RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 MRPL44Q9H9J2 332 aaKnown RBP27.94■■■□□ 2.06
CPNE1-202ENST00000352393 ZNF335Q9H4Z2 1342 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-202ENST00000352393 PBX1P40424 430 aa27.94■■■□□ 2.06
CPNE1-202ENST00000352393 FUT2Q10981 343 aa27.94■■■□□ 2.06
CPNE1-202ENST00000352393 A0A1B0GUL6 1792 aa27.93■■■□□ 2.06
CPNE1-202ENST00000352393 CD44P16070 742 aaKnown RBP27.93■■■□□ 2.06
CPNE1-202ENST00000352393 CDKAL1Q5VV42 579 aa27.93■■■□□ 2.06
CPNE1-202ENST00000352393 ESR2Q92731 530 aa27.93■■■□□ 2.06
CPNE1-202ENST00000352393 CCDC34Q96HJ3 373 aa27.93■■■□□ 2.06
CPNE1-202ENST00000352393 VPS54Q9P1Q0 977 aa27.93■■■□□ 2.06
CPNE1-202ENST00000352393 TEX33O43247 280 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 KRT2P35908 639 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 MTF1Q14872 753 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 EARS2Q5JPH6 523 aaKnown RBP27.92■■■□□ 2.06
CPNE1-202ENST00000352393 ADGRA1Q86SQ6 560 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 PAGE5Q96GU1 130 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 EPSTI1Q96J88 318 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 LRP2BPQ9P2M1 347 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 DOT1LQ8TEK3 1739 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 KAT6BQ8WYB5 2073 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 CACNA1SQ13698 1873 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 SEC31AO94979 1220 aaKnown RBP27.92■■■□□ 2.06
CPNE1-202ENST00000352393 CCDC175P0C221 793 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 XBP1P17861 261 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 UBXN6Q9BZV1 441 aa27.92■■■□□ 2.06
CPNE1-202ENST00000352393 NAA15Q9BXJ9 866 aaKnown RBP27.91■■■□□ 2.06
CPNE1-202ENST00000352393 EPC1Q9H2F5 836 aa27.91■■■□□ 2.06
CPNE1-202ENST00000352393 ADD3Q9UEY8 706 aaKnown RBP27.91■■■□□ 2.06
CPNE1-202ENST00000352393 SOWAHDA6NJG2 315 aa27.91■■■□□ 2.06
CPNE1-202ENST00000352393 CYP7A1P22680 504 aa27.91■■■□□ 2.06
CPNE1-202ENST00000352393 AKAP17AQ02040 695 aaKnown RBP27.91■■■□□ 2.06
CPNE1-202ENST00000352393 DPYDQ12882 1025 aa27.91■■■□□ 2.06
CPNE1-202ENST00000352393 KARSQ15046 597 aaKnown RBP27.91■■■□□ 2.06
CPNE1-202ENST00000352393 CC2D1AQ6P1N0 951 aaPredicted RBP27.91■■■□□ 2.06
CPNE1-202ENST00000352393 SDR42E1Q8WUS8 393 aa27.91■■■□□ 2.06
CPNE1-202ENST00000352393 SYMPKQ92797 1274 aaKnown RBP27.91■■■□□ 2.06
CPNE1-202ENST00000352393 FERMT2Q96AC1 680 aa27.91■■■□□ 2.06
CPNE1-202ENST00000352393 BAZ2AQ9UIF9 1905 aaKnown RBP27.9■■■□□ 2.06
CPNE1-202ENST00000352393 WNK3Q9BYP7 1800 aa27.9■■■□□ 2.06
CPNE1-202ENST00000352393 KDM4FA0A1W2PPD8 638 aa27.9■■■□□ 2.06
CPNE1-202ENST00000352393 SEMA3EO15041 775 aa27.9■■■□□ 2.06
CPNE1-202ENST00000352393 PRPF3O43395 683 aaKnown RBP27.9■■■□□ 2.06
CPNE1-202ENST00000352393 TBC1D8O95759 1140 aa27.9■■■□□ 2.06
CPNE1-202ENST00000352393 BMP15O95972 392 aa27.9■■■□□ 2.06
CPNE1-202ENST00000352393 EIF5P55010 431 aaKnown RBP27.9■■■□□ 2.06
CPNE1-202ENST00000352393 ENAHQ8N8S7 591 aaPredicted RBP27.9■■■□□ 2.06
CPNE1-202ENST00000352393 RABGGTAQ92696 567 aa27.9■■■□□ 2.06
CPNE1-202ENST00000352393 COL4A1P02462 1669 aa27.9■■■□□ 2.06
CPNE1-202ENST00000352393 RREB1Q92766 1687 aa27.9■■■□□ 2.06
CPNE1-202ENST00000352393 AFMP43652 599 aa27.89■■■□□ 2.06
CPNE1-202ENST00000352393 TEX35Q5T0J7 233 aa27.89■■■□□ 2.06
CPNE1-202ENST00000352393 RAD9BQ6WBX8 426 aa27.89■■■□□ 2.06
CPNE1-202ENST00000352393 GSDMAQ96QA5 445 aa27.89■■■□□ 2.06
CPNE1-202ENST00000352393 ADGRG1Q9Y653 693 aa27.89■■■□□ 2.06
CPNE1-202ENST00000352393 MINDY4BA8MYZ0 360 aa27.89■■■□□ 2.05
CPNE1-202ENST00000352393 IGHMBP2P38935 993 aaKnown RBP27.89■■■□□ 2.05
CPNE1-202ENST00000352393 CCDC152Q4G0S7 254 aa27.89■■■□□ 2.05
CPNE1-202ENST00000352393 IGSF22Q8N9C0 903 aa27.89■■■□□ 2.05
CPNE1-202ENST00000352393 TNFRSF25Q93038 417 aa27.89■■■□□ 2.05
CPNE1-202ENST00000352393 WNT7AO00755 349 aa27.88■■■□□ 2.05
CPNE1-202ENST00000352393 RBL2Q08999 1139 aa27.88■■■□□ 2.05
CPNE1-202ENST00000352393 CCDC12Q8WUD4 166 aaPredicted RBP27.88■■■□□ 2.05
CPNE1-202ENST00000352393 ZSCAN10Q96SZ4 725 aaPredicted RBP27.88■■■□□ 2.05
CPNE1-202ENST00000352393 BTG4Q9NY30 223 aa27.88■■■□□ 2.05
CPNE1-202ENST00000352393 COL1A1P02452 1464 aaPredicted RBP27.88■■■□□ 2.05
CPNE1-202ENST00000352393 CCDC66A2RUB6 948 aa27.88■■■□□ 2.05
CPNE1-202ENST00000352393 PPP1R3GB7ZBB8 358 aa27.88■■■□□ 2.05
CPNE1-202ENST00000352393 SMIM22K7EJ46 135 aa27.88■■■□□ 2.05
CPNE1-202ENST00000352393 SASH3O75995 380 aa27.88■■■□□ 2.05
CPNE1-202ENST00000352393 CASP1P29466 404 aa27.88■■■□□ 2.05
CPNE1-202ENST00000352393 CYP2C19P33261 490 aa27.88■■■□□ 2.05
CPNE1-202ENST00000352393 KLHL10Q6JEL2 608 aa27.88■■■□□ 2.05
CPNE1-202ENST00000352393 GOLGA1Q92805 767 aa27.88■■■□□ 2.05
CPNE1-202ENST00000352393 ZNF804BA4D1E1 1349 aa27.87■■■□□ 2.05
CPNE1-202ENST00000352393 MYH13Q9UKX3 1938 aa27.87■■■□□ 2.05
CPNE1-202ENST00000352393 MAGEB6P1A0A0J9YX57 407 aa27.87■■■□□ 2.05
CPNE1-202ENST00000352393 MFAP3LO75121 409 aa27.87■■■□□ 2.05
CPNE1-202ENST00000352393 PRDM1O75626 825 aa27.87■■■□□ 2.05
CPNE1-202ENST00000352393 STX17P56962 302 aa27.87■■■□□ 2.05
CPNE1-202ENST00000352393 CHRNDQ07001 517 aa27.87■■■□□ 2.05
CPNE1-202ENST00000352393 PPFIBP1Q86W92 1011 aa27.87■■■□□ 2.05
CPNE1-202ENST00000352393 CTAGE1Q96RT6 745 aa27.87■■■□□ 2.05
CPNE1-202ENST00000352393 SCN7AQ01118 1682 aa27.87■■■□□ 2.05
CPNE1-202ENST00000352393 PLEKHA8P1O95397 391 aa27.86■■■□□ 2.05
CPNE1-202ENST00000352393 FECHP22830 423 aa27.86■■■□□ 2.05
CPNE1-202ENST00000352393 NPY5RQ15761 445 aa27.86■■■□□ 2.05
CPNE1-202ENST00000352393 RIOK1Q9BRS2 568 aaKnown RBP27.86■■■□□ 2.05
CPNE1-202ENST00000352393 RBM28Q9NW13 759 aaKnown RBP27.86■■■□□ 2.05
CPNE1-202ENST00000352393 PARD6BQ9BYG5 372 aa27.85■■■□□ 2.05
CPNE1-202ENST00000352393 IRX2Q9BZI1 471 aaPredicted RBP27.85■■■□□ 2.05
CPNE1-202ENST00000352393 ITIH6Q6UXX5 1313 aa27.85■■■□□ 2.05
CPNE1-202ENST00000352393 COL14A1Q05707 1796 aaKnown RBP27.85■■■□□ 2.05
CPNE1-202ENST00000352393 hCG_1642624A0A1W2PR95 340 aa27.85■■■□□ 2.05
CPNE1-202ENST00000352393 PARP10Q53GL7 1025 aa27.85■■■□□ 2.05
CPNE1-202ENST00000352393 CATIPQ7Z7H3 387 aa27.85■■■□□ 2.05
CPNE1-202ENST00000352393 SMYD4Q8IYR2 804 aaPredicted RBP27.85■■■□□ 2.05
CPNE1-202ENST00000352393 IFIT1BQ5T764 474 aaKnown RBP27.84■■■□□ 2.05
CPNE1-202ENST00000352393 INTS5Q6P9B9 1019 aaKnown RBP27.84■■■□□ 2.05
CPNE1-202ENST00000352393 V9GY48 417 aaPredicted RBP27.84■■■□□ 2.05
CPNE1-202ENST00000352393 MYH8P13535 1937 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms