown RBP23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 PPP2R5BQ15173 497 aa23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 LLPHQ9BRT6 129 aaKnown RBP23.48■■□□□ 1.35
SIGMAR1-202ENST00000353468 PRKG1Q13976 671 aa23.47■■□□□ 1.35
SIGMAR1-202ENST00000353468 LRRC47Q8N1G4 583 aaKnown RBP23.47■■□□□ 1.35
SIGMAR1-202ENST00000353468 MAP3K14Q99558 947 aa23.47■■□□□ 1.35
SIGMAR1-202ENST00000353468 CWC22Q9HCG8 908 aaKnown RBP23.47■■□□□ 1.35
SIGMAR1-202ENST00000353468 SMC3Q9UQE7 1217 aa23.47■■□□□ 1.35
SIGMAR1-202ENST00000353468 CCDC196A0A1B0GTZ2 297 aa23.46■■□□□ 1.35
SIGMAR1-202ENST00000353468 CPLX1O14810 134 aa23.46■■□□□ 1.35
SIGMAR1-202ENST00000353468 CTDNEP1O95476 244 aa23.46■■□□□ 1.35
SIGMAR1-202ENST00000353468 MYH4Q9Y623 1939 aa23.45■■□□□ 1.34
SIGMAR1-202ENST00000353468 SCYL3Q8IZE3 742 aa23.45■■□□□ 1.34
SIGMAR1-202ENST00000353468 CTCFLQ8NI51 663 aaPredicted RBP23.45■■□□□ 1.34
SIGMAR1-202ENST00000353468 RBM28Q9NW13 759 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms