RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CYP2C8P10632 490 aa26.38■■□□□ 1.81
SNX3-202ENST00000349379 KIAA1683Q9H0B3 1180 aa26.38■■□□□ 1.81
SNX3-202ENST00000349379 EMILIN3Q9NT22 766 aa26.38■■□□□ 1.81
SNX3-202ENST00000349379 ZMYM6O95789 1325 aa26.38■■□□□ 1.81
SNX3-202ENST00000349379 MPHOSPH10O00566 681 aaKnown RBP26.37■■□□□ 1.81
SNX3-202ENST00000349379 CENPBP07199 599 aaPredicted RBP26.37■■□□□ 1.81
SNX3-202ENST00000349379 RASA1P20936 1047 aa26.37■■□□□ 1.81
SNX3-202ENST00000349379 ACER1Q8TDN7 264 aa26.37■■□□□ 1.81
SNX3-202ENST00000349379 ERO1AQ96HE7 468 aa26.37■■□□□ 1.81
SNX3-202ENST00000349379 PARP14Q460N5 1801 aa26.37■■□□□ 1.81
SNX3-202ENST00000349379 HSPD1P10809 573 aaKnown RBP26.36■■□□□ 1.81
SNX3-202ENST00000349379 BCRP11274 1271 aa26.36■■□□□ 1.81
SNX3-202ENST00000349379 HOXA7P31268 230 aaPredicted RBP26.36■■□□□ 1.81
SNX3-202ENST00000349379 CAP1Q01518 475 aa26.36■■□□□ 1.81
SNX3-202ENST00000349379 PPARAQ07869 468 aa26.36■■□□□ 1.81
SNX3-202ENST00000349379 USP17L2Q6R6M4 530 aa26.36■■□□□ 1.81
SNX3-202ENST00000349379 MCOLN1Q9GZU1 580 aa26.36■■□□□ 1.81
SNX3-202ENST00000349379 DIAPH3Q9NSV4 1193 aa26.36■■□□□ 1.81
SNX3-202ENST00000349379 TMOD4Q9NZQ9 345 aa26.36■■□□□ 1.81
SNX3-202ENST00000349379 RLFQ13129 1914 aa26.35■■□□□ 1.81
SNX3-202ENST00000349379 NEFLP07196 543 aa26.35■■□□□ 1.81
SNX3-202ENST00000349379 SIAH1Q8IUQ4 282 aa26.35■■□□□ 1.81
SNX3-202ENST00000349379 CD99L2Q8TCZ2 262 aa26.35■■□□□ 1.81
SNX3-202ENST00000349379 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.35■■□□□ 1.81
SNX3-202ENST00000349379 PNMA3Q9UL41 463 aa26.35■■□□□ 1.81
SNX3-202ENST00000349379 A0A1W2PRG0 241 aa26.34■■□□□ 1.81
SNX3-202ENST00000349379 PABPC4Q13310 644 aaKnown RBP eCLIP26.34■■□□□ 1.81
SNX3-202ENST00000349379 CWC27Q6UX04 472 aaKnown RBP26.34■■□□□ 1.81
SNX3-202ENST00000349379 FEZ1Q99689 392 aa26.34■■□□□ 1.81
SNX3-202ENST00000349379 CPA4Q9UI42 421 aa26.34■■□□□ 1.81
SNX3-202ENST00000349379 ANAPC4Q9UJX5 808 aa26.34■■□□□ 1.81
SNX3-202ENST00000349379 DOCK3Q8IZD9 2030 aa26.33■■□□□ 1.81
SNX3-202ENST00000349379 USP14P54578 494 aa26.33■■□□□ 1.81
SNX3-202ENST00000349379 MFAP1P55081 439 aaKnown RBP26.33■■□□□ 1.81
SNX3-202ENST00000349379 CLEC10AQ8IUN9 316 aa26.33■■□□□ 1.81
SNX3-202ENST00000349379 ASCC2Q9H1I8 757 aaPredicted RBP26.33■■□□□ 1.81
SNX3-202ENST00000349379 MKNK2Q9HBH9 465 aa26.33■■□□□ 1.81
SNX3-202ENST00000349379 ZNF287Q9HBT7 754 aa26.33■■□□□ 1.81
SNX3-202ENST00000349379 FGAP02671 866 aa26.32■■□□□ 1.8
SNX3-202ENST00000349379 ICA1Q05084 483 aa26.32■■□□□ 1.8
SNX3-202ENST00000349379 PKN2Q16513 984 aaKnown RBP26.32■■□□□ 1.8
SNX3-202ENST00000349379 OTOP1Q7RTM1 612 aa26.32■■□□□ 1.8
SNX3-202ENST00000349379 STK11IPQ8N1F8 1099 aa26.32■■□□□ 1.8
SNX3-202ENST00000349379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.32■■□□□ 1.8
SNX3-202ENST00000349379 PLIN4Q96Q06 1357 aa26.32■■□□□ 1.8
SNX3-202ENST00000349379 OSBPP22059 807 aa26.31■■□□□ 1.8
SNX3-202ENST00000349379 LACTBP83111 547 aaPredicted RBP26.31■■□□□ 1.8
SNX3-202ENST00000349379 CCDC136Q96JN2 1154 aa26.31■■□□□ 1.8
SNX3-202ENST00000349379 KANSL2Q9H9L4 492 aa26.31■■□□□ 1.8
SNX3-202ENST00000349379 TMX2Q9Y320 296 aa26.31■■□□□ 1.8
SNX3-202ENST00000349379 IGKV6D-41A0A0C4DH26 115 aa26.3■■□□□ 1.8
SNX3-202ENST00000349379 SLC3A2P08195 630 aaKnown RBP26.3■■□□□ 1.8
SNX3-202ENST00000349379 PDE4BQ07343 736 aa26.3■■□□□ 1.8
SNX3-202ENST00000349379 ZYXQ15942 572 aaKnown RBP26.3■■□□□ 1.8
SNX3-202ENST00000349379 SMCR8Q8TEV9 937 aaPredicted RBP26.3■■□□□ 1.8
SNX3-202ENST00000349379 IL25Q9H293 177 aa26.3■■□□□ 1.8
SNX3-202ENST00000349379 ARHGEF10LQ9HCE6 1279 aa26.3■■□□□ 1.8
SNX3-202ENST00000349379 PRDM1O75626 825 aa26.29■■□□□ 1.8
SNX3-202ENST00000349379 FGRP09769 529 aa26.29■■□□□ 1.8
SNX3-202ENST00000349379 VCAM1P19320 739 aa26.29■■□□□ 1.8
SNX3-202ENST00000349379 ABHD8Q96I13 439 aa26.29■■□□□ 1.8
SNX3-202ENST00000349379 TRIM17Q9Y577 477 aa26.29■■□□□ 1.8
SNX3-202ENST00000349379 TACC3Q9Y6A5 838 aa26.29■■□□□ 1.8
SNX3-202ENST00000349379 RAD50Q92878 1312 aa26.29■■□□□ 1.8
SNX3-202ENST00000349379 A0A0G2JMZ2 1700 aa26.28■■□□□ 1.8
SNX3-202ENST00000349379 EEF2P13639 858 aaKnown RBP26.28■■□□□ 1.8
SNX3-202ENST00000349379 CHMLP26374 656 aa26.28■■□□□ 1.8
SNX3-202ENST00000349379 CTGFP29279 349 aa26.28■■□□□ 1.8
SNX3-202ENST00000349379 GCLCP48506 637 aaPredicted RBP26.28■■□□□ 1.8
SNX3-202ENST00000349379 SKAP1Q86WV1 359 aa26.28■■□□□ 1.8
SNX3-202ENST00000349379 ZNF444Q8N0Y2 327 aaPredicted RBP26.28■■□□□ 1.8
SNX3-202ENST00000349379 EFCC1Q9HA90 598 aa26.28■■□□□ 1.8
SNX3-202ENST00000349379 IRX3P78415 501 aaPredicted RBP26.27■■□□□ 1.8
SNX3-202ENST00000349379 CTDSPL2Q05D32 466 aa26.27■■□□□ 1.8
SNX3-202ENST00000349379 FAM110CQ1W6H9 321 aa26.27■■□□□ 1.8
SNX3-202ENST00000349379 FBXO46Q6PJ61 603 aaPredicted RBP26.27■■□□□ 1.8
SNX3-202ENST00000349379 DSCC1Q9BVC3 393 aa26.27■■□□□ 1.8
SNX3-202ENST00000349379 ARHGAP39Q9C0H5 1083 aa26.27■■□□□ 1.8
SNX3-202ENST00000349379 SH2D4AQ9H788 454 aa26.27■■□□□ 1.8
SNX3-202ENST00000349379 USP17L15C9J2P7 530 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 USP17L13C9JLJ4 530 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 USP17L11C9JVI0 530 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 USP17L18D6R9N7 530 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 USP17L22D6RA61 530 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 USP17L17D6RBQ6 530 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 USP17L19D6RCP7 530 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 USP17L20D6RJB6 530 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 USP17L24Q0WX57 530 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 KIAA1755Q5JYT7 1200 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 ERICH6BQ5W0A0 696 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 CATSPERGQ6ZRH7 1159 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 NEDD1Q8NHV4 660 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 P2RX7Q99572 595 aaKnown RBP26.26■■□□□ 1.79
SNX3-202ENST00000349379 VCPKMTQ9H867 229 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 NYAP2Q9P242 653 aa26.26■■□□□ 1.79
SNX3-202ENST00000349379 ORC4O43929 436 aa26.25■■□□□ 1.79
SNX3-202ENST00000349379 HERVK_113P62684 666 aa26.25■■□□□ 1.79
SNX3-202ENST00000349379 KIF22Q14807 665 aa26.25■■□□□ 1.79
SNX3-202ENST00000349379 ARHGEF6Q15052 776 aa26.25■■□□□ 1.79
SNX3-202ENST00000349379 LPAR1Q92633 364 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms