RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 GOLGA6L9A6NEM1 432 aa17.66■□□□□ 0.42
TNFSF13-202ENST00000349228 COL1A1P02452 1464 aaPredicted RBP17.66■□□□□ 0.42
TNFSF13-202ENST00000349228 SLFN14P0C7P3 912 aa17.66■□□□□ 0.42
TNFSF13-202ENST00000349228 PLCD1P51178 756 aa17.66■□□□□ 0.42
TNFSF13-202ENST00000349228 DYNLL1P63167 89 aaKnown RBP17.66■□□□□ 0.42
TNFSF13-202ENST00000349228 SPECC1Q5M775 1068 aa17.66■□□□□ 0.42
TNFSF13-202ENST00000349228 CMTR1Q8N1G2 835 aaKnown RBP17.66■□□□□ 0.42
TNFSF13-202ENST00000349228 NLRP3Q96P20 1036 aa17.66■□□□□ 0.42
TNFSF13-202ENST00000349228 ARPP21Q9UBL0 812 aaPredicted RBP17.66■□□□□ 0.42
TNFSF13-202ENST00000349228 V9GY48 417 aaPredicted RBP17.66■□□□□ 0.42
TNFSF13-202ENST00000349228 ARHGAP6O43182 974 aa17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 HIBADHP31937 336 aaKnown RBP17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 GRIN1Q05586 938 aa17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 PDE4BQ07343 736 aa17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 TBX2Q13207 712 aaPredicted RBP17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 SPTY2D1Q68D10 685 aaPredicted RBP17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 CTCFLQ8NI51 663 aaPredicted RBP17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 DPF2Q92785 391 aa17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 CACNA1SQ13698 1873 aa17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 COL5A3P25940 1745 aaPredicted RBP17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 PHLPP2Q6ZVD8 1323 aa17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 USP17L12C9JPN9 530 aa17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 USP17L21D6R901 530 aa17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 LINC00116Q8NCU8 138 aa17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 VPS54Q9P1Q0 977 aa17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 NFE2L3Q9Y4A8 694 aa17.65■□□□□ 0.42
TNFSF13-202ENST00000349228 FOXN1O15353 648 aa17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 ETF1P62495 437 aaKnown RBP17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 CCDC178Q5BJE1 867 aa17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 C3orf67Q6ZVT6 689 aa17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 SH3RF1Q7Z6J0 888 aa17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 GSDMAQ96QA5 445 aa17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 OGFRQ9NZT2 677 aa17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 NARFQ9UHQ1 456 aa17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 ZNF215Q9UL58 517 aaPredicted RBP17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 STX10O60499 249 aa17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 MECOMQ03112 1051 aa17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 SPECC1LQ69YQ0 1117 aa17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 ZNF397Q8NF99 534 aaPredicted RBP17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 CELF1Q92879 486 aaKnown RBP17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 TNFRSF25Q93038 417 aa17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 SRRTQ9BXP5 876 aaKnown RBP17.64■□□□□ 0.41
TNFSF13-202ENST00000349228 PRR29P0C7W0 189 aa17.63■□□□□ 0.41
TNFSF13-202ENST00000349228 KIF5BP33176 963 aa17.63■□□□□ 0.41
TNFSF13-202ENST00000349228 HOMER1Q86YM7 354 aa17.63■□□□□ 0.41
TNFSF13-202ENST00000349228 ZNF384Q8TF68 577 aa17.63■□□□□ 0.41
TNFSF13-202ENST00000349228 SETDB2Q96T68 719 aa17.63■□□□□ 0.41
TNFSF13-202ENST00000349228 DCP1AQ9NPI6 582 aaPredicted RBP17.63■□□□□ 0.41
TNFSF13-202ENST00000349228 KCNQ2O43526 872 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 RPS6KA4O75676 772 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 PLEKHA8P1O95397 391 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 ATP2B1P20020 1258 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 CCDC93Q567U6 631 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 TTC38Q5R3I4 469 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 SPATA1Q5VX52 437 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 SCN7AQ01118 1682 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 A0A1B0GUL6 1792 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 CNTNAP5Q8WYK1 1306 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 CALML3P27482 149 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 ATP2C1P98194 919 aaPredicted RBP17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 TBC1D9BQ66K14 1250 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 SYT10Q6XYQ8 523 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 FAM177A1Q8N128 213 aaPredicted RBP17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 CTAGE1Q96RT6 745 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 SH3GLB2Q9NR46 395 aa17.62■□□□□ 0.41
TNFSF13-202ENST00000349228 DLEC1Q9Y238 1755 aa17.61■□□□□ 0.41
TNFSF13-202ENST00000349228 FMR1Q06787 632 aaKnown RBP eCLIP17.61■□□□□ 0.41
TNFSF13-202ENST00000349228 PDILTQ8N807 584 aa17.61■□□□□ 0.41
TNFSF13-202ENST00000349228 DHX58Q96C10 678 aa17.61■□□□□ 0.41
TNFSF13-202ENST00000349228 SHISA4Q96DD7 197 aa17.61■□□□□ 0.41
TNFSF13-202ENST00000349228 PAGE5Q96GU1 130 aa17.61■□□□□ 0.41
TNFSF13-202ENST00000349228 BAG1Q99933 345 aaPredicted RBP17.61■□□□□ 0.41
TNFSF13-202ENST00000349228 INTS13Q9NVM9 706 aa17.61■□□□□ 0.41
TNFSF13-202ENST00000349228 CYP2D7A0A087X1C5 515 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 SCG2P13521 617 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 NR1I3Q14994 352 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 PFKFB3Q16875 520 aaPredicted RBP17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 NBPF5PQ86XG9 351 aaPredicted RBP17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 ANKS1AQ92625 1134 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 COL4A1P02462 1669 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 A0A1B0GTH6 734 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 TMEM232C9JQI7 657 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 GNAQP50148 359 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 ARL6IP4Q66PJ3 421 aaKnown RBP17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 DGKHQ86XP1 1220 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 TMEM139Q8IV31 216 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 REXO1L1PQ8IX06 675 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 SRBD1Q8N5C6 995 aaKnown RBP17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 IQUBQ8NA54 791 aa17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 SYMPKQ92797 1274 aaKnown RBP17.6■□□□□ 0.41
TNFSF13-202ENST00000349228 ZPR1O75312 459 aa17.59■□□□□ 0.41
TNFSF13-202ENST00000349228 PRDM1O75626 825 aa17.59■□□□□ 0.41
TNFSF13-202ENST00000349228 NLRP5P59047 1200 aa17.59■□□□□ 0.41
TNFSF13-202ENST00000349228 DPYDQ12882 1025 aa17.59■□□□□ 0.41
TNFSF13-202ENST00000349228 NPY5RQ15761 445 aa17.59■□□□□ 0.41
TNFSF13-202ENST00000349228 USP49Q70CQ1 688 aa17.59■□□□□ 0.41
TNFSF13-202ENST00000349228 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
TNFSF13-202ENST00000349228 EPSTI1Q96J88 318 aa17.59■□□□□ 0.41
TNFSF13-202ENST00000349228 PANX2Q96RD6 677 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms