RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 KHNYNO15037 678 aaKnown RBP6.75□□□□□ -1.33
RFC1-201ENST00000349703 DHX16O60231 1041 aaKnown RBP6.75□□□□□ -1.33
RFC1-201ENST00000349703 SMNDC1O75940 238 aaKnown RBP eCLIP6.75□□□□□ -1.331e-46■■■■■ 202.3
RFC1-201ENST00000349703 RHBDL3P58872 404 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 ATP2B3Q16720 1220 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 C16orf86Q6ZW13 317 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 CABP7Q86V35 215 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 BRD9Q9H8M2 597 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 SCHIP1Q9P0W5 487 aaPredicted RBP6.75□□□□□ -1.33
RFC1-201ENST00000349703 UNCXA6NJT0 531 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 SCAND1P57086 179 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 TPM4P67936 248 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 KANK3Q6NY19 840 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 NXPE4Q6UWF7 544 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 EEPD1Q7L9B9 569 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 TMC7Q7Z402 723 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 LRRC47Q8N1G4 583 aaKnown RBP6.75□□□□□ -1.33
RFC1-201ENST00000349703 CNDP2Q96KP4 475 aaKnown RBP6.75□□□□□ -1.33
RFC1-201ENST00000349703 ZFYVE1Q9HBF4 777 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 AS3MTQ9HBK9 375 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 HAUS2Q9NVX0 235 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 OGFRQ9NZT2 677 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 USP19O94966 1318 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 WDR33Q9C0J8 1336 aaKnown RBP6.75□□□□□ -1.33
RFC1-201ENST00000349703 FAM155AB1AL88 458 aaPredicted RBP6.75□□□□□ -1.33
RFC1-201ENST00000349703 PPM1BO75688 479 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 KRT33BQ14525 404 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 SETDB1Q15047 1291 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 KIAA1211LQ6NV74 962 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 HELQQ8TDG4 1101 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 NSUN5Q96P11 429 aaKnown RBP6.75□□□□□ -1.33
RFC1-201ENST00000349703 PHACTR1Q9C0D0 580 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 PCDH12Q9NPG4 1184 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 CEP126Q9P2H0 1117 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 TMEM127O75204 238 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 GYS2P54840 703 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 NOLC1Q14978 699 aaKnown RBP eCLIP6.75□□□□□ -1.33
RFC1-201ENST00000349703 ACAP1Q15027 740 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 IQCDQ96DY2 449 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 EXOC2Q96KP1 924 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 CCDC43Q96MW1 224 aaKnown RBP6.75□□□□□ -1.33
RFC1-201ENST00000349703 AP1M1Q9BXS5 423 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 KBTBD4Q9NVX7 518 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 SCAF8Q9UPN6 1271 aaKnown RBP6.75□□□□□ -1.33
RFC1-201ENST00000349703 SIK3Q9Y2K2 1263 aa6.75□□□□□ -1.33
RFC1-201ENST00000349703 BCORL1Q5H9F3 1711 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 RGS10O43665 173 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 CD2BP2O95400 341 aaKnown RBP6.74□□□□□ -1.33
RFC1-201ENST00000349703 ARL3P36405 182 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 CCT2P78371 535 aaKnown RBP6.74□□□□□ -1.33
RFC1-201ENST00000349703 HP1BP3Q5SSJ5 553 aaPredicted RBP6.74□□□□□ -1.33
RFC1-201ENST00000349703 CCDC30Q5VVM6 783 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 CEP128Q6ZU80 1094 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 RFX8Q6ZV50 586 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 SLC6A16Q9GZN6 736 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 ZIM2Q9NZV7 527 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 MOSPD1Q9UJG1 213 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 CDV3Q9UKY7 258 aaKnown RBP6.74□□□□□ -1.33
RFC1-201ENST00000349703 SHANK2Q9UPX8 1470 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 HMX3A6NHT5 357 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 CD46P15529 392 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 ORC1Q13415 861 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 SMAD1Q15797 465 aaKnown RBP6.74□□□□□ -1.33
RFC1-201ENST00000349703 PROX2Q3B8N5 592 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 JAKMIP3Q5VZ66 844 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 WNK4Q96J92 1243 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 STRIP2Q9ULQ0 834 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 ABCC11Q96J66 1382 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 EIF4A3P38919 411 aaKnown RBP6.74□□□□□ -1.33
RFC1-201ENST00000349703 IGHMBP2P38935 993 aaKnown RBP6.74□□□□□ -1.33
RFC1-201ENST00000349703 GCGRP47871 477 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 ADCK5Q3MIX3 580 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 CCDC183Q5T5S1 534 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 MSL1Q68DK7 614 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 TRMT2AQ8IZ69 625 aaKnown RBP6.74□□□□□ -1.33
RFC1-201ENST00000349703 MSANTD4Q8NCY6 345 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 CSRNP2Q9H175 543 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 ZNF395Q9H8N7 513 aaPredicted RBP6.74□□□□□ -1.33
RFC1-201ENST00000349703 SLC5A4Q9NY91 659 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 DDX56Q9NY93 547 aaKnown RBP6.74□□□□□ -1.33
RFC1-201ENST00000349703 PCDHGA10Q9Y5H3 936 aa6.74□□□□□ -1.33
RFC1-201ENST00000349703 ERBB4Q15303 1308 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 FIGNL2A6NMB9 653 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 LILRB3O75022 631 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 CREMQ03060 361 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 LONRF1Q17RB8 773 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 LUZP1Q86V48 1076 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 MGARPQ8TDB4 240 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 CLP1Q92989 425 aaKnown RBP6.73□□□□□ -1.33
RFC1-201ENST00000349703 CDADC1Q9BWV3 514 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 TUBB1Q9H4B7 451 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 KDM6BO15054 1643 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 ZNF521Q96K83 1311 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 GOLGA6L19H0YKK7 550 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 KIF2AO00139 706 aaPredicted RBP6.73□□□□□ -1.33
RFC1-201ENST00000349703 ACBD5Q5T8D3 534 aaPredicted RBP6.73□□□□□ -1.33
RFC1-201ENST00000349703 VHLLQ6RSH7 139 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 USP53Q70EK8 1073 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 APPL2Q8NEU8 664 aa6.73□□□□□ -1.33
RFC1-201ENST00000349703 PMEPA1Q969W9 287 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms