RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 CCDC186Q7Z3E2 898 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 GABPB2Q8TAK5 448 aaPredicted RBP12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 NSMCE1Q8WV22 266 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 MRPL44Q9H9J2 332 aaKnown RBP12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 CCPG1Q9ULG6 757 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 ERBB3P21860 1342 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 KDM3AQ9Y4C1 1321 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 H0YCG3 227 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 CIAPIN1Q6FI81 312 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 CABP7Q86V35 215 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 ZSCAN10Q96SZ4 725 aaPredicted RBP12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 HAUS7Q99871 368 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 TUBB4AP04350 444 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 PCP11498 1178 aaKnown RBP12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 NPR1P16066 1061 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 CALCOCO2Q13137 446 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 KRT26Q7Z3Y9 468 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 LRRC47Q8N1G4 583 aaKnown RBP12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 AP5M1Q9H0R1 490 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 DNAI1Q9UI46 699 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 CTNND2Q9UQB3 1225 aa12.52□□□□□ -0.41
SLC6A20-201ENST00000353278 TMEM232C9JQI7 657 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 MMP10P09238 476 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 CCDC114Q96M63 670 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 RIOK1Q9BRS2 568 aaKnown RBP12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 USP44Q9H0E7 712 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 MTRF1LQ9UGC7 380 aaKnown RBP12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 SWAP70Q9UH65 585 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 PAXBP1Q9Y5B6 917 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 AFF2P51816 1311 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 KDM5DQ9BY66 1539 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 E7EWF7 191 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 STK10O94804 968 aaKnown RBP12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 PPP1R7Q15435 360 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 SDR42E1Q8WUS8 393 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 IREB2P48200 963 aaKnown RBP12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 GUCA1BQ9UMX6 200 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 KIF24Q5T7B8 1368 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 KLRF2D3W0D1 207 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 KMT5BQ4FZB7 885 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 DYMQ7RTS9 669 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 NRBP2Q9NSY0 501 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 RTEL1Q9NZ71 1219 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 VPS54Q9P1Q0 977 aa12.51□□□□□ -0.41
SLC6A20-201ENST00000353278 E7EVH7 732 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 POLR2DO15514 142 aaKnown RBP12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 RAD17O75943 681 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 CFAP58Q5T655 872 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 IFNKQ9P0W0 207 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 PIM2Q9P1W9 311 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 ERVV-1B6SEH8 477 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 FOSP01100 380 aaPredicted RBP12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 TNNI1P19237 187 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 RBM6P78332 1123 aaKnown RBP12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 FAM160B1Q5W0V3 765 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 BRINP3Q76B58 766 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 STIM2Q9P246 746 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 ADD3Q9UEY8 706 aaKnown RBP12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 CD2APQ9Y5K6 639 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 AATKQ6ZMQ8 1374 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 TRIM14Q14142 442 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 LRRC24Q50LG9 513 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 BEND3Q5T5X7 828 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 TSGA10Q9BZW7 698 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 FRMPD2Q68DX3 1309 aaPredicted RBP12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 hCG_1642624A0A1W2PR95 340 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 YARSP54577 528 aaKnown RBP12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 TNNC1P63316 161 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 RASA3Q14644 834 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 DCUN1D2Q6PH85 259 aa12.5□□□□□ -0.41
SLC6A20-201ENST00000353278 ERCC5P28715 1186 aaPredicted RBP12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 XKR9Q5GH70 373 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 RNF187Q5TA31 235 aaPredicted RBP12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 UIMC1Q96RL1 719 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 NAP1L3Q99457 506 aaPredicted RBP12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 KCNJ14Q9UNX9 436 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 PCDHB13Q9Y5F0 798 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 BCRP11274 1271 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 CALRP27797 417 aaKnown RBP12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 RAD51AP2Q09MP3 1159 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 PAK1Q13153 545 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 UBE3CQ15386 1083 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 PRR16Q569H4 304 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 GPATCH4Q5T3I0 446 aaKnown RBP12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 PPP1R9BQ96SB3 815 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 PAIP2Q9BPZ3 127 aaKnown RBP12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 ODF2LQ9ULJ1 636 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 PALLDQ8WX93 1383 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 TNKSO95271 1327 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 KCNQ4P56696 695 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 SLFN12Q8IYM2 578 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 CEP63Q96MT8 703 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 TEKT3Q9BXF9 490 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 SUGCTQ9HAC7 445 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 COPRSQ9NQ92 184 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms