RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 LAMB2P55268 1798 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 FAM237AA0A1B0GTK4 181 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 COBLO75128 1261 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 UBASH3AP57075 661 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 TROAPQ12815 778 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 ZNF397Q8NF99 534 aaPredicted RBP19.01■□□□□ 0.63
PDAP1-201ENST00000350498 STAMQ92783 540 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 ERO1AQ96HE7 468 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 SETDB2Q96T68 719 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 DCP1AQ9NPI6 582 aaPredicted RBP19.01■□□□□ 0.63
PDAP1-201ENST00000350498 MTMR7Q9Y216 660 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 SERPINC1P01008 464 aa19■□□□□ 0.63
PDAP1-201ENST00000350498 USP17L8P0C7I0 530 aa19■□□□□ 0.63
PDAP1-201ENST00000350498 CFAP100Q494V2 611 aa19■□□□□ 0.63
PDAP1-201ENST00000350498 HOMER1Q86YM7 354 aa19■□□□□ 0.63
PDAP1-201ENST00000350498 FOXP1Q9H334 677 aaPredicted RBP19■□□□□ 0.63
PDAP1-201ENST00000350498 MAN1B1Q9UKM7 699 aa19■□□□□ 0.63
PDAP1-201ENST00000350498 TM4SF1P30408 202 aa19■□□□□ 0.63
PDAP1-201ENST00000350498 SRBD1Q8N5C6 995 aaKnown RBP19■□□□□ 0.63
PDAP1-201ENST00000350498 WASF1Q92558 559 aa19■□□□□ 0.63
PDAP1-201ENST00000350498 NLRP3Q96P20 1036 aa19■□□□□ 0.63
PDAP1-201ENST00000350498 DNAI1Q9UI46 699 aa19■□□□□ 0.63
PDAP1-201ENST00000350498 NID2Q14112 1375 aa19■□□□□ 0.63
PDAP1-201ENST00000350498 HIBADHP31937 336 aaKnown RBP18.99■□□□□ 0.63
PDAP1-201ENST00000350498 ZNF174Q15697 407 aa18.99■□□□□ 0.63
PDAP1-201ENST00000350498 ARHGEF1Q92888 912 aaKnown RBP18.99■□□□□ 0.63
PDAP1-201ENST00000350498 DYNLL2Q96FJ2 89 aa18.99■□□□□ 0.63
PDAP1-201ENST00000350498 EPC1Q9H2F5 836 aa18.99■□□□□ 0.63
PDAP1-201ENST00000350498 INTS13Q9NVM9 706 aa18.99■□□□□ 0.63
PDAP1-201ENST00000350498 MORC2Q9Y6X9 1032 aaPredicted RBP18.99■□□□□ 0.63
PDAP1-201ENST00000350498 DUOX1Q9NRD9 1551 aa18.99■□□□□ 0.63
PDAP1-201ENST00000350498 AFMP43652 599 aa18.99■□□□□ 0.63
PDAP1-201ENST00000350498 NPY5RQ15761 445 aa18.99■□□□□ 0.63
PDAP1-201ENST00000350498 ZNF771Q7L3S4 317 aaPredicted RBP18.99■□□□□ 0.63
PDAP1-201ENST00000350498 TMTC2Q8N394 836 aa18.99■□□□□ 0.63
PDAP1-201ENST00000350498 CCDC150Q8NCX0 1101 aa18.99■□□□□ 0.63
PDAP1-201ENST00000350498 NFIXQ14938 502 aa18.98■□□□□ 0.63
PDAP1-201ENST00000350498 POSTNQ15063 836 aa18.98■□□□□ 0.63
PDAP1-201ENST00000350498 RILPL1Q5EBL4 403 aa18.98■□□□□ 0.63
PDAP1-201ENST00000350498 CCDC196A0A1B0GTZ2 297 aa18.98■□□□□ 0.63
PDAP1-201ENST00000350498 MYL5Q02045 173 aa18.98■□□□□ 0.63
PDAP1-201ENST00000350498 DIXDC1Q155Q3 683 aa18.98■□□□□ 0.63
PDAP1-201ENST00000350498 SLC10A5Q5PT55 438 aa18.98■□□□□ 0.63
PDAP1-201ENST00000350498 RASGRP2Q7LDG7 609 aa18.98■□□□□ 0.63
PDAP1-201ENST00000350498 DHX58Q96C10 678 aa18.98■□□□□ 0.63
PDAP1-201ENST00000350498 NARFQ9UHQ1 456 aa18.98■□□□□ 0.63
PDAP1-201ENST00000350498 CATIPQ7Z7H3 387 aa18.97■□□□□ 0.63
PDAP1-201ENST00000350498 SMYD4Q8IYR2 804 aaPredicted RBP18.97■□□□□ 0.63
PDAP1-201ENST00000350498 PHF20Q9BVI0 1012 aa18.97■□□□□ 0.63
PDAP1-201ENST00000350498 BRIP1Q9BX63 1249 aa18.97■□□□□ 0.63
PDAP1-201ENST00000350498 RNF26Q9BY78 433 aaPredicted RBP18.97■□□□□ 0.63
PDAP1-201ENST00000350498 ACTN4O43707 911 aaKnown RBP18.97■□□□□ 0.63
PDAP1-201ENST00000350498 ZPR1O75312 459 aa18.97■□□□□ 0.63
PDAP1-201ENST00000350498 AKAP17AQ02040 695 aaKnown RBP18.97■□□□□ 0.63
PDAP1-201ENST00000350498 L2HGDHQ9H9P8 463 aa18.97■□□□□ 0.63
PDAP1-201ENST00000350498 KCND1Q9NSA2 647 aa18.97■□□□□ 0.63
PDAP1-201ENST00000350498 SCN7AQ01118 1682 aa18.96■□□□□ 0.63
PDAP1-201ENST00000350498 IKBKBO14920 756 aa18.96■□□□□ 0.63
PDAP1-201ENST00000350498 SLFN14P0C7P3 912 aa18.96■□□□□ 0.63
PDAP1-201ENST00000350498 TPM4P67936 248 aa18.96■□□□□ 0.63
PDAP1-201ENST00000350498 CCDC93Q567U6 631 aa18.96■□□□□ 0.63
PDAP1-201ENST00000350498 SAMSN1Q9NSI8 373 aaKnown RBP18.96■□□□□ 0.63
PDAP1-201ENST00000350498 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDAP1-201ENST00000350498 SRPRBQ9Y5M8 271 aaKnown RBP18.96■□□□□ 0.63
PDAP1-201ENST00000350498 IQCA1Q86XH1 822 aa18.96■□□□□ 0.63
PDAP1-201ENST00000350498 SLC44A5Q8NCS7 719 aa18.96■□□□□ 0.63
PDAP1-201ENST00000350498 CCNL1Q9UK58 526 aaPredicted RBP18.96■□□□□ 0.63
PDAP1-201ENST00000350498 RPS6KA4O75676 772 aa18.95■□□□□ 0.62
PDAP1-201ENST00000350498 CDC25AP30304 524 aa18.95■□□□□ 0.62
PDAP1-201ENST00000350498 TRIM65Q6PJ69 517 aa18.95■□□□□ 0.62
PDAP1-201ENST00000350498 MCM9Q9NXL9 1143 aa18.95■□□□□ 0.62
PDAP1-201ENST00000350498 LTBP4Q8N2S1 1624 aa18.95■□□□□ 0.62
PDAP1-201ENST00000350498 PSDA5PKW4 1024 aaPredicted RBP18.95■□□□□ 0.62
PDAP1-201ENST00000350498 STX17P56962 302 aa18.95■□□□□ 0.62
PDAP1-201ENST00000350498 OLFM4Q6UX06 510 aa18.95■□□□□ 0.62
PDAP1-201ENST00000350498 STAG2Q8N3U4 1231 aa18.95■□□□□ 0.62
PDAP1-201ENST00000350498 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.95■□□□□ 0.622e-7■■■□□ 18.3
PDAP1-201ENST00000350498 PRPF3O43395 683 aaKnown RBP18.94■□□□□ 0.62
PDAP1-201ENST00000350498 KRT2P35908 639 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 ARHGAP29Q52LW3 1261 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 RCSD1Q6JBY9 416 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 TMTC3Q6ZXV5 915 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 RASGRP4Q8TDF6 673 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 SYMPKQ92797 1274 aaKnown RBP18.94■□□□□ 0.62
PDAP1-201ENST00000350498 GPKOWQ92917 476 aaPredicted RBP eCLIP18.94■□□□□ 0.623e-6■■□□□ 11.6
PDAP1-201ENST00000350498 CNTNAP5Q8WYK1 1306 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 CNTNAP4Q9C0A0 1308 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 FGRP09769 529 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 CLCN6P51797 869 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 ADKP55263 362 aaKnown RBP18.94■□□□□ 0.62
PDAP1-201ENST00000350498 KLHL10Q6JEL2 608 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 RGS22Q8NE09 1264 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 CPVLQ9H3G5 476 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 IL17RBQ9NRM6 502 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 ANKIB1Q9P2G1 1089 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 NFE2L3Q9Y4A8 694 aa18.94■□□□□ 0.62
PDAP1-201ENST00000350498 VWA3AA6NCI4 1184 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 USP17L3A6NCW0 530 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 USP17L4A6NCW7 530 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 TRIM75PA6NK02 468 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms