RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 ZNF530Q6P9A1 599 aaPredicted RBP16.08■□□□□ 0.16
RLIM-202ENST00000349225 CYB5R4Q7L1T6 521 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 UBE3BQ7Z3V4 1068 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 AMOTL1Q8IY63 956 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 SAR1BQ9Y6B6 198 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 UBN2Q6ZU65 1347 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 PPP1R3GB7ZBB8 358 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 TDO2P48775 406 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 NBPF14Q5TI25 921 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 SH2D3CQ8N5H7 860 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 TRIML1Q8N9V2 468 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 MIEF2Q96C03 454 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 DACH1Q9UI36 760 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 ITIH6Q6UXX5 1313 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 MAP3K15Q6ZN16 1313 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 SHTN1A0MZ66 631 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 USP8P40818 1118 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 STAG1Q8WVM7 1258 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 LRRC59Q96AG4 307 aaKnown RBP16.07■□□□□ 0.16
RLIM-202ENST00000349225 LTN1O94822 1766 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 C5P01031 1676 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 BTBD18B2RXH4 712 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 MEFVO15553 781 aaPredicted RBP16.07■□□□□ 0.16
RLIM-202ENST00000349225 NDUFA10O95299 355 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 GUCY1A2P33402 732 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 CYP26C1Q6V0L0 522 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 RPAINQ86UA6 219 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 MYL10Q9BUA6 226 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 DMGDHQ9UI17 866 aaKnown RBP16.07■□□□□ 0.16
RLIM-202ENST00000349225 PCDHB6Q9Y5E3 794 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 BCL9LQ86UU0 1499 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 ELF1P32519 619 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 SATB1Q01826 763 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 KRT31Q15323 416 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 AKAP4Q5JQC9 854 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 XAGE3Q8WTP9 111 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 CCDC51Q96ER9 411 aa16.07■□□□□ 0.16
RLIM-202ENST00000349225 ATXN2Q99700 1313 aaKnown RBP16.06■□□□□ 0.16
RLIM-202ENST00000349225 SH2B2O14492 632 aaPredicted RBP16.06■□□□□ 0.16
RLIM-202ENST00000349225 SND1Q7KZF4 910 aaKnown RBP eCLIP16.06■□□□□ 0.16
RLIM-202ENST00000349225 EPN1Q9Y6I3 576 aaPredicted RBP16.06■□□□□ 0.16
RLIM-202ENST00000349225 NDUFAB1O14561 156 aa16.06■□□□□ 0.16
RLIM-202ENST00000349225 DDX58O95786 925 aaKnown RBP16.06■□□□□ 0.16
RLIM-202ENST00000349225 SKOR1P84550 965 aa16.06■□□□□ 0.16
RLIM-202ENST00000349225 PREPLQ4J6C6 727 aaPredicted RBP16.06■□□□□ 0.16
RLIM-202ENST00000349225 JAKMIP2Q96AA8 810 aa16.06■□□□□ 0.16
RLIM-202ENST00000349225 DUSP10Q9Y6W6 482 aa16.06■□□□□ 0.16
RLIM-202ENST00000349225 AFMP43652 599 aa16.06■□□□□ 0.16
RLIM-202ENST00000349225 PPARAQ07869 468 aa16.06■□□□□ 0.16
RLIM-202ENST00000349225 ACTN3Q08043 901 aaPredicted RBP16.06■□□□□ 0.16
RLIM-202ENST00000349225 COPS6Q7L5N1 327 aa16.06■□□□□ 0.16
RLIM-202ENST00000349225 FAM228AQ86W67 206 aa16.06■□□□□ 0.16
RLIM-202ENST00000349225 METTL22Q9BUU2 404 aaPredicted RBP16.06■□□□□ 0.16
RLIM-202ENST00000349225 PUS7LQ9H0K6 701 aaKnown RBP16.06■□□□□ 0.16
RLIM-202ENST00000349225 VPS16Q9H269 839 aa16.06■□□□□ 0.16
RLIM-202ENST00000349225 RASSF9O75901 435 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 IBSPP21815 317 aaPredicted RBP16.05■□□□□ 0.16
RLIM-202ENST00000349225 KRT9P35527 623 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 METAP2P50579 478 aaKnown RBP eCLIP16.05■□□□□ 0.16
RLIM-202ENST00000349225 ATP1A2P50993 1020 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
RLIM-202ENST00000349225 SPRED3Q2MJR0 410 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 NCOA7Q8NI08 942 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 NUP88Q99567 741 aaPredicted RBP16.05■□□□□ 0.16
RLIM-202ENST00000349225 LACRTQ9GZZ8 138 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 FAM184BQ9ULE4 1060 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 AFDNP55196 1824 aaKnown RBP16.05■□□□□ 0.16
RLIM-202ENST00000349225 FKBP15Q5T1M5 1219 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 WDR59Q6PJI9 974 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 APOA5Q6Q788 366 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 MICU3Q86XE3 530 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 NOSTRINQ8IVI9 506 aa16.05■□□□□ 0.16
RLIM-202ENST00000349225 N4BP2L2Q92802 583 aaPredicted RBP16.05■□□□□ 0.16
RLIM-202ENST00000349225 SIPA1L3O60292 1781 aaPredicted RBP16.05■□□□□ 0.16
RLIM-202ENST00000349225 PAX7P23759 505 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 LRRC1Q9BTT6 524 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 KCNJ14Q9UNX9 436 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 MCM3P25205 808 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 TRDNQ13061 729 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 WLSQ5T9L3 541 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 KCTD16Q68DU8 428 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 LRP10Q7Z4F1 713 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 OTUD6BQ8N6M0 293 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 ATP5J2-PTCD1G3V325 749 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 PTCD1O75127 700 aaKnown RBP16.04■□□□□ 0.16
RLIM-202ENST00000349225 NAP1L1P55209 391 aaKnown RBP16.04■□□□□ 0.16
RLIM-202ENST00000349225 CASP7P55210 303 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 SLC7A5Q01650 507 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 APBA1Q02410 837 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 NEDD9Q14511 834 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 PPP2R5AQ15172 486 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 AIDAQ96BJ3 306 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 EPSTI1Q96J88 318 aa16.04■□□□□ 0.16
RLIM-202ENST00000349225 H0YHG0 523 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 CHUKO15111 745 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 BRD2P25440 801 aaKnown RBP16.03■□□□□ 0.16
RLIM-202ENST00000349225 NR5A1Q13285 461 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms